RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 AMIGO3Q86WK7 504 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 TNRC6CQ9HCJ0 1690 aaKnown RBP10.62□□□□□ -0.71
TRAF3-209ENST00000560463 SMARCA5O60264 1052 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-209ENST00000560463 CIAO1O76071 339 aa10.61□□□□□ -0.71
TRAF3-209ENST00000560463 GYS1P13807 737 aa10.61□□□□□ -0.71
TRAF3-209ENST00000560463 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-209ENST00000560463 IFIT5Q13325 482 aaKnown RBP10.61□□□□□ -0.71
TRAF3-209ENST00000560463 SKAP1Q86WV1 359 aa10.61□□□□□ -0.71
TRAF3-209ENST00000560463 PLEKHM2Q8IWE5 1019 aa10.61□□□□□ -0.71
TRAF3-209ENST00000560463 CLASRPQ8N2M8 674 aaKnown RBP10.61□□□□□ -0.71
TRAF3-209ENST00000560463 PA2G4Q9UQ80 394 aaKnown RBP10.61□□□□□ -0.71
TRAF3-209ENST00000560463 MYO5AQ9Y4I1 1855 aaKnown RBP10.61□□□□□ -0.71
TRAF3-209ENST00000560463 AOX1Q06278 1338 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 ANKRD18BA2A2Z9 1011 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 SASH1O94885 1247 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 IL15P40933 162 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-209ENST00000560463 EN1Q05925 392 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-209ENST00000560463 EZH2Q15910 746 aaKnown RBP10.6□□□□□ -0.71
TRAF3-209ENST00000560463 ZNF827Q17R98 1081 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 NBPF5PQ86XG9 351 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-209ENST00000560463 SYNE4Q8N205 404 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 NLGN1Q8N2Q7 840 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 STAP2Q9UGK3 403 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 DLEC1Q9Y238 1755 aa10.6□□□□□ -0.71
TRAF3-209ENST00000560463 SALL3Q9BXA9 1300 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 CCDC88AQ3V6T2 1871 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 FAM177BA6PVY3 158 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 EYA2O00167 538 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 ITGA6P23229 1130 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 TM4SF1P30408 202 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 NFIXQ14938 502 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 SF3B3Q15393 1217 aaKnown RBP10.59□□□□□ -0.71
TRAF3-209ENST00000560463 SLC15A2Q16348 729 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 ERFEQ4G0M1 354 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 BMP2KLQ5H9B9 411 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 TAF7LQ5H9L4 462 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 KLHDC4Q8TBB5 520 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 SIL1Q9H173 461 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 GPR108Q9NPR9 543 aa10.59□□□□□ -0.71
TRAF3-209ENST00000560463 TTC41PQ6P2S7 1318 aa10.58□□□□□ -0.71
TRAF3-209ENST00000560463 PNPLA7Q6ZV29 1317 aa10.58□□□□□ -0.71
TRAF3-209ENST00000560463 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-209ENST00000560463 MX1P20591 662 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 PDE1AP54750 535 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 ATG9AQ7Z3C6 839 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 COL23A1Q86Y22 540 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-209ENST00000560463 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 C16orf71Q8IYS4 520 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-209ENST00000560463 GPATCH3Q96I76 525 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 NLRP3Q96P20 1036 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 GREM2Q9H772 168 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 IL1RAPL2Q9NP60 686 aa10.58□□□□□ -0.72
TRAF3-209ENST00000560463 DOCK2Q92608 1830 aa10.57□□□□□ -0.72
TRAF3-209ENST00000560463 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
TRAF3-209ENST00000560463 TTC22Q5TAA0 569 aa10.57□□□□□ -0.72
TRAF3-209ENST00000560463 LDHAL6AQ6ZMR3 332 aa10.57□□□□□ -0.72
TRAF3-209ENST00000560463 CNBD1Q8NA66 436 aa10.57□□□□□ -0.72
TRAF3-209ENST00000560463 BACH2Q9BYV9 841 aa10.57□□□□□ -0.72
TRAF3-209ENST00000560463 LRRC37AA6NMS7 1700 aa10.57□□□□□ -0.72
TRAF3-209ENST00000560463 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-209ENST00000560463 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 ERC2O15083 957 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 NPHP1O15259 732 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 MSH5O43196 834 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 EIF5BO60841 1220 aaKnown RBP10.56□□□□□ -0.72
TRAF3-209ENST00000560463 SERPINB2P05120 415 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 ST5P78524 1137 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 TFCP2Q12800 502 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-209ENST00000560463 ZNF594Q96JF6 807 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-209ENST00000560463 CDC5LQ99459 802 aaKnown RBP10.56□□□□□ -0.72
TRAF3-209ENST00000560463 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 AKAP2Q9Y2D5 859 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 CHD4Q14839 1912 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 MROH5Q6ZUA9 1318 aa10.56□□□□□ -0.72
TRAF3-209ENST00000560463 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
TRAF3-209ENST00000560463 IGHMBP2P38935 993 aaKnown RBP10.55□□□□□ -0.72
TRAF3-209ENST00000560463 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 LRRC24Q50LG9 513 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 TNNI3KQ59H18 835 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 AACSQ86V21 672 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 OTUD7AQ8TE49 926 aaPredicted RBP10.55□□□□□ -0.72
TRAF3-209ENST00000560463 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
TRAF3-209ENST00000560463 MPHOSPH8Q99549 860 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 CNNM1Q9NRU3 951 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 FPGT-TNNI3KV9GXZ4 949 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 ZNF609O15014 1411 aa10.55□□□□□ -0.72
TRAF3-209ENST00000560463 GLRX3O76003 335 aaKnown RBP10.54□□□□□ -0.72
TRAF3-209ENST00000560463 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
TRAF3-209ENST00000560463 CCDC85AQ96PX6 553 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms