RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 NLGN2Q8NFZ4 835 aa15.23■□□□□ 0.03
IRF9-211ENST00000560852 C7orf43Q8WVR3 580 aa15.23■□□□□ 0.03
IRF9-211ENST00000560852 MEIS3Q99687 375 aa15.23■□□□□ 0.03
IRF9-211ENST00000560852 A0A0G2JLW4 131 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 EPHA10Q5JZY3 1008 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 C20orf194Q5TEA3 1177 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 TTLL6Q8N841 843 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 ANKRD44Q8N8A2 993 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
IRF9-211ENST00000560852 SUCLG2Q96I99 432 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 ANKRD31Q8N7Z5 1873 aa15.22■□□□□ 0.03
IRF9-211ENST00000560852 GNAI2P04899 355 aa15.21■□□□□ 0.03
IRF9-211ENST00000560852 CHRNA5P30532 468 aa15.21■□□□□ 0.03
IRF9-211ENST00000560852 SUPT16HQ9Y5B9 1047 aaKnown RBP15.21■□□□□ 0.03
IRF9-211ENST00000560852 GRAPQ13588 217 aa15.2■□□□□ 0.02
IRF9-211ENST00000560852 RTL5Q5HYW3 569 aaPredicted RBP15.2■□□□□ 0.02
IRF9-211ENST00000560852 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
IRF9-211ENST00000560852 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
IRF9-211ENST00000560852 DDX46Q7L014 1031 aaKnown RBP15.2■□□□□ 0.02
IRF9-211ENST00000560852 ITPRIPQ8IWB1 547 aa15.2■□□□□ 0.02
IRF9-211ENST00000560852 GRAPLQ8TC17 118 aaPredicted RBP15.2■□□□□ 0.02
IRF9-211ENST00000560852 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
IRF9-211ENST00000560852 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
IRF9-211ENST00000560852 LAMB2P55268 1798 aa15.2■□□□□ 0.02
IRF9-211ENST00000560852 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
IRF9-211ENST00000560852 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
IRF9-211ENST00000560852 DALRD3Q5D0E6 543 aaKnown RBP15.19■□□□□ 0.02
IRF9-211ENST00000560852 RPGRQ92834 1020 aaKnown RBP15.19■□□□□ 0.02
IRF9-211ENST00000560852 BICC1Q9H694 974 aaKnown RBP15.19■□□□□ 0.02
IRF9-211ENST00000560852 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
IRF9-211ENST00000560852 TNRC6CQ9HCJ0 1690 aaKnown RBP15.19■□□□□ 0.02
IRF9-211ENST00000560852 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
IRF9-211ENST00000560852 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
IRF9-211ENST00000560852 SOGA3Q5TF21 947 aa15.18■□□□□ 0.02
IRF9-211ENST00000560852 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
IRF9-211ENST00000560852 SP8Q8IXZ3 490 aa15.18■□□□□ 0.02
IRF9-211ENST00000560852 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
IRF9-211ENST00000560852 GREM2Q9H772 168 aa15.18■□□□□ 0.02
IRF9-211ENST00000560852 BSDC1Q9NW68 430 aaPredicted RBP15.18■□□□□ 0.02
IRF9-211ENST00000560852 DLEC1Q9Y238 1755 aa15.18■□□□□ 0.02
IRF9-211ENST00000560852 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
IRF9-211ENST00000560852 ATP8B2P98198 1209 aa15.17■□□□□ 0.02
IRF9-211ENST00000560852 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
IRF9-211ENST00000560852 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
IRF9-211ENST00000560852 ZNF622Q969S3 477 aaKnown RBP eCLIP15.17■□□□□ 0.02
IRF9-211ENST00000560852 ATP6V0A2Q9Y487 856 aa15.17■□□□□ 0.02
IRF9-211ENST00000560852 LRRFIP2Q9Y608 721 aaKnown RBP15.17■□□□□ 0.02
IRF9-211ENST00000560852 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
IRF9-211ENST00000560852 ITGA6P23229 1130 aa15.16■□□□□ 0.02
IRF9-211ENST00000560852 POLA2Q14181 598 aa15.16■□□□□ 0.02
IRF9-211ENST00000560852 SSH3Q8TE77 659 aa15.16■□□□□ 0.02
IRF9-211ENST00000560852 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
IRF9-211ENST00000560852 COPRSQ9NQ92 184 aa15.16■□□□□ 0.02
IRF9-211ENST00000560852 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
IRF9-211ENST00000560852 CCDC57Q2TAC2 916 aa15.15■□□□□ 0.02
IRF9-211ENST00000560852 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
IRF9-211ENST00000560852 VPS33BQ9H267 617 aa15.15■□□□□ 0.02
IRF9-211ENST00000560852 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
IRF9-211ENST00000560852 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
IRF9-211ENST00000560852 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
IRF9-211ENST00000560852 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
IRF9-211ENST00000560852 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
IRF9-211ENST00000560852 PTPN12Q05209 780 aaKnown RBP15.14■□□□□ 0.01
IRF9-211ENST00000560852 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
IRF9-211ENST00000560852 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
IRF9-211ENST00000560852 RTFDC1Q9BY42 306 aaPredicted RBP15.14■□□□□ 0.01
IRF9-211ENST00000560852 CIAO1O76071 339 aa15.13■□□□□ 0.01
IRF9-211ENST00000560852 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
IRF9-211ENST00000560852 PSMD1Q99460 953 aa15.13■□□□□ 0.01
IRF9-211ENST00000560852 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
IRF9-211ENST00000560852 RIPOR2Q9Y4F9 1068 aa15.13■□□□□ 0.01
IRF9-211ENST00000560852 PPEF1O14829 653 aaPredicted RBP15.12■□□□□ 0.01
IRF9-211ENST00000560852 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
IRF9-211ENST00000560852 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
IRF9-211ENST00000560852 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
IRF9-211ENST00000560852 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
IRF9-211ENST00000560852 ZBTB22O15209 634 aa15.11■□□□□ 0.01
IRF9-211ENST00000560852 SRGAP3O43295 1099 aa15.11■□□□□ 0.01
IRF9-211ENST00000560852 CCDC93Q567U6 631 aa15.11■□□□□ 0.01
IRF9-211ENST00000560852 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
IRF9-211ENST00000560852 CRBNQ96SW2 442 aa15.11■□□□□ 0.01
IRF9-211ENST00000560852 BCS1LQ9Y276 419 aa15.11■□□□□ 0.01
IRF9-211ENST00000560852 PNMA6EA0A0J9YXQ4 647 aa15.1■□□□□ 0.01
IRF9-211ENST00000560852 C21orf2O43822 256 aa15.1■□□□□ 0.01
IRF9-211ENST00000560852 LDHAL6AQ6ZMR3 332 aa15.1■□□□□ 0.01
IRF9-211ENST00000560852 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
IRF9-211ENST00000560852 EYA2O00167 538 aa15.09■□□□□ 0.01
IRF9-211ENST00000560852 C15orf52Q6ZUT6 534 aaKnown RBP15.09■□□□□ 0.01
IRF9-211ENST00000560852 ATG9AQ7Z3C6 839 aa15.09■□□□□ 0.01
IRF9-211ENST00000560852 CCDC85AQ96PX6 553 aaPredicted RBP15.09■□□□□ 0.01
IRF9-211ENST00000560852 MPHOSPH8Q99549 860 aa15.09■□□□□ 0.01
IRF9-211ENST00000560852 MROH5Q6ZUA9 1318 aa15.09■□□□□ 0.01
IRF9-211ENST00000560852 MYH3P11055 1940 aa15.09■□□□□ 0.01
IRF9-211ENST00000560852 COL4A1P02462 1669 aa15.09■□□□□ 0.01
IRF9-211ENST00000560852 SLX4Q8IY92 1834 aa15.08■□□□□ 0.01
IRF9-211ENST00000560852 HMMRO75330 724 aa15.08■□□□□ 0
IRF9-211ENST00000560852 IL15P40933 162 aaPredicted RBP15.08■□□□□ 0
IRF9-211ENST00000560852 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms