RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 DLL1O00548 723 aa6.99□□□□□ -1.29
SPG11-222ENST00000560435 DEAF1O75398 565 aaPredicted RBP6.99□□□□□ -1.29
SPG11-222ENST00000560435 IDH3AP50213 366 aa6.99□□□□□ -1.29
SPG11-222ENST00000560435 DZIP1LQ8IYY4 767 aaKnown RBP6.99□□□□□ -1.29
SPG11-222ENST00000560435 RASA1P20936 1047 aa6.98□□□□□ -1.29
SPG11-222ENST00000560435 TPRNQ4KMQ1 711 aa6.98□□□□□ -1.29
SPG11-222ENST00000560435 IFT43Q96FT9 208 aa6.98□□□□□ -1.29
SPG11-222ENST00000560435 PCMTD2Q9NV79 361 aa6.98□□□□□ -1.29
SPG11-222ENST00000560435 RARAP10276 462 aa6.97□□□□□ -1.29
SPG11-222ENST00000560435 FSTP19883 344 aa6.97□□□□□ -1.29
SPG11-222ENST00000560435 IGFBP4P22692 258 aa6.97□□□□□ -1.29
SPG11-222ENST00000560435 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
SPG11-222ENST00000560435 ARSDP51689 593 aa6.97□□□□□ -1.29
SPG11-222ENST00000560435 MLLT1Q03111 559 aaPredicted RBP6.97□□□□□ -1.29
SPG11-222ENST00000560435 KRT25Q7Z3Z0 450 aa6.97□□□□□ -1.29
SPG11-222ENST00000560435 SMG9Q9H0W8 520 aaKnown RBP6.97□□□□□ -1.29
SPG11-222ENST00000560435 AKTIPQ9H8T0 292 aa6.97□□□□□ -1.29
SPG11-222ENST00000560435 COL17A1Q9UMD9 1497 aaPredicted RBP6.97□□□□□ -1.29
SPG11-222ENST00000560435 TARSP26639 723 aaKnown RBP6.96□□□□□ -1.3
SPG11-222ENST00000560435 NRLP54845 237 aa6.96□□□□□ -1.3
SPG11-222ENST00000560435 TMEM130Q8N3G9 435 aa6.96□□□□□ -1.3
SPG11-222ENST00000560435 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
SPG11-222ENST00000560435 KLK14Q9P0G3 267 aa6.96□□□□□ -1.3
SPG11-222ENST00000560435 SLC24A1O60721 1099 aa6.95□□□□□ -1.3
SPG11-222ENST00000560435 HINFPQ9BQA5 517 aa6.95□□□□□ -1.3
SPG11-222ENST00000560435 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
SPG11-222ENST00000560435 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
SPG11-222ENST00000560435 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
SPG11-222ENST00000560435 PAX4O43316 350 aa6.94□□□□□ -1.3
SPG11-222ENST00000560435 SASH3O75995 380 aa6.94□□□□□ -1.3
SPG11-222ENST00000560435 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
SPG11-222ENST00000560435 EIF2AK2P19525 551 aaKnown RBP6.94□□□□□ -1.3
SPG11-222ENST00000560435 CD97P48960 835 aa6.94□□□□□ -1.3
SPG11-222ENST00000560435 MAFBQ9Y5Q3 323 aaPredicted RBP6.94□□□□□ -1.3
SPG11-222ENST00000560435 MICAL2O94851 1124 aa6.93□□□□□ -1.3
SPG11-222ENST00000560435 SSTR4P31391 388 aa6.93□□□□□ -1.3
SPG11-222ENST00000560435 DGKZQ13574 1117 aa6.93□□□□□ -1.3
SPG11-222ENST00000560435 LARP1Q6PKG0 1096 aaKnown RBP6.93□□□□□ -1.3
SPG11-222ENST00000560435 Q6ZS46 218 aa6.93□□□□□ -1.3
SPG11-222ENST00000560435 HFE2Q6ZVN8 426 aa6.93□□□□□ -1.3
SPG11-222ENST00000560435 DCAF11Q8TEB1 546 aa6.93□□□□□ -1.3
SPG11-222ENST00000560435 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
SPG11-222ENST00000560435 ALX3O95076 343 aa6.92□□□□□ -1.3
SPG11-222ENST00000560435 EGFRP00533 1210 aa6.92□□□□□ -1.3
SPG11-222ENST00000560435 FLIIQ13045 1269 aa6.92□□□□□ -1.3
SPG11-222ENST00000560435 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
SPG11-222ENST00000560435 PLD4Q96BZ4 506 aa6.92□□□□□ -1.3
SPG11-222ENST00000560435 FMNL2Q96PY5 1086 aa6.92□□□□□ -1.3
SPG11-222ENST00000560435 QTRT2Q9H974 415 aaKnown RBP6.92□□□□□ -1.3
SPG11-222ENST00000560435 TFIP11Q9UBB9 837 aaKnown RBP6.92□□□□□ -1.3
SPG11-222ENST00000560435 GSC2O15499 205 aa6.91□□□□□ -1.3
SPG11-222ENST00000560435 TXKP42681 527 aa6.91□□□□□ -1.3
SPG11-222ENST00000560435 DPYDQ12882 1025 aa6.91□□□□□ -1.3
SPG11-222ENST00000560435 PTK7Q13308 1070 aa6.91□□□□□ -1.3
SPG11-222ENST00000560435 CRTC2Q53ET0 693 aaPredicted RBP6.91□□□□□ -1.3
SPG11-222ENST00000560435 MYO19Q96H55 970 aa6.91□□□□□ -1.3
SPG11-222ENST00000560435 FOXO3O43524 673 aa6.9□□□□□ -1.3
SPG11-222ENST00000560435 PTCD1O75127 700 aaKnown RBP6.9□□□□□ -1.3
SPG11-222ENST00000560435 LGR5O75473 907 aa6.9□□□□□ -1.3
SPG11-222ENST00000560435 HOXD8P13378 290 aaPredicted RBP6.9□□□□□ -1.3
SPG11-222ENST00000560435 C11orf91Q3C1V1 193 aa6.9□□□□□ -1.3
SPG11-222ENST00000560435 RAXQ9Y2V3 346 aa6.9□□□□□ -1.3
SPG11-222ENST00000560435 RTCBQ9Y3I0 505 aaKnown RBP6.9□□□□□ -1.3
SPG11-222ENST00000560435 LOC102724428A0A0B4J2F2 783 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 KIAA1324LA8MWY0 1029 aaPredicted RBP6.89□□□□□ -1.31
SPG11-222ENST00000560435 OPLAHO14841 1288 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 PSAPP07602 524 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 IRAK1P51617 712 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 SIK1P57059 783 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 GDF6Q6KF10 455 aaPredicted RBP6.89□□□□□ -1.31
SPG11-222ENST00000560435 ANKMY2Q8IV38 441 aa6.89□□□□□ -1.31
SPG11-222ENST00000560435 FAM196BA6NMK8 535 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L15C9J2P7 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L10C9JJH3 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L13C9JLJ4 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L12C9JPN9 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L11C9JVI0 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L21D6R901 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L18D6R9N7 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L22D6RA61 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L17D6RBQ6 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L19D6RCP7 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L20D6RJB6 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 J3QW42 95 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 XYLBO75191 536 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 GHRHP01286 108 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 IGLV1-40P01703 118 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 WEE1P30291 646 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 SOX18P35713 384 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 USP17L24Q0WX57 530 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 IL22RA1Q8N6P7 574 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 GLMNQ92990 594 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
SPG11-222ENST00000560435 COBLO75128 1261 aa6.87□□□□□ -1.31
SPG11-222ENST00000560435 GLB1P16278 677 aa6.87□□□□□ -1.31
SPG11-222ENST00000560435 KANK4Q5T7N3 995 aaPredicted RBP6.87□□□□□ -1.31
SPG11-222ENST00000560435 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
SPG11-222ENST00000560435 AGGF1Q8N302 714 aaeCLIP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms