RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 KLHDC4Q8TBB5 520 aa15.09■□□□□ 0.01
HERC1-205ENST00000559886 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
HERC1-205ENST00000559886 PDE4AP27815 886 aa15.09■□□□□ 0.01
HERC1-205ENST00000559886 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
HERC1-205ENST00000559886 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
HERC1-205ENST00000559886 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.01
HERC1-205ENST00000559886 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
HERC1-205ENST00000559886 ABCC12Q96J65 1359 aa15.09■□□□□ 0.01
HERC1-205ENST00000559886 RGS3P49796 1198 aa15.08■□□□□ 0.01
HERC1-205ENST00000559886 CCDC57Q2TAC2 916 aa15.08■□□□□ 0.01
HERC1-205ENST00000559886 SMARCA5O60264 1052 aaPredicted RBP15.08■□□□□ 0
HERC1-205ENST00000559886 G3BP1Q13283 466 aaKnown RBP eCLIP15.08■□□□□ 0
HERC1-205ENST00000559886 IFIT5Q13325 482 aaKnown RBP15.08■□□□□ 0
HERC1-205ENST00000559886 ERC1Q8IUD2 1116 aa15.08■□□□□ 0
HERC1-205ENST00000559886 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
HERC1-205ENST00000559886 KIF1BPQ96EK5 621 aa15.08■□□□□ 0
HERC1-205ENST00000559886 GREM2Q9H772 168 aa15.08■□□□□ 0
HERC1-205ENST00000559886 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
HERC1-205ENST00000559886 RHPN1Q8TCX5 695 aa15.07■□□□□ 0
HERC1-205ENST00000559886 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
HERC1-205ENST00000559886 RTL9Q8NET4 1388 aa15.07■□□□□ 0
HERC1-205ENST00000559886 SERPINB2P05120 415 aa15.07■□□□□ 0
HERC1-205ENST00000559886 ITGA6P23229 1130 aa15.07■□□□□ 0
HERC1-205ENST00000559886 DDR1Q08345 913 aa15.07■□□□□ 0
HERC1-205ENST00000559886 CNBD1Q8NA66 436 aa15.07■□□□□ 0
HERC1-205ENST00000559886 SIL1Q9H173 461 aa15.07■□□□□ 0
HERC1-205ENST00000559886 NRXN2Q9P2S2 1712 aa15.07■□□□□ 0
HERC1-205ENST00000559886 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
HERC1-205ENST00000559886 SF3B3Q15393 1217 aaKnown RBP15.06■□□□□ 0
HERC1-205ENST00000559886 CCDC152Q4G0S7 254 aa15.06■□□□□ 0
HERC1-205ENST00000559886 RIC1Q4ADV7 1423 aa15.06■□□□□ 0
HERC1-205ENST00000559886 SASH1O94885 1247 aa15.06■□□□□ 0
HERC1-205ENST00000559886 ZNF594Q96JF6 807 aaPredicted RBP15.06■□□□□ 0
HERC1-205ENST00000559886 ANKRD18BA2A2Z9 1011 aa15.05■□□□□ 0
HERC1-205ENST00000559886 PRR5LQ6MZQ0 368 aa15.05■□□□□ 0
HERC1-205ENST00000559886 FBXO3Q9UK99 471 aa15.05■□□□□ 0
HERC1-205ENST00000559886 TNRC6CQ9HCJ0 1690 aaKnown RBP15.05■□□□□ -0
HERC1-205ENST00000559886 NPHP1O15259 732 aa15.05■□□□□ -0
HERC1-205ENST00000559886 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
HERC1-205ENST00000559886 C16orf71Q8IYS4 520 aaPredicted RBP15.05■□□□□ -0
HERC1-205ENST00000559886 NLRP3Q96P20 1036 aa15.05■□□□□ -0
HERC1-205ENST00000559886 EYA2O00167 538 aa15.04■□□□□ -0
HERC1-205ENST00000559886 CIAO1O76071 339 aa15.04■□□□□ -0
HERC1-205ENST00000559886 ATG9AQ7Z3C6 839 aa15.04■□□□□ -0
HERC1-205ENST00000559886 IL1RAPL2Q9NP60 686 aa15.04■□□□□ -0
HERC1-205ENST00000559886 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
HERC1-205ENST00000559886 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
HERC1-205ENST00000559886 LRP5O75197 1615 aa15.04■□□□□ -0
HERC1-205ENST00000559886 TAF1P21675 1872 aa15.04■□□□□ -0
HERC1-205ENST00000559886 SPEF2Q9C093 1822 aa15.03■□□□□ -0
HERC1-205ENST00000559886 IL15P40933 162 aaPredicted RBP15.03■□□□□ -0
HERC1-205ENST00000559886 MMP10P09238 476 aa15.03■□□□□ -0
HERC1-205ENST00000559886 ST5P78524 1137 aa15.03■□□□□ -0
HERC1-205ENST00000559886 LRRC24Q50LG9 513 aa15.03■□□□□ -0
HERC1-205ENST00000559886 PLEKHM2Q8IWE5 1019 aa15.03■□□□□ -0
HERC1-205ENST00000559886 OTUD7AQ8TE49 926 aaPredicted RBP15.03■□□□□ -0
HERC1-205ENST00000559886 MSL1Q68DK7 614 aa15.02■□□□□ -0
HERC1-205ENST00000559886 CLASRPQ8N2M8 674 aaKnown RBP15.02■□□□□ -0
HERC1-205ENST00000559886 PUS3Q9BZE2 481 aaKnown RBP15.02■□□□□ -0
HERC1-205ENST00000559886 BCL11AQ9H165 835 aa15.02■□□□□ -0
HERC1-205ENST00000559886 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
HERC1-205ENST00000559886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.02■□□□□ -0
HERC1-205ENST00000559886 SALL3Q9BXA9 1300 aa15.02■□□□□ -0
HERC1-205ENST00000559886 ANKRD31Q8N7Z5 1873 aa15.02□□□□□ -0.01
HERC1-205ENST00000559886 LDHAL6AQ6ZMR3 332 aa15.02□□□□□ -0.01
HERC1-205ENST00000559886 PDGFDQ9GZP0 370 aaPredicted RBP15.02□□□□□ -0.01
HERC1-205ENST00000559886 RIPOR2Q9Y4F9 1068 aa15.01□□□□□ -0.01
HERC1-205ENST00000559886 PARP3Q9Y6F1 533 aa15.01□□□□□ -0.01
HERC1-205ENST00000559886 TFCP2Q12800 502 aa15.01□□□□□ -0.01
HERC1-205ENST00000559886 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
HERC1-205ENST00000559886 COL4A1P02462 1669 aa15□□□□□ -0.01
HERC1-205ENST00000559886 CDC5LQ99459 802 aaKnown RBP15□□□□□ -0.01
HERC1-205ENST00000559886 OSBPL3Q9H4L5 887 aa15□□□□□ -0.01
HERC1-205ENST00000559886 PDE1AP54750 535 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 CRY2Q49AN0 593 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 EAF2Q96CJ1 260 aaPredicted RBP14.99□□□□□ -0.01
HERC1-205ENST00000559886 GPR108Q9NPR9 543 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 CNNM1Q9NRU3 951 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 STAP2Q9UGK3 403 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 KLRG2A4D1S0 409 aaPredicted RBP14.99□□□□□ -0.01
HERC1-205ENST00000559886 MX1P20591 662 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 IGHMBP2P38935 993 aaKnown RBP14.99□□□□□ -0.01
HERC1-205ENST00000559886 CEP126Q9P2H0 1117 aa14.99□□□□□ -0.01
HERC1-205ENST00000559886 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
HERC1-205ENST00000559886 AACSQ86V21 672 aa14.98□□□□□ -0.01
HERC1-205ENST00000559886 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
HERC1-205ENST00000559886 BRIP1Q9BX63 1249 aa14.98□□□□□ -0.01
HERC1-205ENST00000559886 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
HERC1-205ENST00000559886 IFIT2P09913 472 aaKnown RBP14.98□□□□□ -0.01
HERC1-205ENST00000559886 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
HERC1-205ENST00000559886 A0A1B0GUL6 1792 aa14.97□□□□□ -0.01
HERC1-205ENST00000559886 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
HERC1-205ENST00000559886 AOX1Q06278 1338 aa14.97□□□□□ -0.01
HERC1-205ENST00000559886 MROH5Q6ZUA9 1318 aa14.97□□□□□ -0.01
HERC1-205ENST00000559886 METTL24Q5JXM2 366 aa14.97□□□□□ -0.01
HERC1-205ENST00000559886 VGLL2Q8N8G2 317 aa14.97□□□□□ -0.01
HERC1-205ENST00000559886 CELF1Q92879 486 aaKnown RBP14.97□□□□□ -0.01
HERC1-205ENST00000559886 BSDC1Q9NW68 430 aaPredicted RBP14.97□□□□□ -0.01
HERC1-205ENST00000559886 RPS8P62241 208 aaKnown RBP14.96□□□□□ -0.01
HERC1-205ENST00000559886 BMP2KLQ5H9B9 411 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms