RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 RPS8P62241 208 aaKnown RBP10.82□□□□□ -0.68
USP3-217ENST00000560070 SOGA3Q5TF21 947 aa10.82□□□□□ -0.68
USP3-217ENST00000560070 RTKN2Q8IZC4 609 aa10.82□□□□□ -0.68
USP3-217ENST00000560070 TTLL11Q8NHH1 800 aa10.82□□□□□ -0.68
USP3-217ENST00000560070 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
USP3-217ENST00000560070 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 GRM8O00222 908 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
USP3-217ENST00000560070 NBPF7P0C2Y1 421 aaPredicted RBP10.81□□□□□ -0.68
USP3-217ENST00000560070 LMNB1P20700 586 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 CASP7P55210 303 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 FKBP4Q02790 459 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP3-217ENST00000560070 EPHA10Q5JZY3 1008 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 LMBR1LQ6UX01 489 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 SP8Q8IXZ3 490 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 MPNDQ8N594 471 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 ZNF784Q8NCA9 323 aaPredicted RBP10.81□□□□□ -0.68
USP3-217ENST00000560070 SUCLG2Q96I99 432 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 TAOK3Q9H2K8 898 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 GREM2Q9H772 168 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 ATP6V0A2Q9Y487 856 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 SCN7AQ01118 1682 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 CDHR2Q9BYE9 1310 aa10.81□□□□□ -0.68
USP3-217ENST00000560070 FOXO4P98177 505 aa10.8□□□□□ -0.68
USP3-217ENST00000560070 DPP8Q6V1X1 898 aaPredicted RBP10.8□□□□□ -0.68
USP3-217ENST00000560070 ANKRD18AQ8IVF6 992 aa10.8□□□□□ -0.68
USP3-217ENST00000560070 NSFL1CQ9UNZ2 370 aaKnown RBP10.8□□□□□ -0.68
USP3-217ENST00000560070 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
USP3-217ENST00000560070 RIMBP2O15034 1052 aa10.79□□□□□ -0.68
USP3-217ENST00000560070 ITGA6P23229 1130 aa10.79□□□□□ -0.68
USP3-217ENST00000560070 GPSM2P81274 684 aa10.79□□□□□ -0.68
USP3-217ENST00000560070 CC2D2BQ6DHV5 1058 aa10.79□□□□□ -0.68
USP3-217ENST00000560070 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
USP3-217ENST00000560070 GPR101Q96P66 508 aaPredicted RBP10.79□□□□□ -0.68
USP3-217ENST00000560070 USP44Q9H0E7 712 aa10.79□□□□□ -0.68
USP3-217ENST00000560070 WTIPA6NIX2 430 aaPredicted RBP10.78□□□□□ -0.68
USP3-217ENST00000560070 PLIN1O60240 522 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 CSF1RP07333 972 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 CCT4P50991 539 aaKnown RBP10.78□□□□□ -0.68
USP3-217ENST00000560070 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
USP3-217ENST00000560070 AOC3Q16853 763 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 FAM161AQ3B820 660 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 ZKSCAN2Q63HK3 967 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 ATF7IPQ6VMQ6 1270 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 LARGE2Q8N3Y3 721 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 ZNF594Q96JF6 807 aaPredicted RBP10.78□□□□□ -0.68
USP3-217ENST00000560070 CDC5LQ99459 802 aaKnown RBP10.78□□□□□ -0.68
USP3-217ENST00000560070 ANKIB1Q9P2G1 1089 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 KIF16BQ96L93 1317 aa10.78□□□□□ -0.68
USP3-217ENST00000560070 N4BP2Q86UW6 1770 aaPredicted RBP10.77□□□□□ -0.68
USP3-217ENST00000560070 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.68
USP3-217ENST00000560070 ANKRD18BA2A2Z9 1011 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 PPIP5K2O43314 1243 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 TRIM27P14373 513 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 IGHMBP2P38935 993 aaKnown RBP10.77□□□□□ -0.69
USP3-217ENST00000560070 IARSP41252 1262 aaKnown RBP10.77□□□□□ -0.69
USP3-217ENST00000560070 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.69
USP3-217ENST00000560070 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 TAF7LQ5H9L4 462 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
USP3-217ENST00000560070 ARHGAP45Q92619 1136 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 KAZALD1Q96I82 304 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 PLA2G12BQ9BX93 195 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 BICC1Q9H694 974 aaKnown RBP10.77□□□□□ -0.69
USP3-217ENST00000560070 RRAGCQ9HB90 399 aa10.77□□□□□ -0.69
USP3-217ENST00000560070 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
USP3-217ENST00000560070 NRXN2Q9P2S2 1712 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 BCORQ6W2J9 1755 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 DDNO94850 711 aaPredicted RBP10.76□□□□□ -0.69
USP3-217ENST00000560070 UBTFL1P0CB47 393 aaPredicted RBP10.76□□□□□ -0.69
USP3-217ENST00000560070 DOK7Q18PE1 504 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 TMEM57Q8N5G2 664 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 JDP2Q8WYK2 163 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 PSMD1Q99460 953 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 MPHOSPH8Q99549 860 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 POLLQ9UGP5 575 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 MINPP1Q9UNW1 487 aa10.76□□□□□ -0.69
USP3-217ENST00000560070 G3V3G9 751 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 ABCB7O75027 752 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 WASHC4Q2M389 1173 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 TMC4Q7Z404 712 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 FTSJ3Q8IY81 847 aaKnown RBP10.75□□□□□ -0.69
USP3-217ENST00000560070 DZIP1LQ8IYY4 767 aaKnown RBP10.75□□□□□ -0.69
USP3-217ENST00000560070 SUPT20HQ8NEM7 779 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 MEIS3Q99687 375 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 NMRK2Q9NPI5 230 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
USP3-217ENST00000560070 GJA3Q9Y6H8 435 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 LTBP3Q9NS15 1303 aa10.75□□□□□ -0.69
USP3-217ENST00000560070 AFDNP55196 1824 aaKnown RBP10.74□□□□□ -0.69
USP3-217ENST00000560070 SNAP23O00161 211 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 TAF5LO75529 589 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 UFL1O94874 794 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 RLBP1P12271 317 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 INTS3Q68E01 1043 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms