RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 LIG1P18858 919 aa19.71■□□□□ 0.75
SPG11-215ENST00000559193 USPL1Q5W0Q7 1092 aa19.71■□□□□ 0.75
SPG11-215ENST00000559193 KRT28Q7Z3Y7 464 aa19.71■□□□□ 0.75
SPG11-215ENST00000559193 CCDC192P0DO97 292 aa19.71■□□□□ 0.75
SPG11-215ENST00000559193 NOLC1Q14978 699 aaKnown RBP eCLIP19.71■□□□□ 0.75
SPG11-215ENST00000559193 C17orf53Q8N3J3 647 aaPredicted RBP19.71■□□□□ 0.75
SPG11-215ENST00000559193 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
SPG11-215ENST00000559193 JARID2Q92833 1246 aaPredicted RBP19.71■□□□□ 0.75
SPG11-215ENST00000559193 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
SPG11-215ENST00000559193 ATP5JP18859 108 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 PTPN12Q05209 780 aaKnown RBP19.7■□□□□ 0.74
SPG11-215ENST00000559193 TNNI3KQ59H18 835 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 FPGT-TNNI3KV9GXZ4 949 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 PHKG2P15735 406 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 ZC3H6P61129 1189 aaKnown RBP19.7■□□□□ 0.74
SPG11-215ENST00000559193 PLCB2Q00722 1185 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 STK3Q13188 491 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
SPG11-215ENST00000559193 TFCP2Q12800 502 aa19.69■□□□□ 0.74
SPG11-215ENST00000559193 CHMP3Q9Y3E7 222 aa19.69■□□□□ 0.74
SPG11-215ENST00000559193 MEGF6O75095 1541 aa19.69■□□□□ 0.74
SPG11-215ENST00000559193 PIP4K2AP48426 406 aaPredicted RBP19.69■□□□□ 0.74
SPG11-215ENST00000559193 NUP62CLQ9H1M0 184 aa19.69■□□□□ 0.74
SPG11-215ENST00000559193 NDUFB9Q9Y6M9 179 aa19.69■□□□□ 0.74
SPG11-215ENST00000559193 ZNF609O15014 1411 aa19.68■□□□□ 0.74
SPG11-215ENST00000559193 CHGBP05060 677 aa19.68■□□□□ 0.74
SPG11-215ENST00000559193 ANKRD13DQ6ZTN6 518 aa19.68■□□□□ 0.74
SPG11-215ENST00000559193 SPTLC3Q9NUV7 552 aa19.68■□□□□ 0.74
SPG11-215ENST00000559193 MAP3K11Q16584 847 aa19.68■□□□□ 0.74
SPG11-215ENST00000559193 DNTTIP2Q5QJE6 756 aaKnown RBP19.68■□□□□ 0.74
SPG11-215ENST00000559193 USP16Q9Y5T5 823 aa19.68■□□□□ 0.74
SPG11-215ENST00000559193 MST1RQ04912 1400 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 RFX7Q2KHR2 1363 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
SPG11-215ENST00000559193 SCAND2PQ9GZW5 306 aaPredicted RBP19.67■□□□□ 0.74
SPG11-215ENST00000559193 NLRP2Q9NX02 1062 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 MRVI1Q9Y6F6 885 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 KRT32Q14532 448 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 CAMK4Q16566 473 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 FAM200AQ8TCP9 573 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 KCNF1Q9H3M0 494 aa19.67■□□□□ 0.74
SPG11-215ENST00000559193 JAK2O60674 1132 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 TYRO3Q06418 890 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 UBE3BQ7Z3V4 1068 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 MYRIPQ8NFW9 859 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 LEO1Q8WVC0 666 aaPredicted RBP19.66■□□□□ 0.74
SPG11-215ENST00000559193 GTF3C6Q969F1 213 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 SPATA32Q96LK8 384 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 MAP7D2Q96T17 732 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 TFIP11Q9UBB9 837 aaKnown RBP19.66■□□□□ 0.74
SPG11-215ENST00000559193 KIF1AQ12756 1690 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 ALS2Q96Q42 1657 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 C1orf167Q5SNV9 1468 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
SPG11-215ENST00000559193 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 DACT1Q9NYF0 836 aa19.66■□□□□ 0.74
SPG11-215ENST00000559193 NEK1Q96PY6 1258 aa19.65■□□□□ 0.74
SPG11-215ENST00000559193 SEC62Q99442 399 aaKnown RBP19.65■□□□□ 0.74
SPG11-215ENST00000559193 AFDNP55196 1824 aaKnown RBP19.65■□□□□ 0.74
SPG11-215ENST00000559193 SNRPA1P09661 255 aaKnown RBP19.65■□□□□ 0.74
SPG11-215ENST00000559193 VSIG10Q8N0Z9 540 aa19.65■□□□□ 0.74
SPG11-215ENST00000559193 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
SPG11-215ENST00000559193 CKAP2LQ8IYA6 745 aa19.64■□□□□ 0.73
SPG11-215ENST00000559193 HAUS7Q99871 368 aa19.64■□□□□ 0.73
SPG11-215ENST00000559193 TNMDQ9H2S6 317 aa19.64■□□□□ 0.73
SPG11-215ENST00000559193 ARFGEF2Q9Y6D5 1785 aa19.64■□□□□ 0.73
SPG11-215ENST00000559193 CYP21A2P08686 494 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 RESTQ13127 1097 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 Q6ZUG5 572 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 SPC24Q8NBT2 197 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 PRIMPOLQ96LW4 560 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 PYCARDQ9ULZ3 195 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
SPG11-215ENST00000559193 ATP5J2-PTCD1G3V325 749 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
SPG11-215ENST00000559193 CASP7P55210 303 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 RBM43Q6ZSC3 357 aaKnown RBP19.63■□□□□ 0.73
SPG11-215ENST00000559193 TTC5Q8N0Z6 440 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 KIAA1524Q8TCG1 905 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 BRF1Q92994 677 aa19.63■□□□□ 0.73
SPG11-215ENST00000559193 DDX19AQ9NUU7 478 aaKnown RBP19.63■□□□□ 0.73
SPG11-215ENST00000559193 GOLGA6L4A6NEF3 574 aa19.62■□□□□ 0.73
SPG11-215ENST00000559193 LUZP1Q86V48 1076 aa19.62■□□□□ 0.73
SPG11-215ENST00000559193 PGBD1Q96JS3 809 aa19.62■□□□□ 0.73
SPG11-215ENST00000559193 CLSTN2Q9H4D0 955 aa19.62■□□□□ 0.73
SPG11-215ENST00000559193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.62■□□□□ 0.733e-7■■■□□ 18.7
SPG11-215ENST00000559193 GLI3P10071 1580 aa19.62■□□□□ 0.73
SPG11-215ENST00000559193 ABCC6O95255 1503 aa19.62■□□□□ 0.73
SPG11-215ENST00000559193 DDX46Q7L014 1031 aaKnown RBP19.62■□□□□ 0.73
SPG11-215ENST00000559193 A0A087WZG4 1122 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 MCMDC2Q4G0Z9 681 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 CYP27B1O15528 508 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 TPM3P06753 285 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 ANO6Q4KMQ2 910 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 STOX1Q6ZVD7 989 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 CBX8Q9HC52 389 aa19.61■□□□□ 0.73
SPG11-215ENST00000559193 NR1I2O75469 434 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms