RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 PCDH10Q9P2E7 1040 aa21.5■■□□□ 1.03
HMG20A-210ENST00000560498 GJA3Q9Y6H8 435 aa21.5■■□□□ 1.03
HMG20A-210ENST00000560498 LAMB2P55268 1798 aa21.49■■□□□ 1.03
HMG20A-210ENST00000560498 PPIP5K2O43314 1243 aa21.49■■□□□ 1.03
HMG20A-210ENST00000560498 EPHX2P34913 555 aa21.49■■□□□ 1.03
HMG20A-210ENST00000560498 EIF6P56537 245 aaKnown RBP21.49■■□□□ 1.03
HMG20A-210ENST00000560498 GOLGA2Q08379 1002 aa21.49■■□□□ 1.03
HMG20A-210ENST00000560498 AOC3Q16853 763 aa21.49■■□□□ 1.03
HMG20A-210ENST00000560498 EAPPQ56P03 285 aaPredicted RBP21.49■■□□□ 1.03
HMG20A-210ENST00000560498 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
HMG20A-210ENST00000560498 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
HMG20A-210ENST00000560498 SF3B3Q15393 1217 aaKnown RBP21.48■■□□□ 1.03
HMG20A-210ENST00000560498 CCDC30Q5VVM6 783 aa21.48■■□□□ 1.03
HMG20A-210ENST00000560498 LDHDQ86WU2 507 aa21.48■■□□□ 1.03
HMG20A-210ENST00000560498 MYD88Q99836 296 aa21.48■■□□□ 1.03
HMG20A-210ENST00000560498 RTFDC1Q9BY42 306 aaPredicted RBP21.48■■□□□ 1.03
HMG20A-210ENST00000560498 IRS4O14654 1257 aaPredicted RBP21.47■■□□□ 1.03
HMG20A-210ENST00000560498 LBX1P52954 281 aa21.47■■□□□ 1.03
HMG20A-210ENST00000560498 DPP8Q6V1X1 898 aaPredicted RBP21.47■■□□□ 1.03
HMG20A-210ENST00000560498 NIM1KQ8IY84 436 aa21.47■■□□□ 1.03
HMG20A-210ENST00000560498 MPNDQ8N594 471 aa21.47■■□□□ 1.03
HMG20A-210ENST00000560498 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
HMG20A-210ENST00000560498 ABHD8Q96I13 439 aa21.47■■□□□ 1.03
HMG20A-210ENST00000560498 SCN4AP35499 1836 aa21.46■■□□□ 1.03
HMG20A-210ENST00000560498 JARID2Q92833 1246 aaPredicted RBP21.46■■□□□ 1.03
HMG20A-210ENST00000560498 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
HMG20A-210ENST00000560498 TAF1P21675 1872 aa21.45■■□□□ 1.02
HMG20A-210ENST00000560498 SUPT20HQ8NEM7 779 aa21.45■■□□□ 1.02
HMG20A-210ENST00000560498 VPS33BQ9H267 617 aa21.45■■□□□ 1.02
HMG20A-210ENST00000560498 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.02
HMG20A-210ENST00000560498 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
HMG20A-210ENST00000560498 ITGBL1O95965 494 aaPredicted RBP21.44■■□□□ 1.02
HMG20A-210ENST00000560498 VEGFBP49765 207 aa21.44■■□□□ 1.02
HMG20A-210ENST00000560498 SCNN1DP51172 638 aa21.44■■□□□ 1.02
HMG20A-210ENST00000560498 ZBTB38Q8NAP3 1195 aaPredicted RBP21.44■■□□□ 1.02
HMG20A-210ENST00000560498 METTL22Q9BUU2 404 aaPredicted RBP21.44■■□□□ 1.02
HMG20A-210ENST00000560498 EPS15P42566 896 aa21.43■■□□□ 1.02
HMG20A-210ENST00000560498 PNMA8AQ86V59 439 aaPredicted RBP21.43■■□□□ 1.02
HMG20A-210ENST00000560498 CCDC191Q8NCU4 936 aa21.43■■□□□ 1.02
HMG20A-210ENST00000560498 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
HMG20A-210ENST00000560498 PASKQ96RG2 1323 aa21.43■■□□□ 1.02
HMG20A-210ENST00000560498 COL4A1P02462 1669 aa21.43■■□□□ 1.02
HMG20A-210ENST00000560498 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
HMG20A-210ENST00000560498 CXCL9Q07325 125 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 KIAA2012Q0VF49 1180 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 IL16Q14005 1332 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 TWISTNBQ3B726 338 aaPredicted RBP21.42■■□□□ 1.02
HMG20A-210ENST00000560498 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
HMG20A-210ENST00000560498 G2E3Q7L622 706 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 TMC4Q7Z404 712 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
HMG20A-210ENST00000560498 MAP1SQ66K74 1059 aaPredicted RBP21.41■■□□□ 1.02
HMG20A-210ENST00000560498 SEC31BQ9NQW1 1179 aa21.41■■□□□ 1.02
HMG20A-210ENST00000560498 WBP1LQ9NX94 342 aa21.41■■□□□ 1.02
HMG20A-210ENST00000560498 CWC25Q9NXE8 425 aaPredicted RBP21.41■■□□□ 1.02
HMG20A-210ENST00000560498 LTBP1Q14766 1721 aa21.41■■□□□ 1.02
HMG20A-210ENST00000560498 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
HMG20A-210ENST00000560498 PCCAP05165 728 aaPredicted RBP21.4■■□□□ 1.02
HMG20A-210ENST00000560498 LMOD1P29536 600 aaPredicted RBP21.4■■□□□ 1.02
HMG20A-210ENST00000560498 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
HMG20A-210ENST00000560498 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
HMG20A-210ENST00000560498 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
HMG20A-210ENST00000560498 ADAMTSL1Q8N6G6 1762 aa21.39■■□□□ 1.01
HMG20A-210ENST00000560498 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
HMG20A-210ENST00000560498 RPS8P62241 208 aaKnown RBP21.39■■□□□ 1.01
HMG20A-210ENST00000560498 GPSM2P81274 684 aa21.39■■□□□ 1.01
HMG20A-210ENST00000560498 MLLT1Q03111 559 aaPredicted RBP21.39■■□□□ 1.01
HMG20A-210ENST00000560498 CNTROBQ8N137 903 aa21.39■■□□□ 1.01
HMG20A-210ENST00000560498 STK31Q9BXU1 1019 aa21.39■■□□□ 1.01
HMG20A-210ENST00000560498 FANCIQ9NVI1 1328 aa21.38■■□□□ 1.01
HMG20A-210ENST00000560498 YDJCA8MPS7 323 aa21.38■■□□□ 1.01
HMG20A-210ENST00000560498 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
HMG20A-210ENST00000560498 HSPA8P11142 646 aaKnown RBP21.38■■□□□ 1.01
HMG20A-210ENST00000560498 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
HMG20A-210ENST00000560498 POLLQ9UGP5 575 aa21.38■■□□□ 1.01
HMG20A-210ENST00000560498 DUOX1Q9NRD9 1551 aa21.38■■□□□ 1.01
HMG20A-210ENST00000560498 PDE8AO60658 829 aa21.37■■□□□ 1.01
HMG20A-210ENST00000560498 RAD17O75943 681 aa21.37■■□□□ 1.01
HMG20A-210ENST00000560498 CIAPIN1Q6FI81 312 aa21.37■■□□□ 1.01
HMG20A-210ENST00000560498 WDR63Q8IWG1 891 aa21.37■■□□□ 1.01
HMG20A-210ENST00000560498 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
HMG20A-210ENST00000560498 GPRC5DQ9NZD1 345 aa21.37■■□□□ 1.01
HMG20A-210ENST00000560498 CCDC85CA6NKD9 419 aa21.36■■□□□ 1.01
HMG20A-210ENST00000560498 TMEM88BA6NKF7 163 aa21.36■■□□□ 1.01
HMG20A-210ENST00000560498 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
HMG20A-210ENST00000560498 GMPSP49915 693 aaPredicted RBP21.36■■□□□ 1.01
HMG20A-210ENST00000560498 GPR101Q96P66 508 aaPredicted RBP21.36■■□□□ 1.01
HMG20A-210ENST00000560498 SPINK5Q9NQ38 1064 aaPredicted RBP21.36■■□□□ 1.01
HMG20A-210ENST00000560498 C6orf229H3BNL8 230 aa21.35■■□□□ 1.01
HMG20A-210ENST00000560498 VAMP4O75379 141 aa21.35■■□□□ 1.01
HMG20A-210ENST00000560498 WASHC4Q2M389 1173 aa21.35■■□□□ 1.01
HMG20A-210ENST00000560498 CWF19L2Q2TBE0 894 aaKnown RBP21.35■■□□□ 1.01
HMG20A-210ENST00000560498 LRRC37AA6NMS7 1700 aa21.35■■□□□ 1.01
HMG20A-210ENST00000560498 HSP90B1P14625 803 aaKnown RBP21.34■■□□□ 1.01
HMG20A-210ENST00000560498 EXOSC9Q06265 439 aaKnown RBP21.34■■□□□ 1.01
HMG20A-210ENST00000560498 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.01
HMG20A-210ENST00000560498 CCDC152Q4G0S7 254 aa21.34■■□□□ 1.01
HMG20A-210ENST00000560498 USP50Q70EL3 339 aaPredicted RBP21.34■■□□□ 1.01
HMG20A-210ENST00000560498 TNIP1Q15025 636 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms