RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLFN5Q08AF3 891 aa15.96■□□□□ 0.15
SPG11-210ENST00000558319 C8orf37Q96NL8 207 aa15.96■□□□□ 0.15
SPG11-210ENST00000558319 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.15
SPG11-210ENST00000558319 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.14
SPG11-210ENST00000558319 CCDC155Q8N6L0 562 aa15.96■□□□□ 0.14
SPG11-210ENST00000558319 SH2B1Q9NRF2 756 aaPredicted RBP15.96■□□□□ 0.14
SPG11-210ENST00000558319 C9orf84Q5VXU9 1444 aa15.96■□□□□ 0.14
SPG11-210ENST00000558319 GTF3C6Q969F1 213 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 FERP16591 822 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 HEATR3Q7Z4Q2 680 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 MAP3K9P80192 1104 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 RPAP2Q8IXW5 612 aaPredicted RBP15.95■□□□□ 0.14
SPG11-210ENST00000558319 GTPBP4Q9BZE4 634 aaKnown RBP15.95■□□□□ 0.14
SPG11-210ENST00000558319 CEP83Q9Y592 693 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 GOLGA6L9A6NEM1 432 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 KRBA2Q6ZNG9 492 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 ZNF287Q9HBT7 754 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 CNPY2Q9Y2B0 182 aa15.95■□□□□ 0.14
SPG11-210ENST00000558319 CTAGE15A4D2H0 777 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CTAGE8P0CG41 777 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CTAGE6Q86UF2 777 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CTAGE4Q8IX94 777 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 SYNCQ9H7C4 482 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CALM1P0DP23 149 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CALM2P0DP24 149 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CALM3P0DP25 149 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 GPIHBP1Q8IV16 184 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 KIAA0753Q2KHM9 967 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 IKBKGQ9Y6K9 419 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 NSRP1Q9H0G5 558 aaKnown RBP15.94■□□□□ 0.14
SPG11-210ENST00000558319 DTNBO60941 627 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 UBE2HP62256 183 aa15.94■□□□□ 0.14
SPG11-210ENST00000558319 CKAP4Q07065 602 aaKnown RBP15.94■□□□□ 0.14
SPG11-210ENST00000558319 UVSSAQ2YD98 709 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 RHOXF2BP0C7M4 288 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 PDIA4P13667 645 aaKnown RBP15.93■□□□□ 0.14
SPG11-210ENST00000558319 RXRAP19793 462 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 RHOXF2Q9BQY4 288 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 AMOTL2Q9Y2J4 779 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 PLEKHH1Q9ULM0 1364 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 GLRX3O76003 335 aaKnown RBP15.93■□□□□ 0.14
SPG11-210ENST00000558319 TMCO4Q5TGY1 634 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 GBP6Q6ZN66 633 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 TBC1D9Q6ZT07 1266 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 CCDC114Q96M63 670 aa15.93■□□□□ 0.14
SPG11-210ENST00000558319 WDHD1O75717 1129 aaPredicted RBP15.93■□□□□ 0.14
SPG11-210ENST00000558319 HELBQ8NG08 1087 aaPredicted RBP15.93■□□□□ 0.14
SPG11-210ENST00000558319 N4BP3O15049 544 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 FCHSD2O94868 740 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 NBPF6Q5VWK0 638 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 NBPF5PQ86XG9 351 aaPredicted RBP15.92■□□□□ 0.14
SPG11-210ENST00000558319 NBPF4Q96M43 638 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 KARSQ15046 597 aaKnown RBP15.92■□□□□ 0.14
SPG11-210ENST00000558319 ANKS4BQ8N8V4 417 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 CALML4Q96GE6 196 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 KLHL40Q2TBA0 621 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 ZNF408Q9H9D4 720 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 MRVI1Q9Y6F6 885 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 TSPY3P0CV98 308 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 TSPY8P0CW00 308 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
SPG11-210ENST00000558319 METAP2P50579 478 aaKnown RBP eCLIP15.92■□□□□ 0.14
SPG11-210ENST00000558319 KIF21BO75037 1637 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 SMARCA4P51532 1647 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 ARID4AP29374 1257 aaPredicted RBP15.91■□□□□ 0.14
SPG11-210ENST00000558319 MARCKSP29966 332 aaPredicted RBP15.91■□□□□ 0.14
SPG11-210ENST00000558319 EBAG9O00559 213 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 ZBTB16Q05516 673 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 PSMC4P43686 418 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 MFSD6Q6ZSS7 791 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 CABP5Q9NP86 173 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 SEPT6Q14141 434 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 AOPEPQ8N6M6 819 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 RABEP2Q9H5N1 569 aa15.91■□□□□ 0.14
SPG11-210ENST00000558319 MIGA1Q8NAN2 632 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 SLU7O95391 586 aaKnown RBP15.9■□□□□ 0.14
SPG11-210ENST00000558319 KRT13P13646 458 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 USP48Q86UV5 1035 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 OPA1O60313 960 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 TSNARE1Q96NA8 513 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 DNAJC25Q9H1X3 360 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 RASSF4Q9H2L5 321 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 AKR1B10O60218 316 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 CFAP58Q5T655 872 aa15.9■□□□□ 0.14
SPG11-210ENST00000558319 PRKG1Q13976 671 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 NBPF11Q86T75 865 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 CCDC63Q8NA47 563 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 TRIM47Q96LD4 638 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 PHAXQ9H814 394 aaKnown RBP15.89■□□□□ 0.13
SPG11-210ENST00000558319 IFT81Q8WYA0 676 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 CYP7A1P22680 504 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 CPLX4Q7Z7G2 160 aa15.89■□□□□ 0.13
SPG11-210ENST00000558319 SLC4A4Q9Y6R1 1079 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms