RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 FLIIQ13045 1269 aa19.06■□□□□ 0.64
MEIS3-208ENST00000560253 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
MEIS3-208ENST00000560253 C3orf67Q6ZVT6 689 aa19.06■□□□□ 0.64
MEIS3-208ENST00000560253 SP8Q8IXZ3 490 aa19.06■□□□□ 0.64
MEIS3-208ENST00000560253 VPS33BQ9H267 617 aa19.06■□□□□ 0.64
MEIS3-208ENST00000560253 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
MEIS3-208ENST00000560253 ABCC4O15439 1325 aa19.05■□□□□ 0.64
MEIS3-208ENST00000560253 TNRC6CQ9HCJ0 1690 aaKnown RBP19.05■□□□□ 0.64
MEIS3-208ENST00000560253 FSTL1Q12841 308 aa19.05■□□□□ 0.64
MEIS3-208ENST00000560253 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
MEIS3-208ENST00000560253 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
MEIS3-208ENST00000560253 PDE8AO60658 829 aa19.04■□□□□ 0.64
MEIS3-208ENST00000560253 HSPA1AP0DMV8 641 aaKnown RBP19.04■□□□□ 0.64
MEIS3-208ENST00000560253 HSPA1BP0DMV9 641 aaKnown RBP19.04■□□□□ 0.64
MEIS3-208ENST00000560253 CCDC152Q4G0S7 254 aa19.04■□□□□ 0.64
MEIS3-208ENST00000560253 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
MEIS3-208ENST00000560253 MPNDQ8N594 471 aa19.04■□□□□ 0.64
MEIS3-208ENST00000560253 EIF6P56537 245 aaKnown RBP19.03■□□□□ 0.64
MEIS3-208ENST00000560253 DPP8Q6V1X1 898 aaPredicted RBP19.03■□□□□ 0.64
MEIS3-208ENST00000560253 LARGE2Q8N3Y3 721 aa19.03■□□□□ 0.64
MEIS3-208ENST00000560253 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
MEIS3-208ENST00000560253 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
MEIS3-208ENST00000560253 G2E3Q7L622 706 aa19.02■□□□□ 0.64
MEIS3-208ENST00000560253 IQCA1LA6NCM1 817 aa19.01■□□□□ 0.63
MEIS3-208ENST00000560253 DICER1Q9UPY3 1922 aaKnown RBP19.01■□□□□ 0.63
MEIS3-208ENST00000560253 CACNA1FO60840 1977 aa19.01■□□□□ 0.63
MEIS3-208ENST00000560253 ZNF521Q96K83 1311 aa19■□□□□ 0.63
MEIS3-208ENST00000560253 PPIP5K2O43314 1243 aa19■□□□□ 0.63
MEIS3-208ENST00000560253 RPS8P62241 208 aaKnown RBP19■□□□□ 0.63
MEIS3-208ENST00000560253 NIM1KQ8IY84 436 aa19■□□□□ 0.63
MEIS3-208ENST00000560253 LINS1Q8NG48 757 aa19■□□□□ 0.63
MEIS3-208ENST00000560253 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
MEIS3-208ENST00000560253 NEURL1BA8MQ27 555 aa18.99■□□□□ 0.63
MEIS3-208ENST00000560253 DDNO94850 711 aaPredicted RBP18.99■□□□□ 0.63
MEIS3-208ENST00000560253 IGKV5-2P06315 115 aa18.99■□□□□ 0.63
MEIS3-208ENST00000560253 SMC1BQ8NDV3 1235 aa18.99■□□□□ 0.63
MEIS3-208ENST00000560253 TIAM2Q8IVF5 1701 aa18.99■□□□□ 0.63
MEIS3-208ENST00000560253 CWF19L2Q2TBE0 894 aaKnown RBP18.98■□□□□ 0.63
MEIS3-208ENST00000560253 FZD9O00144 591 aa18.97■□□□□ 0.63
MEIS3-208ENST00000560253 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
MEIS3-208ENST00000560253 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
MEIS3-208ENST00000560253 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
MEIS3-208ENST00000560253 RTFDC1Q9BY42 306 aaPredicted RBP18.97■□□□□ 0.63
MEIS3-208ENST00000560253 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
MEIS3-208ENST00000560253 GCKRQ14397 625 aa18.96■□□□□ 0.63
MEIS3-208ENST00000560253 UBE3BQ7Z3V4 1068 aa18.96■□□□□ 0.63
MEIS3-208ENST00000560253 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
MEIS3-208ENST00000560253 GPC2Q8N158 579 aa18.96■□□□□ 0.63
MEIS3-208ENST00000560253 CELF1Q92879 486 aaKnown RBP18.96■□□□□ 0.63
MEIS3-208ENST00000560253 EYA3Q99504 573 aa18.96■□□□□ 0.63
MEIS3-208ENST00000560253 C6orf229H3BNL8 230 aa18.95■□□□□ 0.62
MEIS3-208ENST00000560253 H7C1W4 665 aa18.95■□□□□ 0.62
MEIS3-208ENST00000560253 CTSWP56202 376 aa18.95■□□□□ 0.62
MEIS3-208ENST00000560253 AOC3Q16853 763 aa18.95■□□□□ 0.62
MEIS3-208ENST00000560253 L3MBTL3Q96JM7 780 aaPredicted RBP18.95■□□□□ 0.62
MEIS3-208ENST00000560253 GJA3Q9Y6H8 435 aa18.95■□□□□ 0.62
MEIS3-208ENST00000560253 LAMB2P55268 1798 aa18.95■□□□□ 0.62
MEIS3-208ENST00000560253 G3V3G9 751 aa18.94■□□□□ 0.62
MEIS3-208ENST00000560253 LMOD1P29536 600 aaPredicted RBP18.94■□□□□ 0.62
MEIS3-208ENST00000560253 WASHC4Q2M389 1173 aa18.94■□□□□ 0.62
MEIS3-208ENST00000560253 DCAF8Q5TAQ9 597 aa18.94■□□□□ 0.62
MEIS3-208ENST00000560253 ANKIB1Q9P2G1 1089 aa18.94■□□□□ 0.62
MEIS3-208ENST00000560253 HACL1Q9UJ83 578 aa18.94■□□□□ 0.62
MEIS3-208ENST00000560253 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
MEIS3-208ENST00000560253 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
MEIS3-208ENST00000560253 CT47B1P0C2W7 299 aaPredicted RBP18.93■□□□□ 0.62
MEIS3-208ENST00000560253 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
MEIS3-208ENST00000560253 SLC4A10Q6U841 1118 aa18.93■□□□□ 0.62
MEIS3-208ENST00000560253 CCDC85AQ96PX6 553 aaPredicted RBP18.93■□□□□ 0.62
MEIS3-208ENST00000560253 SEC31BQ9NQW1 1179 aa18.93■□□□□ 0.62
MEIS3-208ENST00000560253 ZNRF3Q9ULT6 936 aa18.93■□□□□ 0.62
MEIS3-208ENST00000560253 F6X3S4 739 aa18.92■□□□□ 0.62
MEIS3-208ENST00000560253 TNIP1Q15025 636 aa18.92■□□□□ 0.62
MEIS3-208ENST00000560253 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
MEIS3-208ENST00000560253 TTLL11Q8NHH1 800 aa18.92■□□□□ 0.62
MEIS3-208ENST00000560253 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
MEIS3-208ENST00000560253 ZNF541Q9H0D2 1346 aa18.92■□□□□ 0.62
MEIS3-208ENST00000560253 POTECB2RU33 542 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 ALDH1L1O75891 902 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 IGHMBP2P38935 993 aaKnown RBP18.91■□□□□ 0.62
MEIS3-208ENST00000560253 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 BEND3Q5T5X7 828 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 MIER1Q8N108 512 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 PLA2G12BQ9BX93 195 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 ZC3H12CQ9C0D7 883 aaKnown RBP18.91■□□□□ 0.62
MEIS3-208ENST00000560253 SRCIN1Q9C0H9 1055 aa18.91■□□□□ 0.62
MEIS3-208ENST00000560253 TAF1DQ9H5J8 278 aaPredicted RBP18.9■□□□□ 0.62
MEIS3-208ENST00000560253 GGA1Q9UJY5 639 aa18.9■□□□□ 0.62
MEIS3-208ENST00000560253 CLEC11AQ9Y240 323 aa18.9■□□□□ 0.62
MEIS3-208ENST00000560253 PTPRCP08575 1304 aa18.9■□□□□ 0.62
MEIS3-208ENST00000560253 EPHX2P34913 555 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 GPSM2P81274 684 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 EAPPQ56P03 285 aaPredicted RBP18.89■□□□□ 0.61
MEIS3-208ENST00000560253 CIAPIN1Q6FI81 312 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 CHADLQ6NUI6 762 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 MRPL50Q8N5N7 158 aaKnown RBP18.89■□□□□ 0.61
MEIS3-208ENST00000560253 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 PODXL2Q9NZ53 605 aa18.89■□□□□ 0.61
MEIS3-208ENST00000560253 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms