RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 POLA2Q14181 598 aa12.98□□□□□ -0.33
TPM1-221ENST00000559831 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
TPM1-221ENST00000559831 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
TPM1-221ENST00000559831 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
TPM1-221ENST00000559831 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
TPM1-221ENST00000559831 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
TPM1-221ENST00000559831 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
TPM1-221ENST00000559831 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
TPM1-221ENST00000559831 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
TPM1-221ENST00000559831 APBB1O00213 710 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 CSF1RP07333 972 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 CCDC152Q4G0S7 254 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 NLRP3Q96P20 1036 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 GREM2Q9H772 168 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
TPM1-221ENST00000559831 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.33
TPM1-221ENST00000559831 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 ANKRD18BA2A2Z9 1011 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
TPM1-221ENST00000559831 ITGA6P23229 1130 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
TPM1-221ENST00000559831 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
TPM1-221ENST00000559831 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
TPM1-221ENST00000559831 SIL1Q9H173 461 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
TPM1-221ENST00000559831 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
TPM1-221ENST00000559831 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
TPM1-221ENST00000559831 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
TPM1-221ENST00000559831 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
TPM1-221ENST00000559831 POLD1P28340 1107 aa12.93□□□□□ -0.34
TPM1-221ENST00000559831 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
TPM1-221ENST00000559831 G3BP1Q13283 466 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM1-221ENST00000559831 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
TPM1-221ENST00000559831 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
TPM1-221ENST00000559831 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
TPM1-221ENST00000559831 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
TPM1-221ENST00000559831 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
TPM1-221ENST00000559831 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
TPM1-221ENST00000559831 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
TPM1-221ENST00000559831 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
TPM1-221ENST00000559831 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
TPM1-221ENST00000559831 COL4A1P02462 1669 aa12.92□□□□□ -0.34
TPM1-221ENST00000559831 RTL9Q8NET4 1388 aa12.92□□□□□ -0.34
TPM1-221ENST00000559831 LRP5O75197 1615 aa12.91□□□□□ -0.34
TPM1-221ENST00000559831 RAB11FIP3O75154 756 aa12.91□□□□□ -0.34
TPM1-221ENST00000559831 DDX46Q7L014 1031 aaKnown RBP12.91□□□□□ -0.34
TPM1-221ENST00000559831 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
TPM1-221ENST00000559831 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
TPM1-221ENST00000559831 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
TPM1-221ENST00000559831 NOP58Q9Y2X3 529 aaKnown RBP12.91□□□□□ -0.34
TPM1-221ENST00000559831 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 A0A1B0GUL6 1792 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 EYA2O00167 538 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 PDE6BP35913 854 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
TPM1-221ENST00000559831 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
TPM1-221ENST00000559831 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 LNPKQ9C0E8 428 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
TPM1-221ENST00000559831 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 NUCB1Q02818 461 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 RHPN1Q8TCX5 695 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
TPM1-221ENST00000559831 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 IL1RAPL2Q9NP60 686 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
TPM1-221ENST00000559831 CIAO1O76071 339 aa12.88□□□□□ -0.35
TPM1-221ENST00000559831 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
TPM1-221ENST00000559831 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
TPM1-221ENST00000559831 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
TPM1-221ENST00000559831 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
TPM1-221ENST00000559831 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
TPM1-221ENST00000559831 H0YIN7 160 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 SASH1O94885 1247 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 NPR1P16066 1061 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 RGS3P49796 1198 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 RPS8P62241 208 aaKnown RBP12.87□□□□□ -0.35
TPM1-221ENST00000559831 TFCP2Q12800 502 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 GRAPQ13588 217 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 METTL24Q5JXM2 366 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
TPM1-221ENST00000559831 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.356e-7■■□□□ 13.8
TPM1-221ENST00000559831 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
TPM1-221ENST00000559831 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
TPM1-221ENST00000559831 SRGNP10124 158 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms