RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 NBPF7P0C2Y1 421 aaPredicted RBP8□□□□□ -1.13
SPG11-221ENST00000560299 CEP85Q6P2H3 762 aa8□□□□□ -1.13
SPG11-221ENST00000560299 SYT17Q9BSW7 474 aa8□□□□□ -1.13
SPG11-221ENST00000560299 BCL2L12Q9HB09 334 aa8□□□□□ -1.13
SPG11-221ENST00000560299 NUP98P52948 1817 aa8□□□□□ -1.13
SPG11-221ENST00000560299 C10orf71Q711Q0 1435 aa8□□□□□ -1.13
SPG11-221ENST00000560299 BCORQ6W2J9 1755 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 CARMIL3Q8ND23 1372 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 POLRMTO00411 1230 aaKnown RBP7.99□□□□□ -1.13
SPG11-221ENST00000560299 IGHDP01880 384 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 MMP10P09238 476 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 GPTP24298 496 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 HLFQ16534 295 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 HSP90AB4PQ58FF6 505 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 UBE3BQ7Z3V4 1068 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 NLRP10Q86W26 655 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 ZNF34Q8IZ26 560 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 ZBTB38Q8NAP3 1195 aaPredicted RBP7.99□□□□□ -1.13
SPG11-221ENST00000560299 TRMT112Q9UI30 125 aaKnown RBP7.99□□□□□ -1.13
SPG11-221ENST00000560299 NIP7Q9Y221 180 aaKnown RBP eCLIP7.99□□□□□ -1.13
SPG11-221ENST00000560299 KDM2BQ8NHM5 1336 aa7.99□□□□□ -1.13
SPG11-221ENST00000560299 SRGAP3O43295 1099 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 PHF14O94880 888 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
SPG11-221ENST00000560299 MTX1Q13505 466 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 NFIXQ14938 502 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 USPL1Q5W0Q7 1092 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 SMC5Q8IY18 1101 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 SETDB2Q96T68 719 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 UTP14AQ9BVJ6 771 aaKnown RBP7.98□□□□□ -1.13
SPG11-221ENST00000560299 BRIP1Q9BX63 1249 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
SPG11-221ENST00000560299 NYXQ9GZU5 481 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 DCTPP1Q9H773 170 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 PPP1R1BQ9UD71 204 aaPredicted RBP7.98□□□□□ -1.13
SPG11-221ENST00000560299 PARP3Q9Y6F1 533 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
SPG11-221ENST00000560299 ANKRD36CQ5JPF3 1778 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 NPHP1O15259 732 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 RAB11FIP3O75154 756 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 TPTE2Q6XPS3 522 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 SIRT2Q8IXJ6 389 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 SSH3Q8TE77 659 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 SUCLG2Q96I99 432 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 PLA2G12BQ9BX93 195 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 BICC1Q9H694 974 aaKnown RBP7.97□□□□□ -1.13
SPG11-221ENST00000560299 SH3TC1Q8TE82 1336 aa7.97□□□□□ -1.13
SPG11-221ENST00000560299 PNMA6EA0A0J9YXQ4 647 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 GRIN3BO60391 1043 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 PDE8AO60658 829 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 SURF6O75683 361 aaKnown RBP7.96□□□□□ -1.14
SPG11-221ENST00000560299 CASP7P55210 303 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 DDR1Q08345 913 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 G3BP1Q13283 466 aaKnown RBP eCLIP7.96□□□□□ -1.14
SPG11-221ENST00000560299 OS9Q13438 667 aaPredicted RBP7.96□□□□□ -1.14
SPG11-221ENST00000560299 RABL6Q3YEC7 729 aaPredicted RBP7.96□□□□□ -1.14
SPG11-221ENST00000560299 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 RTL5Q5HYW3 569 aaPredicted RBP7.96□□□□□ -1.14
SPG11-221ENST00000560299 SLC10A5Q5PT55 438 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 ANKRD45Q5TZF3 282 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 ERC1Q8IUD2 1116 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 FAM89AQ96GI7 184 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.14
SPG11-221ENST00000560299 IRS4O14654 1257 aaPredicted RBP7.95□□□□□ -1.14
SPG11-221ENST00000560299 SERPINB2P05120 415 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 PDE6BP35913 854 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 NUCB1Q02818 461 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 CCDC57Q2TAC2 916 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 CRY2Q49AN0 593 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 TAF7LQ5H9L4 462 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 SUSD4Q5VX71 490 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 LMBR1LQ6UX01 489 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 BICDL1Q6ZP65 573 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 CHD1LQ86WJ1 897 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 NBPF5PQ86XG9 351 aaPredicted RBP7.95□□□□□ -1.14
SPG11-221ENST00000560299 LRRCC1Q9C099 1032 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 CREBZFQ9NS37 354 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 SRP68Q9UHB9 627 aaKnown RBP7.95□□□□□ -1.14
SPG11-221ENST00000560299 UBN2Q6ZU65 1347 aa7.95□□□□□ -1.14
SPG11-221ENST00000560299 FAM177BA6PVY3 158 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 HOXA10P31260 410 aaPredicted RBP7.94□□□□□ -1.14
SPG11-221ENST00000560299 FOXO4P98177 505 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 IFIT5Q13325 482 aaKnown RBP7.94□□□□□ -1.14
SPG11-221ENST00000560299 CCDC152Q4G0S7 254 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 TBC1D9BQ66K14 1250 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 JARID2Q92833 1246 aaPredicted RBP7.94□□□□□ -1.14
SPG11-221ENST00000560299 KIF1BPQ96EK5 621 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 KAZALD1Q96I82 304 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 FBXO3Q9UK99 471 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 NOP58Q9Y2X3 529 aaKnown RBP7.94□□□□□ -1.14
SPG11-221ENST00000560299 KIAA1551Q9HCM1 1747 aa7.94□□□□□ -1.14
SPG11-221ENST00000560299 GOLGB1Q14789 3259 aaKnown RBP7.93□□□□□ -1.14
SPG11-221ENST00000560299 DLEC1Q9Y238 1755 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 ANKRD18BA2A2Z9 1011 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 APBB1O00213 710 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 NTSR2O95665 410 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 CSF1RP07333 972 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 KCNA3P22001 575 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 RGS3P49796 1198 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 CTSWP56202 376 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms