RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 DDX46Q7L014 1031 aaKnown RBP24.73■■□□□ 1.55
SHF-205ENST00000559566 GRAPLQ8TC17 118 aaPredicted RBP24.73■■□□□ 1.55
SHF-205ENST00000559566 YTHDC1Q96MU7 727 aaKnown RBP24.73■■□□□ 1.55
SHF-205ENST00000559566 GRM8O00222 908 aa24.72■■□□□ 1.55
SHF-205ENST00000559566 CCDC93Q567U6 631 aa24.72■■□□□ 1.55
SHF-205ENST00000559566 EPHA10Q5JZY3 1008 aa24.72■■□□□ 1.55
SHF-205ENST00000559566 TTLL11Q8NHH1 800 aa24.72■■□□□ 1.55
SHF-205ENST00000559566 PLA2G12BQ9BX93 195 aa24.72■■□□□ 1.55
SHF-205ENST00000559566 TAF1P21675 1872 aa24.72■■□□□ 1.55
SHF-205ENST00000559566 KIF16BQ96L93 1317 aa24.71■■□□□ 1.55
SHF-205ENST00000559566 C9orf131Q5VYM1 1079 aa24.71■■□□□ 1.55
SHF-205ENST00000559566 NBPF7P0C2Y1 421 aaPredicted RBP24.7■■□□□ 1.54
SHF-205ENST00000559566 GREM2Q9H772 168 aa24.7■■□□□ 1.54
SHF-205ENST00000559566 CHD4Q14839 1912 aa24.7■■□□□ 1.54
SHF-205ENST00000559566 FER1L6Q2WGJ9 1857 aa24.7■■□□□ 1.54
SHF-205ENST00000559566 TRIM27P14373 513 aa24.69■■□□□ 1.54
SHF-205ENST00000559566 FOXO4P98177 505 aa24.69■■□□□ 1.54
SHF-205ENST00000559566 CCDC152Q4G0S7 254 aa24.69■■□□□ 1.54
SHF-205ENST00000559566 KAZALD1Q96I82 304 aa24.69■■□□□ 1.54
SHF-205ENST00000559566 API5Q9BZZ5 524 aaKnown RBP24.69■■□□□ 1.54
SHF-205ENST00000559566 ATP6V0A2Q9Y487 856 aa24.69■■□□□ 1.54
SHF-205ENST00000559566 UTYO14607 1347 aa24.68■■□□□ 1.54
SHF-205ENST00000559566 SOGA3Q5TF21 947 aa24.68■■□□□ 1.54
SHF-205ENST00000559566 ARHGAP45Q92619 1136 aa24.68■■□□□ 1.54
SHF-205ENST00000559566 FRAT1Q92837 279 aaPredicted RBP24.68■■□□□ 1.54
SHF-205ENST00000559566 SUCLG2Q96I99 432 aa24.68■■□□□ 1.54
SHF-205ENST00000559566 TAOK3Q9H2K8 898 aa24.68■■□□□ 1.54
SHF-205ENST00000559566 RNF181Q9P0P0 153 aa24.68■■□□□ 1.54
SHF-205ENST00000559566 LTBP3Q9NS15 1303 aa24.67■■□□□ 1.54
SHF-205ENST00000559566 BBOX1O75936 387 aa24.67■■□□□ 1.54
SHF-205ENST00000559566 CSF1RP07333 972 aa24.67■■□□□ 1.54
SHF-205ENST00000559566 HSP90B1P14625 803 aaKnown RBP24.67■■□□□ 1.54
SHF-205ENST00000559566 USP44Q9H0E7 712 aa24.67■■□□□ 1.54
SHF-205ENST00000559566 C9orf78Q9NZ63 289 aaPredicted RBP24.67■■□□□ 1.54
SHF-205ENST00000559566 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
SHF-205ENST00000559566 FAM161AQ3B820 660 aa24.66■■□□□ 1.54
SHF-205ENST00000559566 LMNB1P20700 586 aa24.65■■□□□ 1.54
SHF-205ENST00000559566 RPS8P62241 208 aaKnown RBP24.65■■□□□ 1.54
SHF-205ENST00000559566 ATF7IPQ6VMQ6 1270 aa24.65■■□□□ 1.54
SHF-205ENST00000559566 SP8Q8IXZ3 490 aa24.65■■□□□ 1.54
SHF-205ENST00000559566 ZNF277Q9NRM2 450 aaPredicted RBP24.65■■□□□ 1.54
SHF-205ENST00000559566 RTL9Q8NET4 1388 aa24.65■■□□□ 1.54
SHF-205ENST00000559566 CC2D2BQ6DHV5 1058 aa24.64■■□□□ 1.54
SHF-205ENST00000559566 RTKN2Q8IZC4 609 aa24.64■■□□□ 1.54
SHF-205ENST00000559566 CLUAP1Q96AJ1 413 aa24.64■■□□□ 1.54
SHF-205ENST00000559566 CCT4P50991 539 aaKnown RBP24.63■■□□□ 1.53
SHF-205ENST00000559566 SBF1O95248 1867 aa24.63■■□□□ 1.53
SHF-205ENST00000559566 LRRC37AA6NMS7 1700 aa24.63■■□□□ 1.53
SHF-205ENST00000559566 LMBR1LQ6UX01 489 aa24.62■■□□□ 1.53
SHF-205ENST00000559566 ZNF784Q8NCA9 323 aaPredicted RBP24.62■■□□□ 1.53
SHF-205ENST00000559566 DUOX1Q9NRD9 1551 aa24.62■■□□□ 1.53
SHF-205ENST00000559566 COL4A5P29400 1685 aa24.62■■□□□ 1.53
SHF-205ENST00000559566 IPO8O15397 1037 aaKnown RBP24.61■■□□□ 1.53
SHF-205ENST00000559566 ITGA6P23229 1130 aa24.61■■□□□ 1.53
SHF-205ENST00000559566 ZKSCAN2Q63HK3 967 aa24.61■■□□□ 1.53
SHF-205ENST00000559566 INTS3Q68E01 1043 aaKnown RBP24.61■■□□□ 1.53
SHF-205ENST00000559566 ANKRD44Q8N8A2 993 aa24.61■■□□□ 1.53
SHF-205ENST00000559566 PSMD1Q99460 953 aa24.61■■□□□ 1.53
SHF-205ENST00000559566 GPSM2P81274 684 aa24.6■■□□□ 1.53
SHF-205ENST00000559566 BICC1Q9H694 974 aaKnown RBP24.6■■□□□ 1.53
SHF-205ENST00000559566 MYH3P11055 1940 aa24.59■■□□□ 1.53
SHF-205ENST00000559566 RLBP1P12271 317 aa24.59■■□□□ 1.53
SHF-205ENST00000559566 TMC4Q7Z404 712 aa24.59■■□□□ 1.53
SHF-205ENST00000559566 ANKRD18AQ8IVF6 992 aa24.59■■□□□ 1.53
SHF-205ENST00000559566 MEIS3Q99687 375 aa24.59■■□□□ 1.53
SHF-205ENST00000559566 MPNDQ8N594 471 aa24.58■■□□□ 1.53
SHF-205ENST00000559566 TMEM57Q8N5G2 664 aa24.58■■□□□ 1.53
SHF-205ENST00000559566 CDC5LQ99459 802 aaKnown RBP24.58■■□□□ 1.53
SHF-205ENST00000559566 RTFDC1Q9BY42 306 aaPredicted RBP24.58■■□□□ 1.53
SHF-205ENST00000559566 RCAN3Q9UKA8 241 aa24.58■■□□□ 1.53
SHF-205ENST00000559566 CHMP3Q9Y3E7 222 aa24.58■■□□□ 1.53
SHF-205ENST00000559566 IARSP41252 1262 aaKnown RBP24.57■■□□□ 1.52
SHF-205ENST00000559566 RABL6Q3YEC7 729 aaPredicted RBP24.57■■□□□ 1.52
SHF-205ENST00000559566 DPP8Q6V1X1 898 aaPredicted RBP24.57■■□□□ 1.52
SHF-205ENST00000559566 ZNF526Q8TF50 670 aaPredicted RBP24.57■■□□□ 1.52
SHF-205ENST00000559566 LTBP1Q14766 1721 aa24.56■■□□□ 1.52
SHF-205ENST00000559566 ZNF594Q96JF6 807 aaPredicted RBP24.56■■□□□ 1.52
SHF-205ENST00000559566 GPR101Q96P66 508 aaPredicted RBP24.56■■□□□ 1.52
SHF-205ENST00000559566 TIAM2Q8IVF5 1701 aa24.55■■□□□ 1.52
SHF-205ENST00000559566 WTIPA6NIX2 430 aaPredicted RBP24.55■■□□□ 1.52
SHF-205ENST00000559566 GRIPAP1Q4V328 841 aa24.55■■□□□ 1.52
SHF-205ENST00000559566 POLLQ9UGP5 575 aa24.55■■□□□ 1.52
SHF-205ENST00000559566 NSFL1CQ9UNZ2 370 aaKnown RBP24.55■■□□□ 1.52
SHF-205ENST00000559566 CCDC88AQ3V6T2 1871 aa24.54■■□□□ 1.52
SHF-205ENST00000559566 ANKRD18BA2A2Z9 1011 aa24.54■■□□□ 1.52
SHF-205ENST00000559566 PLIN1O60240 522 aa24.54■■□□□ 1.52
SHF-205ENST00000559566 AOC3Q16853 763 aa24.54■■□□□ 1.52
SHF-205ENST00000559566 TMX4Q9H1E5 349 aaPredicted RBP24.54■■□□□ 1.52
SHF-205ENST00000559566 BSDC1Q9NW68 430 aaPredicted RBP24.54■■□□□ 1.52
SHF-205ENST00000559566 MINPP1Q9UNW1 487 aa24.54■■□□□ 1.52
SHF-205ENST00000559566 IFIT5Q13325 482 aaKnown RBP24.53■■□□□ 1.52
SHF-205ENST00000559566 SPEF2Q9C093 1822 aa24.52■■□□□ 1.52
SHF-205ENST00000559566 UBTFL1P0CB47 393 aaPredicted RBP24.52■■□□□ 1.52
SHF-205ENST00000559566 IGHMBP2P38935 993 aaKnown RBP24.52■■□□□ 1.52
SHF-205ENST00000559566 DZIP1LQ8IYY4 767 aaKnown RBP24.52■■□□□ 1.52
SHF-205ENST00000559566 TBC1D16Q8TBP0 767 aa24.52■■□□□ 1.52
SHF-205ENST00000559566 PANK1Q8TE04 598 aa24.52■■□□□ 1.52
SHF-205ENST00000559566 LRRFIP2Q9Y608 721 aaKnown RBP24.52■■□□□ 1.52
SHF-205ENST00000559566 PPIP5K2O43314 1243 aa24.51■■□□□ 1.51
SHF-205ENST00000559566 PODXL2Q9NZ53 605 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms