RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 AKAP17AQ02040 695 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 DNM1Q05193 864 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 SETDB1Q15047 1291 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 HOMER3Q9NSC5 361 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 KIF5BP33176 963 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 SLC30A9Q6PML9 568 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC148Q8NFR7 591 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 ZNF428Q96B54 188 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 RPS6KA3P51812 740 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 IFFO1Q0D2I5 559 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 CTAGE15A4D2H0 777 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 H3BQV1 296 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 RNF40O75150 1001 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 CTAGE8P0CG41 777 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
TRPM1-207ENST00000558445 SLMAPQ14BN4 828 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 PREPLQ4J6C6 727 aaPredicted RBP11.56□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC38Q502W7 563 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 CTAGE6Q86UF2 777 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 CTAGE4Q8IX94 777 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 NFATC2IPQ8NCF5 419 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 KLC4Q9NSK0 619 aa11.56□□□□□ -0.56
TRPM1-207ENST00000558445 E2F5Q15329 346 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 LARP1BQ659C4 914 aaKnown RBP11.55□□□□□ -0.56
TRPM1-207ENST00000558445 MCM8Q9UJA3 840 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 SERPINC1P01008 464 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 ZBTB40Q9NUA8 1239 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 TPD52L2O43399 206 aaKnown RBP11.55□□□□□ -0.56
TRPM1-207ENST00000558445 SYT1P21579 422 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 ACTN3Q08043 901 aaPredicted RBP11.55□□□□□ -0.56
TRPM1-207ENST00000558445 ZC3H12AQ5D1E8 599 aaKnown RBP11.55□□□□□ -0.56
TRPM1-207ENST00000558445 TUBB2AQ13885 445 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC40Q4G0X9 1142 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 RCSD1Q6JBY9 416 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 TBC1D31Q96DN5 1066 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 TUBB2BQ9BVA1 445 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 FUT8Q9BYC5 575 aa11.55□□□□□ -0.56
TRPM1-207ENST00000558445 OPA1O60313 960 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 SLC8A3P57103 927 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 LAMB3Q13751 1172 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CAPS2Q9BXY5 557 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CD248Q9HCU0 757 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CUL4AQ13619 759 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC144BQ3MJ40 725 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC144CPQ8IYA2 1237 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
TRPM1-207ENST00000558445 TSC22D3Q99576 134 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 KDM4CQ9H3R0 1056 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 G3BP2Q9UN86 482 aaKnown RBP11.54□□□□□ -0.56
TRPM1-207ENST00000558445 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRPM1-207ENST00000558445 SMIM24O75264 130 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 CCNHP51946 323 aaPredicted RBP11.54□□□□□ -0.56
TRPM1-207ENST00000558445 MFSD4BQ5TF39 518 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 YIPF3Q9GZM5 350 aa11.54□□□□□ -0.56
TRPM1-207ENST00000558445 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 RHOXF2BP0C7M4 288 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 CHGAP10645 457 aaKnown RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 RINLQ6ZS11 566 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 WDR66Q8TBY9 1149 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC47Q96A33 483 aaKnown RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 RHOXF2Q9BQY4 288 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 PIP4K2BP78356 416 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 DDR1Q08345 913 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 SMARCC2Q8TAQ2 1214 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 FAXDC2Q96IV6 333 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 CLSTN2Q9H4D0 955 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 PUF60Q9UHX1 559 aaKnown RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 LUC7L3O95232 432 aaKnown RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
TRPM1-207ENST00000558445 GNGT1P63211 74 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 PPFIA1Q13136 1202 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 TAX1BP1Q86VP1 789 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
TRPM1-207ENST00000558445 EXOC5O00471 708 aa11.52□□□□□ -0.56
TRPM1-207ENST00000558445 RABEP2Q9H5N1 569 aa11.52□□□□□ -0.56
TRPM1-207ENST00000558445 EVC2Q86UK5 1308 aa11.52□□□□□ -0.56
TRPM1-207ENST00000558445 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 H3BQF6 201 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms