RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 RFX5P48382 616 aaPredicted RBP22.48■■□□□ 1.19
CLPX-203ENST00000558958 GCC1Q96CN9 775 aa22.48■■□□□ 1.19
CLPX-203ENST00000558958 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
CLPX-203ENST00000558958 ST5P78524 1137 aa22.47■■□□□ 1.19
CLPX-203ENST00000558958 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
CLPX-203ENST00000558958 C3orf67Q6ZVT6 689 aa22.47■■□□□ 1.19
CLPX-203ENST00000558958 NRXN2Q9P2S2 1712 aa22.47■■□□□ 1.19
CLPX-203ENST00000558958 SF3B3Q15393 1217 aaKnown RBP22.47■■□□□ 1.19
CLPX-203ENST00000558958 NLRP3Q96P20 1036 aa22.47■■□□□ 1.19
CLPX-203ENST00000558958 CCDC85AQ96PX6 553 aaPredicted RBP22.47■■□□□ 1.19
CLPX-203ENST00000558958 GREM2Q9H772 168 aa22.47■■□□□ 1.19
CLPX-203ENST00000558958 NOP58Q9Y2X3 529 aaKnown RBP22.47■■□□□ 1.19
CLPX-203ENST00000558958 PTPN12Q05209 780 aaKnown RBP22.46■■□□□ 1.19
CLPX-203ENST00000558958 CCDC57Q2TAC2 916 aa22.46■■□□□ 1.19
CLPX-203ENST00000558958 CCDC152Q4G0S7 254 aa22.46■■□□□ 1.19
CLPX-203ENST00000558958 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
CLPX-203ENST00000558958 RTL9Q8NET4 1388 aa22.45■■□□□ 1.18
CLPX-203ENST00000558958 SURF6O75683 361 aaKnown RBP22.45■■□□□ 1.18
CLPX-203ENST00000558958 IFIT5Q13325 482 aaKnown RBP22.45■■□□□ 1.18
CLPX-203ENST00000558958 KLHDC4Q8TBB5 520 aa22.45■■□□□ 1.18
CLPX-203ENST00000558958 PA2G4Q9UQ80 394 aaKnown RBP22.45■■□□□ 1.18
CLPX-203ENST00000558958 PSDA5PKW4 1024 aaPredicted RBP22.44■■□□□ 1.18
CLPX-203ENST00000558958 ITGA6P23229 1130 aa22.44■■□□□ 1.18
CLPX-203ENST00000558958 MTFR1LQ9H019 292 aa22.44■■□□□ 1.18
CLPX-203ENST00000558958 EXOC6BQ9Y2D4 811 aa22.44■■□□□ 1.18
CLPX-203ENST00000558958 ZBTB7AO95365 584 aa22.43■■□□□ 1.18
CLPX-203ENST00000558958 TNRC6CQ9HCJ0 1690 aaKnown RBP22.42■■□□□ 1.18
CLPX-203ENST00000558958 ANKRD18BA2A2Z9 1011 aa22.42■■□□□ 1.18
CLPX-203ENST00000558958 BRIP1Q9BX63 1249 aa22.42■■□□□ 1.18
CLPX-203ENST00000558958 HSP90AB4PQ58FF6 505 aa22.41■■□□□ 1.18
CLPX-203ENST00000558958 KLRG2A4D1S0 409 aaPredicted RBP22.41■■□□□ 1.18
CLPX-203ENST00000558958 RAB11FIP3O75154 756 aa22.41■■□□□ 1.18
CLPX-203ENST00000558958 CRY2Q49AN0 593 aa22.41■■□□□ 1.18
CLPX-203ENST00000558958 ZNF594Q96JF6 807 aaPredicted RBP22.41■■□□□ 1.18
CLPX-203ENST00000558958 SEC31BQ9NQW1 1179 aa22.41■■□□□ 1.18
CLPX-203ENST00000558958 NUCB1Q02818 461 aa22.4■■□□□ 1.18
CLPX-203ENST00000558958 G3BP1Q13283 466 aaKnown RBP eCLIP22.4■■□□□ 1.18
CLPX-203ENST00000558958 SIL1Q9H173 461 aa22.4■■□□□ 1.18
CLPX-203ENST00000558958 TAF7LQ5H9L4 462 aa22.39■■□□□ 1.17
CLPX-203ENST00000558958 ANKRD45Q5TZF3 282 aa22.39■■□□□ 1.17
CLPX-203ENST00000558958 PDZRN3Q9UPQ7 1066 aa22.39■■□□□ 1.17
CLPX-203ENST00000558958 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
CLPX-203ENST00000558958 APBB1O00213 710 aa22.38■■□□□ 1.17
CLPX-203ENST00000558958 FBXO3Q9UK99 471 aa22.38■■□□□ 1.17
CLPX-203ENST00000558958 ANKRD31Q8N7Z5 1873 aa22.37■■□□□ 1.17
CLPX-203ENST00000558958 EYA2O00167 538 aa22.37■■□□□ 1.17
CLPX-203ENST00000558958 CIAO1O76071 339 aa22.37■■□□□ 1.17
CLPX-203ENST00000558958 OS9Q13438 667 aaPredicted RBP22.37■■□□□ 1.17
CLPX-203ENST00000558958 ATG9AQ7Z3C6 839 aa22.37■■□□□ 1.17
CLPX-203ENST00000558958 ERC1Q8IUD2 1116 aa22.37■■□□□ 1.17
CLPX-203ENST00000558958 CDC5LQ99459 802 aaKnown RBP22.37■■□□□ 1.17
CLPX-203ENST00000558958 LRRCC1Q9C099 1032 aa22.37■■□□□ 1.17
CLPX-203ENST00000558958 PDE6BP35913 854 aa22.36■■□□□ 1.17
CLPX-203ENST00000558958 DDX46Q7L014 1031 aaKnown RBP22.36■■□□□ 1.17
CLPX-203ENST00000558958 CHD1LQ86WJ1 897 aa22.36■■□□□ 1.17
CLPX-203ENST00000558958 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
CLPX-203ENST00000558958 KIF1BPQ96EK5 621 aa22.36■■□□□ 1.17
CLPX-203ENST00000558958 PUS3Q9BZE2 481 aaKnown RBP22.36■■□□□ 1.17
CLPX-203ENST00000558958 SASH1O94885 1247 aa22.35■■□□□ 1.17
CLPX-203ENST00000558958 POLD1P28340 1107 aa22.35■■□□□ 1.17
CLPX-203ENST00000558958 LRRC24Q50LG9 513 aa22.35■■□□□ 1.17
CLPX-203ENST00000558958 LDHAL6AQ6ZMR3 332 aa22.35■■□□□ 1.17
CLPX-203ENST00000558958 HOXA10P31260 410 aaPredicted RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 IGHMBP2P38935 993 aaKnown RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 IL15P40933 162 aaPredicted RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 RPGRQ92834 1020 aaKnown RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 SGIP1Q9BQI5 828 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 LRP5O75197 1615 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 SMARCA5O60264 1052 aaPredicted RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 C10orf71Q711Q0 1435 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 ANKRD18AQ8IVF6 992 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 CELF1Q92879 486 aaKnown RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 MPHOSPH8Q99549 860 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 LNPKQ9C0E8 428 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
CLPX-203ENST00000558958 RIPOR2Q9Y4F9 1068 aa22.34■■□□□ 1.17
CLPX-203ENST00000558958 COL4A1P02462 1669 aa22.33■■□□□ 1.17
CLPX-203ENST00000558958 SRGNP10124 158 aa22.33■■□□□ 1.16
CLPX-203ENST00000558958 RPS8P62241 208 aaKnown RBP22.33■■□□□ 1.16
CLPX-203ENST00000558958 RBM17Q96I25 401 aaKnown RBP22.33■■□□□ 1.16
CLPX-203ENST00000558958 CNNM1Q9NRU3 951 aa22.33■■□□□ 1.16
CLPX-203ENST00000558958 GRAPQ13588 217 aa22.32■■□□□ 1.16
CLPX-203ENST00000558958 GRAPLQ8TC17 118 aaPredicted RBP22.32■■□□□ 1.16
CLPX-203ENST00000558958 NPR1P16066 1061 aa22.31■■□□□ 1.16
CLPX-203ENST00000558958 PTGER2P43116 358 aa22.31■■□□□ 1.16
CLPX-203ENST00000558958 SKAP1Q86WV1 359 aa22.31■■□□□ 1.16
CLPX-203ENST00000558958 CRAMP1Q96RY5 1269 aa22.31■■□□□ 1.16
CLPX-203ENST00000558958 IL1RAPL2Q9NP60 686 aa22.31■■□□□ 1.16
CLPX-203ENST00000558958 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
CLPX-203ENST00000558958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.31■■□□□ 1.16
CLPX-203ENST00000558958 TAF1P21675 1872 aa22.31■■□□□ 1.16
CLPX-203ENST00000558958 TFCP2Q12800 502 aa22.3■■□□□ 1.16
CLPX-203ENST00000558958 PDE4AP27815 886 aa22.29■■□□□ 1.16
CLPX-203ENST00000558958 C2CD5Q86YS7 1000 aa22.29■■□□□ 1.16
CLPX-203ENST00000558958 H0YIN7 160 aa22.28■■□□□ 1.16
CLPX-203ENST00000558958 SOCS7O14512 581 aa22.28■■□□□ 1.16
CLPX-203ENST00000558958 CLASRPQ8N2M8 674 aaKnown RBP22.28■■□□□ 1.16
CLPX-203ENST00000558958 MASTLQ96GX5 879 aa22.28■■□□□ 1.16
CLPX-203ENST00000558958 CEP126Q9P2H0 1117 aa22.28■■□□□ 1.16
CLPX-203ENST00000558958 MROH5Q6ZUA9 1318 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms