RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 AOC2O75106 756 aa19.88■□□□□ 0.77
LINC01220-201ENST00000558575 ZNF34Q8IZ26 560 aa19.88■□□□□ 0.77
LINC01220-201ENST00000558575 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
LINC01220-201ENST00000558575 FZD9O00144 591 aa19.87■□□□□ 0.77
LINC01220-201ENST00000558575 ECE1P42892 770 aa19.87■□□□□ 0.77
LINC01220-201ENST00000558575 SSH1Q8WYL5 1049 aa19.87■□□□□ 0.77
LINC01220-201ENST00000558575 SETDB2Q96T68 719 aa19.87■□□□□ 0.77
LINC01220-201ENST00000558575 NIP7Q9Y221 180 aaKnown RBP eCLIP19.87■□□□□ 0.77
LINC01220-201ENST00000558575 ZNF652Q9Y2D9 606 aa19.87■□□□□ 0.77
LINC01220-201ENST00000558575 CST9Q5W186 159 aa19.86■□□□□ 0.77
LINC01220-201ENST00000558575 MRPL50Q8N5N7 158 aaKnown RBP19.86■□□□□ 0.77
LINC01220-201ENST00000558575 SNED1Q8TER0 1413 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 UBN2Q6ZU65 1347 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 GPTP24298 496 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 ST5P78524 1137 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 FLIIQ13045 1269 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 TCIRG1Q13488 830 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 GPC2Q8N158 579 aa19.85■□□□□ 0.77
LINC01220-201ENST00000558575 TRAF5O00463 557 aa19.84■□□□□ 0.77
LINC01220-201ENST00000558575 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
LINC01220-201ENST00000558575 TLL2Q9Y6L7 1015 aa19.84■□□□□ 0.77
LINC01220-201ENST00000558575 PI4KAP2A4QPH2 592 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 NPHP1O15259 732 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 IARSP41252 1262 aaKnown RBP19.83■□□□□ 0.77
LINC01220-201ENST00000558575 DGKZQ13574 1117 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 SUSD4Q5VX71 490 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 PI4KAP1Q8N8J0 262 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 ZNF428Q96B54 188 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
LINC01220-201ENST00000558575 MAP2K2P36507 400 aa19.82■□□□□ 0.76
LINC01220-201ENST00000558575 BCL2L13Q9BXK5 485 aa19.82■□□□□ 0.76
LINC01220-201ENST00000558575 FAM177BA6PVY3 158 aa19.81■□□□□ 0.76
LINC01220-201ENST00000558575 ATP5J2-PTCD1G3V325 749 aa19.81■□□□□ 0.76
LINC01220-201ENST00000558575 RARSP54136 660 aaKnown RBP19.81■□□□□ 0.76
LINC01220-201ENST00000558575 ALDH1L2Q3SY69 923 aa19.81■□□□□ 0.76
LINC01220-201ENST00000558575 NLRP10Q86W26 655 aa19.81■□□□□ 0.76
LINC01220-201ENST00000558575 YTHDC1Q96MU7 727 aaKnown RBP19.81■□□□□ 0.76
LINC01220-201ENST00000558575 MAP3K2Q9Y2U5 619 aa19.81■□□□□ 0.76
LINC01220-201ENST00000558575 NUP98P52948 1817 aa19.81■□□□□ 0.76
LINC01220-201ENST00000558575 DDX58O95786 925 aaKnown RBP19.8■□□□□ 0.76
LINC01220-201ENST00000558575 NPR1P16066 1061 aa19.8■□□□□ 0.76
LINC01220-201ENST00000558575 HSP90AB3PQ58FF7 597 aa19.8■□□□□ 0.76
LINC01220-201ENST00000558575 SYNE4Q8N205 404 aa19.8■□□□□ 0.76
LINC01220-201ENST00000558575 METTL22Q9BUU2 404 aaPredicted RBP19.8■□□□□ 0.76
LINC01220-201ENST00000558575 EPS15P42566 896 aa19.79■□□□□ 0.76
LINC01220-201ENST00000558575 SCNN1DP51172 638 aa19.79■□□□□ 0.76
LINC01220-201ENST00000558575 TRIM28Q13263 835 aaKnown RBP19.79■□□□□ 0.76
LINC01220-201ENST00000558575 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
LINC01220-201ENST00000558575 NBPF5PQ86XG9 351 aaPredicted RBP19.79■□□□□ 0.76
LINC01220-201ENST00000558575 GJA3Q9Y6H8 435 aa19.79■□□□□ 0.76
LINC01220-201ENST00000558575 AKAP11Q9UKA4 1901 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 KLRG2A4D1S0 409 aaPredicted RBP19.78■□□□□ 0.76
LINC01220-201ENST00000558575 F6X3S4 739 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 NTSR2O95665 410 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 IGKV5-2P06315 115 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 RTKN2Q8IZC4 609 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 MYD88Q99836 296 aa19.78■□□□□ 0.76
LINC01220-201ENST00000558575 CA12O43570 354 aa19.77■□□□□ 0.76
LINC01220-201ENST00000558575 BRPF1P55201 1214 aaPredicted RBP19.77■□□□□ 0.76
LINC01220-201ENST00000558575 NUTM1Q86Y26 1132 aa19.77■□□□□ 0.76
LINC01220-201ENST00000558575 SMC4Q9NTJ3 1288 aa19.77■□□□□ 0.76
LINC01220-201ENST00000558575 BCAR3O75815 825 aa19.76■□□□□ 0.75
LINC01220-201ENST00000558575 LMOD1P29536 600 aaPredicted RBP19.76■□□□□ 0.75
LINC01220-201ENST00000558575 SOX10P56693 466 aa19.76■□□□□ 0.75
LINC01220-201ENST00000558575 SAPCD2Q86UD0 394 aa19.76■□□□□ 0.75
LINC01220-201ENST00000558575 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
LINC01220-201ENST00000558575 POLR2AP24928 1970 aaKnown RBP19.75■□□□□ 0.75
LINC01220-201ENST00000558575 UTP14AQ9BVJ6 771 aaKnown RBP19.75■□□□□ 0.75
LINC01220-201ENST00000558575 CACNA1FO60840 1977 aa19.74■□□□□ 0.75
LINC01220-201ENST00000558575 CIAPIN1Q6FI81 312 aa19.74■□□□□ 0.75
LINC01220-201ENST00000558575 PPP1R42Q7Z4L9 355 aa19.74■□□□□ 0.75
LINC01220-201ENST00000558575 JDP2Q8WYK2 163 aa19.74■□□□□ 0.75
LINC01220-201ENST00000558575 PSMD1Q99460 953 aa19.74■□□□□ 0.75
LINC01220-201ENST00000558575 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
LINC01220-201ENST00000558575 NOB1Q9ULX3 412 aaKnown RBP19.74■□□□□ 0.75
LINC01220-201ENST00000558575 ABCC12Q96J65 1359 aa19.73■□□□□ 0.75
LINC01220-201ENST00000558575 IBTKQ9P2D0 1353 aaPredicted RBP19.73■□□□□ 0.75
LINC01220-201ENST00000558575 EIF6P56537 245 aaKnown RBP19.73■□□□□ 0.75
LINC01220-201ENST00000558575 CWF19L2Q2TBE0 894 aaKnown RBP19.73■□□□□ 0.75
LINC01220-201ENST00000558575 SLC10A5Q5PT55 438 aa19.73■□□□□ 0.75
LINC01220-201ENST00000558575 BEND3Q5T5X7 828 aa19.73■□□□□ 0.75
LINC01220-201ENST00000558575 PRPF38BQ5VTL8 546 aaKnown RBP19.73■□□□□ 0.75
LINC01220-201ENST00000558575 USP50Q70EL3 339 aaPredicted RBP19.73■□□□□ 0.75
LINC01220-201ENST00000558575 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
LINC01220-201ENST00000558575 ZIC5Q96T25 663 aa19.73■□□□□ 0.75
LINC01220-201ENST00000558575 TRMT112Q9UI30 125 aaKnown RBP19.73■□□□□ 0.75
LINC01220-201ENST00000558575 NEURL1BA8MQ27 555 aa19.72■□□□□ 0.75
LINC01220-201ENST00000558575 C3orf67Q6ZVT6 689 aa19.72■□□□□ 0.75
LINC01220-201ENST00000558575 SLC51AQ86UW1 340 aa19.72■□□□□ 0.75
LINC01220-201ENST00000558575 JARID2Q92833 1246 aaPredicted RBP19.72■□□□□ 0.75
LINC01220-201ENST00000558575 FAM89AQ96GI7 184 aa19.72■□□□□ 0.75
LINC01220-201ENST00000558575 CELF2O95319 508 aaKnown RBP19.71■□□□□ 0.75
LINC01220-201ENST00000558575 GTF2E1P29083 439 aaPredicted RBP19.71■□□□□ 0.75
LINC01220-201ENST00000558575 PTPRCP08575 1304 aa19.71■□□□□ 0.75
LINC01220-201ENST00000558575 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
LINC01220-201ENST00000558575 HHIPL1Q96JK4 782 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms