RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 GPATCH8Q9UKJ3 1502 aaKnown RBP9.26□□□□□ -0.93
LRRC28-209ENST00000558861 ZAP70P43403 619 aa9.26□□□□□ -0.93
LRRC28-209ENST00000558861 AAMPQ13685 434 aa9.26□□□□□ -0.93
LRRC28-209ENST00000558861 DNAJC14Q6Y2X3 702 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-209ENST00000558861 CRISPLD1Q9H336 500 aa9.26□□□□□ -0.93
LRRC28-209ENST00000558861 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
LRRC28-209ENST00000558861 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
LRRC28-209ENST00000558861 HIF1AQ16665 826 aa9.25□□□□□ -0.93
LRRC28-209ENST00000558861 ALKBH2Q6NS38 261 aa9.25□□□□□ -0.93
LRRC28-209ENST00000558861 RIPOR1Q6ZS17 1223 aa9.25□□□□□ -0.93
LRRC28-209ENST00000558861 DMGDHQ9UI17 866 aaKnown RBP9.25□□□□□ -0.93
LRRC28-209ENST00000558861 DCTN4Q9UJW0 460 aa9.25□□□□□ -0.93
LRRC28-209ENST00000558861 NCOA2Q15596 1464 aa9.25□□□□□ -0.93
LRRC28-209ENST00000558861 NEO1Q92859 1461 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 MICAL2O94851 1124 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 THBS1P07996 1170 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 IER5Q5VY09 327 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 PGBD3Q8N328 593 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 NEUROD4Q9HD90 331 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-209ENST00000558861 ANKIB1Q9P2G1 1089 aa9.24□□□□□ -0.93
LRRC28-209ENST00000558861 TEX14Q8IWB6 1497 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 NDUFB5O43674 189 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 IDH3AP50213 366 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 DNM1Q05193 864 aaKnown RBP9.23□□□□□ -0.93
LRRC28-209ENST00000558861 BTLAQ7Z6A9 289 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 CCDC155Q8N6L0 562 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-209ENST00000558861 EDEM1Q92611 657 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 BRPF3Q9ULD4 1205 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 GJA3Q9Y6H8 435 aa9.23□□□□□ -0.93
LRRC28-209ENST00000558861 POTECB2RU33 542 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 C11orf95C9JLR9 678 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-209ENST00000558861 TYRO3Q06418 890 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 POLIQ9UNA4 740 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 USP20Q9Y2K6 914 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 PREX2Q70Z35 1606 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 PHLDB1Q86UU1 1377 aa9.22□□□□□ -0.93
LRRC28-209ENST00000558861 FANCAO15360 1455 aa9.21□□□□□ -0.93
LRRC28-209ENST00000558861 OPLAHO14841 1288 aa9.21□□□□□ -0.94
LRRC28-209ENST00000558861 CDC42BPAQ5VT25 1732 aa9.21□□□□□ -0.94
LRRC28-209ENST00000558861 CDC42BPBQ9Y5S2 1711 aa9.21□□□□□ -0.94
LRRC28-209ENST00000558861 AKNAQ7Z591 1439 aa9.21□□□□□ -0.94
LRRC28-209ENST00000558861 ARHGEF12Q9NZN5 1544 aa9.21□□□□□ -0.94
LRRC28-209ENST00000558861 TSPOAP1O95153 1857 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 ANKRD33BA6NCL7 494 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 PDGFAP04085 211 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 INPP5BP32019 993 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 EFHC2Q5JST6 749 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 NLRP8Q86W28 1048 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 ASB16Q96NS5 453 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 RBCK1Q9BYM8 510 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 CCNB3Q8WWL7 1395 aa9.2□□□□□ -0.94
LRRC28-209ENST00000558861 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
LRRC28-209ENST00000558861 MZF1P28698 734 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-209ENST00000558861 GRNP28799 593 aaKnown RBP9.19□□□□□ -0.94
LRRC28-209ENST00000558861 ARSDP51689 593 aa9.19□□□□□ -0.94
LRRC28-209ENST00000558861 DBN1Q16643 649 aa9.19□□□□□ -0.94
LRRC28-209ENST00000558861 TMC7Q7Z402 723 aa9.19□□□□□ -0.94
LRRC28-209ENST00000558861 NUDT16Q96DE0 195 aaKnown RBP9.19□□□□□ -0.94
LRRC28-209ENST00000558861 ZCCHC2Q9C0B9 1178 aaKnown RBP9.19□□□□□ -0.94
LRRC28-209ENST00000558861 NUCKS1Q9H1E3 243 aaKnown RBP9.19□□□□□ -0.94
LRRC28-209ENST00000558861 MYOM3Q5VTT5 1437 aa9.19□□□□□ -0.94
LRRC28-209ENST00000558861 FRMPD1Q5SYB0 1578 aa9.19□□□□□ -0.94
LRRC28-209ENST00000558861 MYO5CQ9NQX4 1742 aa9.19□□□□□ -0.94
LRRC28-209ENST00000558861 ITGA6P23229 1130 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 ABCC1P33527 1531 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 UBAP2LQ14157 1087 aaKnown RBP9.18□□□□□ -0.94
LRRC28-209ENST00000558861 SAMD5Q5TGI4 173 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 NPAS4Q8IUM7 802 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 TRIM22Q8IYM9 498 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 GJD3Q8N144 294 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 ZNF837Q96EG3 531 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-209ENST00000558861 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-209ENST00000558861 MBD5Q9P267 1494 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
LRRC28-209ENST00000558861 ARHGAP5Q13017 1502 aa9.17□□□□□ -0.94
LRRC28-209ENST00000558861 POGZQ7Z3K3 1410 aa9.17□□□□□ -0.94
LRRC28-209ENST00000558861 MIA2Q96PC5 1412 aa9.17□□□□□ -0.94
LRRC28-209ENST00000558861 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
LRRC28-209ENST00000558861 LBRQ14739 615 aaKnown RBP9.17□□□□□ -0.94
LRRC28-209ENST00000558861 TRIP4Q15650 581 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-209ENST00000558861 ZSCAN29Q8IWY8 852 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-209ENST00000558861 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
LRRC28-209ENST00000558861 BRD7Q9NPI1 651 aa9.17□□□□□ -0.94
LRRC28-209ENST00000558861 RTCBQ9Y3I0 505 aaKnown RBP9.17□□□□□ -0.94
LRRC28-209ENST00000558861 ADGRL1O94910 1474 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 SCAPERQ9BY12 1400 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 TRAPPC8Q9Y2L5 1435 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 A6NHS1 94 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 GPR182O15218 404 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-209ENST00000558861 IGHA2P01877 340 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 PIK3R5Q8WYR1 880 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms