RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CMTR1Q8N1G2 835 aaKnown RBP7.5□□□□□ -1.21
SPG11-218ENST00000559754 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
SPG11-218ENST00000559754 XYLBO75191 536 aa7.49□□□□□ -1.21
SPG11-218ENST00000559754 SASH3O75995 380 aa7.49□□□□□ -1.21
SPG11-218ENST00000559754 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
SPG11-218ENST00000559754 NAA30Q147X3 362 aaPredicted RBP7.49□□□□□ -1.21
SPG11-218ENST00000559754 ETFBKMTQ8IXQ9 262 aa7.49□□□□□ -1.21
SPG11-218ENST00000559754 PIK3R5Q8WYR1 880 aa7.49□□□□□ -1.21
SPG11-218ENST00000559754 JPH1Q9HDC5 661 aaPredicted RBP7.49□□□□□ -1.21
SPG11-218ENST00000559754 RGS9O75916 674 aaPredicted RBP7.48□□□□□ -1.21
SPG11-218ENST00000559754 NID1P14543 1247 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 GPLD1P80108 840 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 TRIM28Q13263 835 aaKnown RBP7.48□□□□□ -1.21
SPG11-218ENST00000559754 PSAPL1Q6NUJ1 521 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 FRRS1LQ9P0K9 344 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 ZFATQ9P243 1243 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 STIM2Q9P246 746 aa7.48□□□□□ -1.21
SPG11-218ENST00000559754 TNFRSF10BO14763 440 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 APBA3O96018 575 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 PROCP04070 461 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 NRLP54845 237 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 COL9A3Q14050 684 aaPredicted RBP7.47□□□□□ -1.21
SPG11-218ENST00000559754 TRAPPC3LQ5T215 181 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 FAM35AQ86V20 835 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 NUDT8Q8WV74 236 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 NACC1Q96RE7 527 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 C1orf115Q9H7X2 142 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 TLR7Q9NYK1 1049 aaKnown RBP7.47□□□□□ -1.21
SPG11-218ENST00000559754 FNDC3AQ9Y2H6 1198 aaKnown RBP7.47□□□□□ -1.21
SPG11-218ENST00000559754 USP20Q9Y2K6 914 aa7.47□□□□□ -1.21
SPG11-218ENST00000559754 C1QTNF9BB2RNN3 333 aa7.46□□□□□ -1.22
SPG11-218ENST00000559754 PSAPP07602 524 aa7.46□□□□□ -1.22
SPG11-218ENST00000559754 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.22
SPG11-218ENST00000559754 CD163Q86VB7 1156 aa7.46□□□□□ -1.22
SPG11-218ENST00000559754 SLAIN2Q9P270 581 aa7.46□□□□□ -1.22
SPG11-218ENST00000559754 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
SPG11-218ENST00000559754 CPB1P15086 417 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 ZAP70P43403 619 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 RAC1P63000 192 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 PLAURQ03405 335 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 NLRP13Q86W25 1043 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 TTC9Q92623 222 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 NAGPAQ9UK23 515 aa7.45□□□□□ -1.22
SPG11-218ENST00000559754 TMEM88BA6NKF7 163 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 SOX18P35713 384 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 CHRNA4P43681 627 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 AFF1P51825 1210 aaKnown RBP7.44□□□□□ -1.22
SPG11-218ENST00000559754 LPIN3Q9BQK8 851 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 RBSNQ9H1K0 784 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 MTMR7Q9Y216 660 aa7.44□□□□□ -1.22
SPG11-218ENST00000559754 ZBTB42B2RXF5 422 aa7.43□□□□□ -1.22
SPG11-218ENST00000559754 HOXD8P13378 290 aaPredicted RBP7.43□□□□□ -1.22
SPG11-218ENST00000559754 SSFA2P28290 1259 aa7.43□□□□□ -1.22
SPG11-218ENST00000559754 BAG6P46379 1132 aa7.43□□□□□ -1.22
SPG11-218ENST00000559754 PERM1Q5SV97 790 aa7.43□□□□□ -1.22
SPG11-218ENST00000559754 HELQQ8TDG4 1101 aa7.43□□□□□ -1.22
SPG11-218ENST00000559754 SEPT3Q9UH03 358 aa7.43□□□□□ -1.22
SPG11-218ENST00000559754 MMP20O60882 483 aa7.42□□□□□ -1.22
SPG11-218ENST00000559754 GHRHP01286 108 aa7.42□□□□□ -1.22
SPG11-218ENST00000559754 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
SPG11-218ENST00000559754 EIF2AK2P19525 551 aaKnown RBP7.42□□□□□ -1.22
SPG11-218ENST00000559754 GATA4P43694 442 aa7.42□□□□□ -1.22
SPG11-218ENST00000559754 MLLT1Q03111 559 aaPredicted RBP7.42□□□□□ -1.22
SPG11-218ENST00000559754 FAM26DQ5JW98 314 aa7.42□□□□□ -1.22
SPG11-218ENST00000559754 GPR152Q8TDT2 470 aa7.42□□□□□ -1.22
SPG11-218ENST00000559754 A0A0A0MRY4 1105 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 C9orf172C9J069 976 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 ELNP15502 786 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 PCSK2P16519 638 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 SIK1P57059 783 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 SUZ12Q15022 739 aaKnown RBP7.41□□□□□ -1.22
SPG11-218ENST00000559754 TRIP4Q15650 581 aaPredicted RBP7.41□□□□□ -1.22
SPG11-218ENST00000559754 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 DTWD1Q8N5C7 304 aa7.41□□□□□ -1.22
SPG11-218ENST00000559754 ZBTB39O15060 712 aa7.4□□□□□ -1.22
SPG11-218ENST00000559754 TTC39BQ5VTQ0 682 aaPredicted RBP7.4□□□□□ -1.22
SPG11-218ENST00000559754 HFE2Q6ZVN8 426 aa7.4□□□□□ -1.22
SPG11-218ENST00000559754 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
SPG11-218ENST00000559754 TTC16Q8NEE8 873 aa7.4□□□□□ -1.22
SPG11-218ENST00000559754 SMG9Q9H0W8 520 aaKnown RBP7.4□□□□□ -1.22
SPG11-218ENST00000559754 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
SPG11-218ENST00000559754 NOM1Q5C9Z4 860 aaKnown RBP7.39□□□□□ -1.23
SPG11-218ENST00000559754 B4GALNT3Q6L9W6 998 aa7.39□□□□□ -1.23
SPG11-218ENST00000559754 ALKBH2Q6NS38 261 aa7.39□□□□□ -1.23
SPG11-218ENST00000559754 DMRTC2Q8IXT2 367 aaPredicted RBP7.39□□□□□ -1.23
SPG11-218ENST00000559754 FMR1NBQ8N0W7 255 aaPredicted RBP7.39□□□□□ -1.23
SPG11-218ENST00000559754 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
SPG11-218ENST00000559754 OR13H1Q8NG92 308 aa7.39□□□□□ -1.23
SPG11-218ENST00000559754 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
SPG11-218ENST00000559754 NSUN5Q96P11 429 aaKnown RBP7.39□□□□□ -1.23
SPG11-218ENST00000559754 J3QW42 95 aa7.38□□□□□ -1.23
SPG11-218ENST00000559754 ADAM23O75077 832 aa7.38□□□□□ -1.23
SPG11-218ENST00000559754 NRG1Q02297 640 aaPredicted RBP7.38□□□□□ -1.23
SPG11-218ENST00000559754 HYAL2Q12891 473 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms