RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TRPA1O75762 1119 aa9.07□□□□□ -0.96
LRRC28-207ENST00000558500 KIF23Q02241 960 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-207ENST00000558500 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
LRRC28-207ENST00000558500 BCL2L13Q9BXK5 485 aa9.07□□□□□ -0.96
LRRC28-207ENST00000558500 CASP8AP2Q9UKL3 1982 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 ERVV-1B6SEH8 477 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 DLK2Q6UY11 383 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 C3orf67Q6ZVT6 689 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 SUPT20HQ8NEM7 779 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 PHACTR3Q96KR7 559 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 RTFDC1Q9BY42 306 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-207ENST00000558500 TMX4Q9H1E5 349 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-207ENST00000558500 ATP6V0A2Q9Y487 856 aa9.06□□□□□ -0.96
LRRC28-207ENST00000558500 IBTKQ9P2D0 1353 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-207ENST00000558500 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-207ENST00000558500 SHTN1A0MZ66 631 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 RAD17O75943 681 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 GPTP24298 496 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 KIAA2012Q0VF49 1180 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 TNIP1Q15025 636 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 GBA2Q9HCG7 927 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-207ENST00000558500 CNOT7Q9UIV1 285 aaKnown RBP9.05□□□□□ -0.96
LRRC28-207ENST00000558500 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
LRRC28-207ENST00000558500 TRPM7Q96QT4 1865 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 H7C1D1 291 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 NTSR2O95665 410 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 ZNF157P51786 506 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-207ENST00000558500 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 DPP8Q6V1X1 898 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-207ENST00000558500 MCM10Q7L590 875 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 MICALL2Q8IY33 904 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 MIER1Q8N108 512 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 NGEFQ8N5V2 710 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 C2orf69Q8N8R5 385 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 GCC1Q96CN9 775 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 CSRNP1Q96S65 589 aa9.04□□□□□ -0.96
LRRC28-207ENST00000558500 FARP1Q9Y4F1 1045 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-207ENST00000558500 SIPA1L3O60292 1781 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-207ENST00000558500 SLC10A3P09131 477 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 PRKAR2BP31323 418 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 CC2D1BQ5T0F9 858 aaKnown RBP9.03□□□□□ -0.96
LRRC28-207ENST00000558500 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 ZNF34Q8IZ26 560 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 RTF1Q92541 710 aaKnown RBP9.03□□□□□ -0.96
LRRC28-207ENST00000558500 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 ABCC4O15439 1325 aa9.03□□□□□ -0.96
LRRC28-207ENST00000558500 YDJCA8MPS7 323 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 ADM5C9JUS6 153 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 PER1O15534 1290 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-207ENST00000558500 BBOX1O75936 387 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 PKN2Q16513 984 aaKnown RBP9.02□□□□□ -0.97
LRRC28-207ENST00000558500 HABP4Q5JVS0 413 aaKnown RBP9.02□□□□□ -0.97
LRRC28-207ENST00000558500 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 SP8Q8IXZ3 490 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 MPNDQ8N594 471 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 DPF2Q92785 391 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 RSPH6AQ9H0K4 717 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
LRRC28-207ENST00000558500 EGFRP00533 1210 aa9.01□□□□□ -0.97
LRRC28-207ENST00000558500 DCTN1Q14203 1278 aa9.01□□□□□ -0.97
LRRC28-207ENST00000558500 TAF7Q15545 349 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-207ENST00000558500 TBC1D10BQ4KMP7 808 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-207ENST00000558500 PARP10Q53GL7 1025 aa9.01□□□□□ -0.97
LRRC28-207ENST00000558500 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
LRRC28-207ENST00000558500 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
LRRC28-207ENST00000558500 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
LRRC28-207ENST00000558500 DCPSQ96C86 337 aaKnown RBP9.01□□□□□ -0.97
LRRC28-207ENST00000558500 HDAC9Q9UKV0 1011 aa9.01□□□□□ -0.97
LRRC28-207ENST00000558500 RRP7AQ9Y3A4 280 aaKnown RBP9.01□□□□□ -0.97
LRRC28-207ENST00000558500 PSMD14O00487 310 aa9□□□□□ -0.97
LRRC28-207ENST00000558500 HTATSF1O43719 755 aaKnown RBP9□□□□□ -0.97
LRRC28-207ENST00000558500 RASAL3Q86YV0 1011 aa9□□□□□ -0.97
LRRC28-207ENST00000558500 MIS18AQ9NYP9 233 aa9□□□□□ -0.97
LRRC28-207ENST00000558500 MYL6BP14649 208 aa8.99□□□□□ -0.97
LRRC28-207ENST00000558500 RPS12P25398 132 aaKnown RBP8.99□□□□□ -0.97
LRRC28-207ENST00000558500 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
LRRC28-207ENST00000558500 ZNF296Q8WUU4 475 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-207ENST00000558500 BBXQ8WY36 941 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-207ENST00000558500 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
LRRC28-207ENST00000558500 HAX1O00165 279 aa8.98□□□□□ -0.97
LRRC28-207ENST00000558500 TBC1D8O95759 1140 aa8.98□□□□□ -0.97
LRRC28-207ENST00000558500 MNX1P50219 401 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-207ENST00000558500 GRAPQ13588 217 aa8.98□□□□□ -0.97
LRRC28-207ENST00000558500 FBXO46Q6PJ61 603 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-207ENST00000558500 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
LRRC28-207ENST00000558500 GRAPLQ8TC17 118 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-207ENST00000558500 CDCA5Q96FF9 252 aa8.98□□□□□ -0.97
LRRC28-207ENST00000558500 GGA3Q9NZ52 723 aa8.98□□□□□ -0.97
LRRC28-207ENST00000558500 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-207ENST00000558500 HCLS1P14317 486 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-207ENST00000558500 EIF4A1P60842 406 aaKnown RBP8.97□□□□□ -0.97
LRRC28-207ENST00000558500 FKBP1BP68106 108 aa8.97□□□□□ -0.97
LRRC28-207ENST00000558500 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms