RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 ZNF541Q9H0D2 1346 aa27.53■■■□□ 2
CRNDE-205ENST00000558952 IQCA1LA6NCM1 817 aa27.53■■■□□ 2
CRNDE-205ENST00000558952 EXOSC9Q06265 439 aaKnown RBP27.53■■■□□ 2
CRNDE-205ENST00000558952 DPP8Q6V1X1 898 aaPredicted RBP27.53■■■□□ 2
CRNDE-205ENST00000558952 SLC51AQ86UW1 340 aa27.53■■■□□ 2
CRNDE-205ENST00000558952 FZD9O00144 591 aa27.52■■■□□ 2
CRNDE-205ENST00000558952 PCCAP05165 728 aaPredicted RBP27.52■■■□□ 2
CRNDE-205ENST00000558952 EIF6P56537 245 aaKnown RBP27.52■■■□□ 2
CRNDE-205ENST00000558952 PPIP5K2O43314 1243 aa27.51■■□□□ 1.99
CRNDE-205ENST00000558952 MPNDQ8N594 471 aa27.51■■□□□ 1.99
CRNDE-205ENST00000558952 L3MBTL3Q96JM7 780 aaPredicted RBP27.51■■□□□ 1.99
CRNDE-205ENST00000558952 VPS33BQ9H267 617 aa27.51■■□□□ 1.99
CRNDE-205ENST00000558952 VAMP4O75379 141 aa27.5■■□□□ 1.99
CRNDE-205ENST00000558952 G2E3Q7L622 706 aa27.5■■□□□ 1.99
CRNDE-205ENST00000558952 NIM1KQ8IY84 436 aa27.5■■□□□ 1.99
CRNDE-205ENST00000558952 FLIIQ13045 1269 aa27.49■■□□□ 1.99
CRNDE-205ENST00000558952 SPINK5Q9NQ38 1064 aaPredicted RBP27.49■■□□□ 1.99
CRNDE-205ENST00000558952 FKBP5Q13451 457 aaPredicted RBP27.48■■□□□ 1.99
CRNDE-205ENST00000558952 GPC2Q8N158 579 aa27.48■■□□□ 1.99
CRNDE-205ENST00000558952 CELF1Q92879 486 aaKnown RBP27.48■■□□□ 1.99
CRNDE-205ENST00000558952 RTFDC1Q9BY42 306 aaPredicted RBP27.48■■□□□ 1.99
CRNDE-205ENST00000558952 PDE8AO60658 829 aa27.47■■□□□ 1.99
CRNDE-205ENST00000558952 AOC3Q16853 763 aa27.47■■□□□ 1.99
CRNDE-205ENST00000558952 IGKV5-2P06315 115 aa27.46■■□□□ 1.99
CRNDE-205ENST00000558952 CCDC152Q4G0S7 254 aa27.46■■□□□ 1.99
CRNDE-205ENST00000558952 JARID2Q92833 1246 aaPredicted RBP27.46■■□□□ 1.99
CRNDE-205ENST00000558952 HACL1Q9UJ83 578 aa27.46■■□□□ 1.99
CRNDE-205ENST00000558952 CDHR2Q9BYE9 1310 aa27.45■■□□□ 1.99
CRNDE-205ENST00000558952 GJA3Q9Y6H8 435 aa27.45■■□□□ 1.98
CRNDE-205ENST00000558952 COL4A5P29400 1685 aa27.45■■□□□ 1.98
CRNDE-205ENST00000558952 SCN4AP35499 1836 aa27.44■■□□□ 1.98
CRNDE-205ENST00000558952 CWF19L2Q2TBE0 894 aaKnown RBP27.44■■□□□ 1.98
CRNDE-205ENST00000558952 TAF1DQ9H5J8 278 aaPredicted RBP27.44■■□□□ 1.98
CRNDE-205ENST00000558952 TAF1P21675 1872 aa27.43■■□□□ 1.98
CRNDE-205ENST00000558952 NEURL1BA8MQ27 555 aa27.43■■□□□ 1.98
CRNDE-205ENST00000558952 RPS8P62241 208 aaKnown RBP27.43■■□□□ 1.98
CRNDE-205ENST00000558952 NSFL1CQ9UNZ2 370 aaKnown RBP27.43■■□□□ 1.98
CRNDE-205ENST00000558952 LRRC37AA6NMS7 1700 aa27.42■■□□□ 1.98
CRNDE-205ENST00000558952 CHADLQ6NUI6 762 aa27.42■■□□□ 1.98
CRNDE-205ENST00000558952 DNAAF4Q8WXU2 420 aa27.42■■□□□ 1.98
CRNDE-205ENST00000558952 ZNF521Q96K83 1311 aa27.41■■□□□ 1.98
CRNDE-205ENST00000558952 LMOD1P29536 600 aaPredicted RBP27.41■■□□□ 1.98
CRNDE-205ENST00000558952 KIAA2012Q0VF49 1180 aa27.41■■□□□ 1.98
CRNDE-205ENST00000558952 EAPPQ56P03 285 aaPredicted RBP27.41■■□□□ 1.98
CRNDE-205ENST00000558952 ZNRF3Q9ULT6 936 aa27.41■■□□□ 1.98
CRNDE-205ENST00000558952 EPHX2P34913 555 aa27.4■■□□□ 1.98
CRNDE-205ENST00000558952 LDHDQ86WU2 507 aa27.4■■□□□ 1.98
CRNDE-205ENST00000558952 CCDC85AQ96PX6 553 aaPredicted RBP27.4■■□□□ 1.98
CRNDE-205ENST00000558952 SEC31BQ9NQW1 1179 aa27.4■■□□□ 1.98
CRNDE-205ENST00000558952 CCER2I3L3R5 266 aa27.39■■□□□ 1.98
CRNDE-205ENST00000558952 CTSWP56202 376 aa27.39■■□□□ 1.98
CRNDE-205ENST00000558952 PNMA8AQ86V59 439 aaPredicted RBP27.39■■□□□ 1.98
CRNDE-205ENST00000558952 CACNA1FO60840 1977 aa27.39■■□□□ 1.97
CRNDE-205ENST00000558952 C6orf229H3BNL8 230 aa27.38■■□□□ 1.97
CRNDE-205ENST00000558952 POTEIP0CG38 1075 aa27.38■■□□□ 1.97
CRNDE-205ENST00000558952 POTEJP0CG39 1038 aa27.38■■□□□ 1.97
CRNDE-205ENST00000558952 UBE3BQ7Z3V4 1068 aa27.38■■□□□ 1.97
CRNDE-205ENST00000558952 LINS1Q8NG48 757 aa27.38■■□□□ 1.97
CRNDE-205ENST00000558952 GPSM2P81274 684 aa27.37■■□□□ 1.97
CRNDE-205ENST00000558952 GCKRQ14397 625 aa27.37■■□□□ 1.97
CRNDE-205ENST00000558952 WASHC4Q2M389 1173 aa27.37■■□□□ 1.97
CRNDE-205ENST00000558952 ANKRD18AQ8IVF6 992 aa27.37■■□□□ 1.97
CRNDE-205ENST00000558952 CLEC11AQ9Y240 323 aa27.37■■□□□ 1.97
CRNDE-205ENST00000558952 DUOX1Q9NRD9 1551 aa27.36■■□□□ 1.97
CRNDE-205ENST00000558952 E9PSI1 815 aa27.36■■□□□ 1.97
CRNDE-205ENST00000558952 CDC5LQ99459 802 aaKnown RBP27.36■■□□□ 1.97
CRNDE-205ENST00000558952 EYA3Q99504 573 aa27.36■■□□□ 1.97
CRNDE-205ENST00000558952 COL4A1P02462 1669 aa27.36■■□□□ 1.97
CRNDE-205ENST00000558952 H7C1W4 665 aa27.35■■□□□ 1.97
CRNDE-205ENST00000558952 HTRA3P83110 453 aa27.35■■□□□ 1.97
CRNDE-205ENST00000558952 ANKIB1Q9P2G1 1089 aa27.35■■□□□ 1.97
CRNDE-205ENST00000558952 CXCL9Q07325 125 aa27.34■■□□□ 1.97
CRNDE-205ENST00000558952 CIAPIN1Q6FI81 312 aa27.34■■□□□ 1.97
CRNDE-205ENST00000558952 TTLL11Q8NHH1 800 aa27.34■■□□□ 1.97
CRNDE-205ENST00000558952 SCNN1DP51172 638 aa27.33■■□□□ 1.97
CRNDE-205ENST00000558952 TNIP1Q15025 636 aa27.33■■□□□ 1.97
CRNDE-205ENST00000558952 POLLQ9UGP5 575 aa27.33■■□□□ 1.97
CRNDE-205ENST00000558952 F6X3S4 739 aa27.32■■□□□ 1.96
CRNDE-205ENST00000558952 RIMBP2O15034 1052 aa27.32■■□□□ 1.96
CRNDE-205ENST00000558952 DNAJC5GQ8N7S2 189 aa27.32■■□□□ 1.96
CRNDE-205ENST00000558952 TBC1D16Q8TBP0 767 aa27.32■■□□□ 1.96
CRNDE-205ENST00000558952 PODXL2Q9NZ53 605 aa27.32■■□□□ 1.96
CRNDE-205ENST00000558952 RAD17O75943 681 aa27.31■■□□□ 1.96
CRNDE-205ENST00000558952 GREM2Q9H772 168 aa27.31■■□□□ 1.96
CRNDE-205ENST00000558952 GGA1Q9UJY5 639 aa27.31■■□□□ 1.96
CRNDE-205ENST00000558952 CEP350Q5VT06 3117 aa27.3■■□□□ 1.96
CRNDE-205ENST00000558952 UFL1O94874 794 aa27.3■■□□□ 1.96
CRNDE-205ENST00000558952 PLA2G12BQ9BX93 195 aa27.3■■□□□ 1.96
CRNDE-205ENST00000558952 BCL2L13Q9BXK5 485 aa27.3■■□□□ 1.96
CRNDE-205ENST00000558952 ZC3H12CQ9C0D7 883 aaKnown RBP27.3■■□□□ 1.96
CRNDE-205ENST00000558952 RTL9Q8NET4 1388 aa27.3■■□□□ 1.96
CRNDE-205ENST00000558952 EPS15P42566 896 aa27.29■■□□□ 1.96
CRNDE-205ENST00000558952 KLRG1Q96E93 195 aa27.29■■□□□ 1.96
CRNDE-205ENST00000558952 DBNDD1Q9H9R9 158 aa27.29■■□□□ 1.96
CRNDE-205ENST00000558952 MYH3P11055 1940 aa27.29■■□□□ 1.96
CRNDE-205ENST00000558952 LTBP1Q14766 1721 aa27.28■■□□□ 1.96
CRNDE-205ENST00000558952 XDHP47989 1333 aa27.28■■□□□ 1.96
CRNDE-205ENST00000558952 G3V3G9 751 aa27.28■■□□□ 1.96
CRNDE-205ENST00000558952 SLFN5Q08AF3 891 aa27.28■■□□□ 1.96
CRNDE-205ENST00000558952 BEND3Q5T5X7 828 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms