RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CHRNA5P30532 468 aa15.15■□□□□ 0.02
RABGGTA-215ENST00000560207 CASP7P55210 303 aa15.15■□□□□ 0.02
RABGGTA-215ENST00000560207 GPR162Q16538 588 aa15.15■□□□□ 0.02
RABGGTA-215ENST00000560207 UBTFL1P0CB47 393 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-215ENST00000560207 CTSWP56202 376 aa15.14■□□□□ 0.01
RABGGTA-215ENST00000560207 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
RABGGTA-215ENST00000560207 CDC5LQ99459 802 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-215ENST00000560207 USP44Q9H0E7 712 aa15.14■□□□□ 0.01
RABGGTA-215ENST00000560207 SLX4Q8IY92 1834 aa15.14■□□□□ 0.01
RABGGTA-215ENST00000560207 CSF1RP07333 972 aa15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 GRAPQ13588 217 aa15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 RTL5Q5HYW3 569 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 TTLL11Q8NHH1 800 aa15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 GRAPLQ8TC17 118 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 DDX19BQ9UMR2 479 aa15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 BCS1LQ9Y276 419 aa15.13■□□□□ 0.01
RABGGTA-215ENST00000560207 FER1L6Q2WGJ9 1857 aa15.12■□□□□ 0.01
RABGGTA-215ENST00000560207 PRPF40BQ6NWY9 871 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-215ENST00000560207 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
RABGGTA-215ENST00000560207 SYNE4Q8N205 404 aa15.12■□□□□ 0.01
RABGGTA-215ENST00000560207 NBPF7P0C2Y1 421 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-215ENST00000560207 RPS8P62241 208 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-215ENST00000560207 SP8Q8IXZ3 490 aa15.11■□□□□ 0.01
RABGGTA-215ENST00000560207 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
RABGGTA-215ENST00000560207 LRRC37AA6NMS7 1700 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 ANKRD18BA2A2Z9 1011 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 IFIT5Q13325 482 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 RABL6Q3YEC7 729 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 CCDC93Q567U6 631 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
RABGGTA-215ENST00000560207 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 GNAI2P04899 355 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 IGHMBP2P38935 993 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 FOXO4P98177 505 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 AAMPQ13685 434 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 VPS33BQ9H267 617 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 ATP6V0A2Q9Y487 856 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 TAF1P21675 1872 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 LTBP3Q9NS15 1303 aa15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 DICER1Q9UPY3 1922 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-215ENST00000560207 SBF1O95248 1867 aa15.08■□□□□ 0.01
RABGGTA-215ENST00000560207 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
RABGGTA-215ENST00000560207 MVPQ14764 893 aaKnown RBP15.08■□□□□ 0
RABGGTA-215ENST00000560207 LMBR1LQ6UX01 489 aa15.08■□□□□ 0
RABGGTA-215ENST00000560207 SUPT20HQ8NEM7 779 aa15.08■□□□□ 0
RABGGTA-215ENST00000560207 FBXO3Q9UK99 471 aa15.08■□□□□ 0
RABGGTA-215ENST00000560207 ITGA6P23229 1130 aa15.07■□□□□ 0
RABGGTA-215ENST00000560207 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
RABGGTA-215ENST00000560207 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
RABGGTA-215ENST00000560207 C7orf43Q8WVR3 580 aa15.07■□□□□ 0
RABGGTA-215ENST00000560207 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
RABGGTA-215ENST00000560207 SUCLG2Q96I99 432 aa15.07■□□□□ 0
RABGGTA-215ENST00000560207 MPHOSPH8Q99549 860 aa15.07■□□□□ 0
RABGGTA-215ENST00000560207 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
RABGGTA-215ENST00000560207 SPEF2Q9C093 1822 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
RABGGTA-215ENST00000560207 C21orf2O43822 256 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 0
RABGGTA-215ENST00000560207 MTX1Q13505 466 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 TAF7LQ5H9L4 462 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 PSMD1Q99460 953 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 MEIS3Q99687 375 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 ANKRD2Q9GZV1 360 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 BICC1Q9H694 974 aaKnown RBP15.06■□□□□ 0
RABGGTA-215ENST00000560207 GREM2Q9H772 168 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
RABGGTA-215ENST00000560207 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
RABGGTA-215ENST00000560207 KAZALD1Q96I82 304 aa15.05■□□□□ -0
RABGGTA-215ENST00000560207 ZC3H4Q9UPT8 1303 aaKnown RBP15.05■□□□□ -0
RABGGTA-215ENST00000560207 RLBP1P12271 317 aa15.04■□□□□ -0
RABGGTA-215ENST00000560207 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
RABGGTA-215ENST00000560207 FAM161AQ3B820 660 aa15.04■□□□□ -0
RABGGTA-215ENST00000560207 PANK1Q8TE04 598 aa15.04■□□□□ -0
RABGGTA-215ENST00000560207 CELF1Q92879 486 aaKnown RBP15.04■□□□□ -0
RABGGTA-215ENST00000560207 TAOK3Q9H2K8 898 aa15.04■□□□□ -0
RABGGTA-215ENST00000560207 PODXL2Q9NZ53 605 aa15.04■□□□□ -0
RABGGTA-215ENST00000560207 LRRFIP2Q9Y608 721 aaKnown RBP15.04■□□□□ -0
RABGGTA-215ENST00000560207 CENPBP07199 599 aaPredicted RBP15.03■□□□□ -0
RABGGTA-215ENST00000560207 LMNB1P20700 586 aa15.03■□□□□ -0
RABGGTA-215ENST00000560207 RPAP2Q8IXW5 612 aaPredicted RBP15.03■□□□□ -0
RABGGTA-215ENST00000560207 MPNDQ8N594 471 aa15.03■□□□□ -0
RABGGTA-215ENST00000560207 ANKRD44Q8N8A2 993 aa15.03■□□□□ -0
RABGGTA-215ENST00000560207 RTFDC1Q9BY42 306 aaPredicted RBP15.03■□□□□ -0
RABGGTA-215ENST00000560207 SEC31BQ9NQW1 1179 aa15.03■□□□□ -0
RABGGTA-215ENST00000560207 XDHP47989 1333 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 PLIN1O60240 522 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 EPHA10Q5JZY3 1008 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 DPP8Q6V1X1 898 aaPredicted RBP15.02■□□□□ -0
RABGGTA-215ENST00000560207 LDHAL6AQ6ZMR3 332 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 EYA3Q99504 573 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 TNNQ9UQP3 1299 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 COG6Q9Y2V7 657 aa15.02■□□□□ -0
RABGGTA-215ENST00000560207 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
RABGGTA-215ENST00000560207 HMMRO75330 724 aa15.01□□□□□ -0.01
RABGGTA-215ENST00000560207 CCDC85AQ96PX6 553 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms