RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 RPAINQ86UA6 219 aa18.89■□□□□ 0.61
HMBOX1-212ENST00000558662 PI4K2BQ8TCG2 481 aa18.89■□□□□ 0.61
HMBOX1-212ENST00000558662 FAM107BQ9H098 131 aa18.89■□□□□ 0.61
HMBOX1-212ENST00000558662 DEF6Q9H4E7 631 aa18.89■□□□□ 0.61
HMBOX1-212ENST00000558662 JRKLQ9Y4A0 524 aa18.89■□□□□ 0.61
HMBOX1-212ENST00000558662 POTEB2H3BUK9 544 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 HIP1O00291 1037 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 BRD3Q15059 726 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 ME3Q16798 604 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 SWT1Q5T5J6 900 aaKnown RBP18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 CDC37L1Q7L3B6 337 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 RABGGTAQ92696 567 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 JAKMIP1Q96N16 626 aaKnown RBP18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 CPP00450 1065 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 TPRNQ4KMQ1 711 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 DHX40Q8IX18 779 aaKnown RBP18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 ADAM21Q9UKJ8 722 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 USP16Q9Y5T5 823 aa18.88■□□□□ 0.61
HMBOX1-212ENST00000558662 CCDC151A5D8V7 595 aa18.87■□□□□ 0.61
HMBOX1-212ENST00000558662 ZSCAN12O43309 604 aa18.87■□□□□ 0.61
HMBOX1-212ENST00000558662 MYO1BO43795 1136 aa18.87■□□□□ 0.61
HMBOX1-212ENST00000558662 ST5P78524 1137 aa18.87■□□□□ 0.61
HMBOX1-212ENST00000558662 REXO1L1PQ8IX06 675 aa18.87■□□□□ 0.61
HMBOX1-212ENST00000558662 HNRNPLLQ8WVV9 542 aaKnown RBP18.87■□□□□ 0.61
HMBOX1-212ENST00000558662 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■□□□ 13.4
HMBOX1-212ENST00000558662 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 ST3GAL1Q11201 340 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 PGBD1Q96JS3 809 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 IL25Q9H293 177 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 EIF3JO75822 258 aaKnown RBP18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 SMC2O95347 1197 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 TUBBP07437 444 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 ATP2B1P20020 1258 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 PSEN1P49768 467 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 ARID5BQ14865 1188 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 CCDC73Q6ZRK6 1079 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 CCDC91Q7Z6B0 441 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 HOMER1Q86YM7 354 aa18.86■□□□□ 0.61
HMBOX1-212ENST00000558662 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
HMBOX1-212ENST00000558662 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
HMBOX1-212ENST00000558662 C11orf57Q6ZUT1 292 aaPredicted RBP18.85■□□□□ 0.61
HMBOX1-212ENST00000558662 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
HMBOX1-212ENST00000558662 SNRKQ9NRH2 765 aa18.85■□□□□ 0.61
HMBOX1-212ENST00000558662 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
HMBOX1-212ENST00000558662 CRB1P82279 1406 aa18.84■□□□□ 0.61
HMBOX1-212ENST00000558662 KINO60870 393 aaKnown RBP18.84■□□□□ 0.61
HMBOX1-212ENST00000558662 TUBB2AQ13885 445 aa18.84■□□□□ 0.61
HMBOX1-212ENST00000558662 TUBB2BQ9BVA1 445 aa18.84■□□□□ 0.61
HMBOX1-212ENST00000558662 RCOR1Q9UKL0 485 aa18.84■□□□□ 0.61
HMBOX1-212ENST00000558662 CHMP3Q9Y3E7 222 aa18.84■□□□□ 0.61
HMBOX1-212ENST00000558662 MAP2K7O14733 419 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 EVCP57679 992 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 FAM69CQ0P6D2 419 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 POLA2Q14181 598 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 NBPF11Q86T75 865 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 DDX11Q96FC9 970 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 CEP89Q96ST8 783 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 FUT8Q9BYC5 575 aa18.83■□□□□ 0.61
HMBOX1-212ENST00000558662 PNMA6EA0A0J9YXQ4 647 aa18.83■□□□□ 0.6
HMBOX1-212ENST00000558662 NPHP1O15259 732 aa18.83■□□□□ 0.6
HMBOX1-212ENST00000558662 RESTQ13127 1097 aa18.83■□□□□ 0.6
HMBOX1-212ENST00000558662 ZRSR1Q15695 479 aaKnown RBP18.83■□□□□ 0.6
HMBOX1-212ENST00000558662 RSRC2Q7L4I2 434 aaKnown RBP18.83■□□□□ 0.6
HMBOX1-212ENST00000558662 HMG20BQ9P0W2 317 aa18.83■□□□□ 0.6
HMBOX1-212ENST00000558662 TRIM66O15016 1216 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 LMAN1P49257 510 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 CORO7P57737 925 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 FAM160A1Q05DH4 1040 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 TSGA10IPQ3SY00 556 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 SLC4A10Q6U841 1118 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 EFCAB13Q8IY85 973 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 CHMP4CQ96CF2 233 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 ADCY9O60503 1353 aa18.82■□□□□ 0.6
HMBOX1-212ENST00000558662 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 SOX12O15370 315 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 CBFA2T2O43439 604 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 KIF1CO43896 1103 aaKnown RBP18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 TRIM65Q6PJ69 517 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 GPATCH3Q96I76 525 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 TACO1Q9BSH4 297 aaKnown RBP18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 SASH3O75995 380 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 RHPN1Q8TCX5 695 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 GOLGA1Q92805 767 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 LCMT1Q9UIC8 334 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
HMBOX1-212ENST00000558662 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 ERLIN1O75477 346 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 ARMCX5Q6P1M9 558 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 FERMT3Q86UX7 667 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 CERS3Q8IU89 383 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms