RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 MYD88Q99836 296 aa29.89■■■□□ 2.38
CRNDE-209ENST00000560208 HACL1Q9UJ83 578 aa29.89■■■□□ 2.38
CRNDE-209ENST00000560208 IRS4O14654 1257 aaPredicted RBP29.88■■■□□ 2.37
CRNDE-209ENST00000560208 PPIP5K2O43314 1243 aa29.88■■■□□ 2.37
CRNDE-209ENST00000560208 MPNDQ8N594 471 aa29.88■■■□□ 2.37
CRNDE-209ENST00000560208 SUPT20HQ8NEM7 779 aa29.88■■■□□ 2.37
CRNDE-209ENST00000560208 VPS33BQ9H267 617 aa29.88■■■□□ 2.37
CRNDE-209ENST00000560208 DPP8Q6V1X1 898 aaPredicted RBP29.87■■■□□ 2.37
CRNDE-209ENST00000560208 NIM1KQ8IY84 436 aa29.87■■■□□ 2.37
CRNDE-209ENST00000560208 KLRG1Q96E93 195 aa29.87■■■□□ 2.37
CRNDE-209ENST00000560208 RTFDC1Q9BY42 306 aaPredicted RBP29.87■■■□□ 2.37
CRNDE-209ENST00000560208 GJA3Q9Y6H8 435 aa29.87■■■□□ 2.37
CRNDE-209ENST00000560208 AOC3Q16853 763 aa29.86■■■□□ 2.37
CRNDE-209ENST00000560208 TWISTNBQ3B726 338 aaPredicted RBP29.86■■■□□ 2.37
CRNDE-209ENST00000560208 TMC4Q7Z404 712 aa29.86■■■□□ 2.37
CRNDE-209ENST00000560208 LDHDQ86WU2 507 aa29.86■■■□□ 2.37
CRNDE-209ENST00000560208 ZBTB38Q8NAP3 1195 aaPredicted RBP29.86■■■□□ 2.37
CRNDE-209ENST00000560208 STK31Q9BXU1 1019 aa29.86■■■□□ 2.37
CRNDE-209ENST00000560208 EPHX2P34913 555 aa29.85■■■□□ 2.37
CRNDE-209ENST00000560208 CCDC191Q8NCU4 936 aa29.85■■■□□ 2.37
CRNDE-209ENST00000560208 METTL22Q9BUU2 404 aaPredicted RBP29.85■■■□□ 2.37
CRNDE-209ENST00000560208 EAPPQ56P03 285 aaPredicted RBP29.84■■■□□ 2.37
CRNDE-209ENST00000560208 WDR63Q8IWG1 891 aa29.83■■■□□ 2.37
CRNDE-209ENST00000560208 CELF1Q92879 486 aaKnown RBP29.83■■■□□ 2.37
CRNDE-209ENST00000560208 CWC25Q9NXE8 425 aaPredicted RBP29.83■■■□□ 2.37
CRNDE-209ENST00000560208 MAP3K2Q9Y2U5 619 aa29.83■■■□□ 2.37
CRNDE-209ENST00000560208 HSP90B1P14625 803 aaKnown RBP29.82■■■□□ 2.36
CRNDE-209ENST00000560208 LRRC37AA6NMS7 1700 aa29.82■■■□□ 2.36
CRNDE-209ENST00000560208 PCCAP05165 728 aaPredicted RBP29.81■■■□□ 2.36
CRNDE-209ENST00000560208 KSR2Q6VAB6 950 aa29.81■■■□□ 2.36
CRNDE-209ENST00000560208 PNMA8AQ86V59 439 aaPredicted RBP29.81■■■□□ 2.36
CRNDE-209ENST00000560208 PI4KAP2A4QPH2 592 aa29.8■■■□□ 2.36
CRNDE-209ENST00000560208 PI4KAP1Q8N8J0 262 aa29.8■■■□□ 2.36
CRNDE-209ENST00000560208 ZNRF3Q9ULT6 936 aa29.8■■■□□ 2.36
CRNDE-209ENST00000560208 CLEC11AQ9Y240 323 aa29.8■■■□□ 2.36
CRNDE-209ENST00000560208 FANCIQ9NVI1 1328 aa29.79■■■□□ 2.36
CRNDE-209ENST00000560208 JARID2Q92833 1246 aaPredicted RBP29.79■■■□□ 2.36
CRNDE-209ENST00000560208 CACNA1FO60840 1977 aa29.79■■■□□ 2.36
CRNDE-209ENST00000560208 ADAMTSL1Q8N6G6 1762 aa29.78■■■□□ 2.36
CRNDE-209ENST00000560208 SLC4A2P04920 1241 aa29.78■■■□□ 2.36
CRNDE-209ENST00000560208 LMOD1P29536 600 aaPredicted RBP29.78■■■□□ 2.36
CRNDE-209ENST00000560208 KIAA2012Q0VF49 1180 aa29.78■■■□□ 2.36
CRNDE-209ENST00000560208 LTBP1Q14766 1721 aa29.77■■■□□ 2.36
CRNDE-209ENST00000560208 COL4A1P02462 1669 aa29.77■■■□□ 2.36
CRNDE-209ENST00000560208 RPS8P62241 208 aaKnown RBP29.77■■■□□ 2.36
CRNDE-209ENST00000560208 G2E3Q7L622 706 aa29.77■■■□□ 2.36
CRNDE-209ENST00000560208 JMYQ8N9B5 988 aa29.77■■■□□ 2.36
CRNDE-209ENST00000560208 PDE8AO60658 829 aa29.76■■■□□ 2.35
CRNDE-209ENST00000560208 SCNN1DP51172 638 aa29.76■■■□□ 2.35
CRNDE-209ENST00000560208 CXCL9Q07325 125 aa29.76■■■□□ 2.35
CRNDE-209ENST00000560208 NSFL1CQ9UNZ2 370 aaKnown RBP29.76■■■□□ 2.35
CRNDE-209ENST00000560208 DUOX1Q9NRD9 1551 aa29.76■■■□□ 2.35
CRNDE-209ENST00000560208 PCNTO95613 3336 aa29.76■■■□□ 2.35
CRNDE-209ENST00000560208 IGKV5-2P06315 115 aa29.75■■■□□ 2.35
CRNDE-209ENST00000560208 EPS15P42566 896 aa29.75■■■□□ 2.35
CRNDE-209ENST00000560208 NEXNQ0ZGT2 675 aa29.75■■■□□ 2.35
CRNDE-209ENST00000560208 SEC31BQ9NQW1 1179 aa29.75■■■□□ 2.35
CRNDE-209ENST00000560208 PASKQ96RG2 1323 aa29.74■■■□□ 2.35
CRNDE-209ENST00000560208 CCDC152Q4G0S7 254 aa29.74■■■□□ 2.35
CRNDE-209ENST00000560208 ITGBL1O95965 494 aaPredicted RBP29.73■■■□□ 2.35
CRNDE-209ENST00000560208 CREBZFQ9NS37 354 aa29.73■■■□□ 2.35
CRNDE-209ENST00000560208 VAMP4O75379 141 aa29.72■■■□□ 2.35
CRNDE-209ENST00000560208 GPSM2P81274 684 aa29.72■■■□□ 2.35
CRNDE-209ENST00000560208 EXOSC9Q06265 439 aaKnown RBP29.72■■■□□ 2.35
CRNDE-209ENST00000560208 CDHR2Q9BYE9 1310 aa29.71■■■□□ 2.35
CRNDE-209ENST00000560208 C6orf229H3BNL8 230 aa29.71■■■□□ 2.35
CRNDE-209ENST00000560208 WASHC4Q2M389 1173 aa29.71■■■□□ 2.35
CRNDE-209ENST00000560208 MAP1SQ66K74 1059 aaPredicted RBP29.71■■■□□ 2.35
CRNDE-209ENST00000560208 CIAPIN1Q6FI81 312 aa29.71■■■□□ 2.35
CRNDE-209ENST00000560208 CNTROBQ8N137 903 aa29.71■■■□□ 2.35
CRNDE-209ENST00000560208 SPINK5Q9NQ38 1064 aaPredicted RBP29.71■■■□□ 2.35
CRNDE-209ENST00000560208 RAD17O75943 681 aa29.7■■■□□ 2.35
CRNDE-209ENST00000560208 FLIIQ13045 1269 aa29.7■■■□□ 2.35
CRNDE-209ENST00000560208 CWF19L2Q2TBE0 894 aaKnown RBP29.7■■■□□ 2.35
CRNDE-209ENST00000560208 CCDC85AQ96PX6 553 aaPredicted RBP29.7■■■□□ 2.35
CRNDE-209ENST00000560208 GPRC5DQ9NZD1 345 aa29.7■■■□□ 2.35
CRNDE-209ENST00000560208 POLLQ9UGP5 575 aa29.7■■■□□ 2.35
CRNDE-209ENST00000560208 MYH3P11055 1940 aa29.7■■■□□ 2.34
CRNDE-209ENST00000560208 NEURL1BA8MQ27 555 aa29.69■■■□□ 2.34
CRNDE-209ENST00000560208 TNIP1Q15025 636 aa29.69■■■□□ 2.34
CRNDE-209ENST00000560208 YDJCA8MPS7 323 aa29.68■■■□□ 2.34
CRNDE-209ENST00000560208 GMPSP49915 693 aaPredicted RBP29.68■■■□□ 2.34
CRNDE-209ENST00000560208 USP50Q70EL3 339 aaPredicted RBP29.68■■■□□ 2.34
CRNDE-209ENST00000560208 ZNF521Q96K83 1311 aa29.68■■■□□ 2.34
CRNDE-209ENST00000560208 RIMBP2O15034 1052 aa29.67■■■□□ 2.34
CRNDE-209ENST00000560208 FKBP5Q13451 457 aaPredicted RBP29.67■■■□□ 2.34
CRNDE-209ENST00000560208 CTSWP56202 376 aa29.66■■■□□ 2.34
CRNDE-209ENST00000560208 TBC1D16Q8TBP0 767 aa29.66■■■□□ 2.34
CRNDE-209ENST00000560208 EYA3Q99504 573 aa29.66■■■□□ 2.34
CRNDE-209ENST00000560208 BCL2L13Q9BXK5 485 aa29.66■■■□□ 2.34
CRNDE-209ENST00000560208 MYH16Q9H6N6 1097 aa29.66■■■□□ 2.34
CRNDE-209ENST00000560208 ADARB2Q9NS39 739 aaKnown RBP29.66■■■□□ 2.34
CRNDE-209ENST00000560208 TMEM88BA6NKF7 163 aa29.65■■■□□ 2.34
CRNDE-209ENST00000560208 DNAAF4Q8WXU2 420 aa29.65■■■□□ 2.34
CRNDE-209ENST00000560208 PODXL2Q9NZ53 605 aa29.65■■■□□ 2.34
CRNDE-209ENST00000560208 ANKRD18AQ8IVF6 992 aa29.64■■■□□ 2.34
CRNDE-209ENST00000560208 GPR101Q96P66 508 aaPredicted RBP29.64■■■□□ 2.34
CRNDE-209ENST00000560208 DBNDD1Q9H9R9 158 aa29.64■■■□□ 2.34
CRNDE-209ENST00000560208 ANKIB1Q9P2G1 1089 aa29.64■■■□□ 2.34
CRNDE-209ENST00000560208 MKRN1Q9UHC7 482 aaKnown RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms