RNA–Protein interactions for RNA: ENST00000560234.1

PCLAF-208, Transcript of PCNA clamp associated factor, human

TSL 2

Gene PCLAF, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCLAF-208	ENST00000560234	ATP10D	Q9P241	1426 aa		12.58	□□□□□ -0.4
PCLAF-208	ENST00000560234	TRMT112	Q9UI30	125 aa	Known RBP	12.58	□□□□□ -0.4
PCLAF-208	ENST00000560234	PI4KAP2	A4QPH2	592 aa		12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	FKBP5	Q13451	457 aa	Predicted RBP	12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	RTL5	Q5HYW3	569 aa	Predicted RBP	12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	NLRP10	Q86W26	655 aa		12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	PI4KAP1	Q8N8J0	262 aa		12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	MAP3K2	Q9Y2U5	619 aa		12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	SCN7A	Q01118	1682 aa		12.57	□□□□□ -0.4
PCLAF-208	ENST00000560234	FLII	Q13045	1269 aa		12.56	□□□□□ -0.4
PCLAF-208	ENST00000560234	KSR2	Q6VAB6	950 aa		12.56	□□□□□ -0.4
PCLAF-208	ENST00000560234	ARHGAP27	Q6ZUM4	889 aa		12.56	□□□□□ -0.4
PCLAF-208	ENST00000560234	NTSR2	O95665	410 aa		12.55	□□□□□ -0.4
PCLAF-208	ENST00000560234	HCLS1	P14317	486 aa	Predicted RBP	12.55	□□□□□ -0.4
PCLAF-208	ENST00000560234	NEXN	Q0ZGT2	675 aa		12.55	□□□□□ -0.4
PCLAF-208	ENST00000560234	TTLL6	Q8N841	843 aa		12.55	□□□□□ -0.4
PCLAF-208	ENST00000560234	PDZRN3	Q9UPQ7	1066 aa		12.55	□□□□□ -0.4
PCLAF-208	ENST00000560234	SYNE4	Q8N205	404 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	RPGR	Q92834	1020 aa	Known RBP	12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	FAM89A	Q96GI7	184 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	MASTL	Q96GX5	879 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	ISCA1	Q9BUE6	129 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	METTL22	Q9BUU2	404 aa	Predicted RBP	12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	BCL2L13	Q9BXK5	485 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	SH3TC1	Q8TE82	1336 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	ABCC12	Q96J65	1359 aa		12.54	□□□□□ -0.4
PCLAF-208	ENST00000560234	SRGN	P10124	158 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	NPR1	P16066	1061 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	YY1	P25490	414 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	STYK1	Q6J9G0	422 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	JARID2	Q92833	1246 aa	Predicted RBP	12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	CNKSR1	Q969H4	720 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	NLRP3	Q96P20	1036 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	BOLA1	Q9Y3E2	137 aa		12.53	□□□□□ -0.4
PCLAF-208	ENST00000560234	BCOR	Q6W2J9	1755 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234		F6X3S4	739 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	C21orf2	O43822	256 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	TRMT2A	Q8IZ69	625 aa	Known RBP	12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	EFCAB3	Q8N7B9	438 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	DNAAF4	Q8WXU2	420 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	SMC4	Q9NTJ3	1288 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	CWC25	Q9NXE8	425 aa	Predicted RBP	12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	ADCY9	O60503	1353 aa		12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.52	□□□□□ -0.41
PCLAF-208	ENST00000560234	TRIM28	Q13263	835 aa	Known RBP	12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	CWF19L2	Q2TBE0	894 aa	Known RBP	12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	PRPF40B	Q6NWY9	871 aa	Known RBP	12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	SLC4A10	Q6U841	1118 aa		12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	MRPL50	Q8N5N7	158 aa	Known RBP	12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	CCDC191	Q8NCU4	936 aa		12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	SSH1	Q8WYL5	1049 aa		12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	RNF25	Q96BH1	459 aa	Predicted RBP	12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	RBM17	Q96I25	401 aa	Known RBP	12.51	□□□□□ -0.41
PCLAF-208	ENST00000560234	KLRG2	A4D1S0	409 aa	Predicted RBP	12.5	□□□□□ -0.41
PCLAF-208	ENST00000560234	IRS4	O14654	1257 aa	Predicted RBP	12.5	□□□□□ -0.41
PCLAF-208	ENST00000560234	ALDH1B1	P30837	517 aa		12.5	□□□□□ -0.41
PCLAF-208	ENST00000560234	SLC10A5	Q5PT55	438 aa		12.5	□□□□□ -0.41
PCLAF-208	ENST00000560234	MARVELD3	Q96A59	401 aa		12.5	□□□□□ -0.41
PCLAF-208	ENST00000560234	RNF123	Q5XPI4	1314 aa		12.5	□□□□□ -0.41
PCLAF-208	ENST00000560234	IGKV5-2	P06315	115 aa		12.49	□□□□□ -0.41
PCLAF-208	ENST00000560234	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.49	□□□□□ -0.41
PCLAF-208	ENST00000560234	ZBED9	Q6R2W3	1325 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	NEURL1B	A8MQ27	555 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	RIOK3	O14730	519 aa	Known RBP	12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	PCCA	P05165	728 aa	Predicted RBP	12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	CT47B1	P0C2W7	299 aa	Predicted RBP	12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	HSP90B1	P14625	803 aa	Known RBP	12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	RASSF7	Q02833	373 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	ALDH1L2	Q3SY69	923 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	CRY2	Q49AN0	593 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	LINS1	Q8NG48	757 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	NRXN2	Q9P2S2	1712 aa		12.48	□□□□□ -0.41
PCLAF-208	ENST00000560234	AFDN	P55196	1824 aa	Known RBP	12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234	OLFM4	Q6UX06	510 aa		12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234	DDX46	Q7L014	1031 aa	Known RBP	12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234	UBE3B	Q7Z3V4	1068 aa		12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234	YTHDC1	Q96MU7	727 aa	Known RBP	12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234	TMX4	Q9H1E5	349 aa	Predicted RBP	12.47	□□□□□ -0.41
PCLAF-208	ENST00000560234		G3V3G9	751 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	PPEF1	O14829	653 aa	Predicted RBP	12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	HOXA10	P31260	410 aa	Predicted RBP	12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	RARS	P54136	660 aa	Known RBP	12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	GCKR	Q14397	625 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	BEND3	Q5T5X7	828 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	C9orf131	Q5VYM1	1079 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	CRAMP1	Q96RY5	1269 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	SRCIN1	Q9C0H9	1055 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	RNF181	Q9P0P0	153 aa		12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	NOB1	Q9ULX3	412 aa	Known RBP	12.46	□□□□□ -0.41
PCLAF-208	ENST00000560234	PTPRC	P08575	1304 aa		12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	PDE8A	O60658	829 aa		12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	CCDC93	Q567U6	631 aa		12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	SOGA3	Q5TF21	947 aa		12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	FRAT1	Q92837	279 aa	Predicted RBP	12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	NUP98	P52948	1817 aa		12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	KIF13B	Q9NQT8	1826 aa		12.45	□□□□□ -0.42
PCLAF-208	ENST00000560234	RIC1	Q4ADV7	1423 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms