RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
SMAD3-207ENST00000558763 ANP32EQ9BTT0 268 aa15.88■□□□□ 0.13
SMAD3-207ENST00000558763 OS9Q13438 667 aaPredicted RBP15.87■□□□□ 0.13
SMAD3-207ENST00000558763 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
SMAD3-207ENST00000558763 ERICH6Q7L0X2 663 aa15.87■□□□□ 0.13
SMAD3-207ENST00000558763 TBC1D2Q9BYX2 928 aa15.87■□□□□ 0.13
SMAD3-207ENST00000558763 NIP7Q9Y221 180 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMAD3-207ENST00000558763 TTC41PQ6P2S7 1318 aa15.87■□□□□ 0.13
SMAD3-207ENST00000558763 UBN2Q6ZU65 1347 aa15.87■□□□□ 0.13
SMAD3-207ENST00000558763 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
SMAD3-207ENST00000558763 LMBR1LQ6UX01 489 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
SMAD3-207ENST00000558763 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
SMAD3-207ENST00000558763 SIL1Q9H173 461 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 MYH3P11055 1940 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 G3BP1Q13283 466 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMAD3-207ENST00000558763 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 USP26Q9BXU7 913 aa15.86■□□□□ 0.13
SMAD3-207ENST00000558763 GYS1P13807 737 aa15.85■□□□□ 0.13
SMAD3-207ENST00000558763 CHMLP26374 656 aa15.85■□□□□ 0.13
SMAD3-207ENST00000558763 NLRP10Q86W26 655 aa15.85■□□□□ 0.13
SMAD3-207ENST00000558763 ZNF34Q8IZ26 560 aa15.85■□□□□ 0.13
SMAD3-207ENST00000558763 TLR7Q9NYK1 1049 aaKnown RBP15.84■□□□□ 0.13
SMAD3-207ENST00000558763 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-207ENST00000558763 AACSQ86V21 672 aa15.84■□□□□ 0.13
SMAD3-207ENST00000558763 PDGFDQ9GZP0 370 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-207ENST00000558763 IL25Q9H293 177 aa15.84■□□□□ 0.13
SMAD3-207ENST00000558763 ESYT1Q9BSJ8 1104 aa15.83■□□□□ 0.12
SMAD3-207ENST00000558763 PLA2G12BQ9BX93 195 aa15.83■□□□□ 0.12
SMAD3-207ENST00000558763 ECHDC1Q9NTX5 307 aa15.83■□□□□ 0.12
SMAD3-207ENST00000558763 ERC2O15083 957 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 RGL2O15211 777 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 ATG9AQ7Z3C6 839 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 GLRX3O76003 335 aaKnown RBP15.82■□□□□ 0.12
SMAD3-207ENST00000558763 BECN1Q14457 450 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 MSL1Q68DK7 614 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 ZBTB38Q8NAP3 1195 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-207ENST00000558763 RILPL2Q969X0 211 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 FAM89AQ96GI7 184 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
SMAD3-207ENST00000558763 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
SMAD3-207ENST00000558763 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
SMAD3-207ENST00000558763 MAP4K4O95819 1239 aaPredicted RBP15.81■□□□□ 0.12
SMAD3-207ENST00000558763 NFIXQ14938 502 aa15.81■□□□□ 0.12
SMAD3-207ENST00000558763 PARP10Q53GL7 1025 aa15.81■□□□□ 0.12
SMAD3-207ENST00000558763 SYNE4Q8N205 404 aa15.81■□□□□ 0.12
SMAD3-207ENST00000558763 IFIT2P09913 472 aaKnown RBP15.8■□□□□ 0.12
SMAD3-207ENST00000558763 TFCP2Q12800 502 aa15.8■□□□□ 0.12
SMAD3-207ENST00000558763 CCDC8Q9H0W5 538 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-207ENST00000558763 R3HDM1Q15032 1099 aaKnown RBP15.8■□□□□ 0.12
SMAD3-207ENST00000558763 SNX21Q969T3 373 aa15.8■□□□□ 0.12
SMAD3-207ENST00000558763 UTP14AQ9BVJ6 771 aaKnown RBP15.8■□□□□ 0.12
SMAD3-207ENST00000558763 DBNLQ9UJU6 430 aaKnown RBP15.8■□□□□ 0.12
SMAD3-207ENST00000558763 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
SMAD3-207ENST00000558763 LRP5O75197 1615 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 CARMIL3Q8ND23 1372 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 REC8O95072 547 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 CD2BP2O95400 341 aaKnown RBP15.79■□□□□ 0.12
SMAD3-207ENST00000558763 NTSR2O95665 410 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 CSF1RP07333 972 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 FPGT-TNNI3KV9GXZ4 949 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 LAMB2P55268 1798 aa15.79■□□□□ 0.12
SMAD3-207ENST00000558763 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-207ENST00000558763 ANTXR1Q9H6X2 564 aa15.78■□□□□ 0.12
SMAD3-207ENST00000558763 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-207ENST00000558763 NPHP1O15259 732 aa15.78■□□□□ 0.12
SMAD3-207ENST00000558763 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
SMAD3-207ENST00000558763 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
SMAD3-207ENST00000558763 ZNF594Q96JF6 807 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-207ENST00000558763 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-207ENST00000558763 ZNF609O15014 1411 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 SH3TC1Q8TE82 1336 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 DDR1Q08345 913 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 LRRC24Q50LG9 513 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 CCDC24Q8N4L8 307 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 GPATCH3Q96I76 525 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
SMAD3-207ENST00000558763 IRS4O14654 1257 aaPredicted RBP15.76■□□□□ 0.11
SMAD3-207ENST00000558763 CIAO1O76071 339 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 GTF2E1P29083 439 aaPredicted RBP15.76■□□□□ 0.11
SMAD3-207ENST00000558763 TM4SF1P30408 202 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 EYA2O00167 538 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 SGSM2O43147 1006 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 MMP10P09238 476 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 ERFEQ4G0M1 354 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 PUS3Q9BZE2 481 aaKnown RBP15.76■□□□□ 0.11
SMAD3-207ENST00000558763 NYXQ9GZU5 481 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
SMAD3-207ENST00000558763 ABCC12Q96J65 1359 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms