RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ARID5BQ14865 1188 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 SULT6B1Q6IMI4 303 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 NME9Q86XW9 330 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 SPATA32Q96LK8 384 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 STK31Q9BXU1 1019 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 BECN2A8MW95 431 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 HTATSF1O43719 755 aaKnown RBP5.97□□□□□ -1.45
HMG20A-204ENST00000558288 CCDC144BQ3MJ40 725 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 GORABQ5T7V8 394 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 CCDC171Q6TFL3 1326 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 POLR3GO15318 223 aaPredicted RBP5.97□□□□□ -1.45
HMG20A-204ENST00000558288 SURF6O75683 361 aaKnown RBP5.97□□□□□ -1.45
HMG20A-204ENST00000558288 PRPF40BQ6NWY9 871 aaKnown RBP5.97□□□□□ -1.45
HMG20A-204ENST00000558288 ERO1AQ96HE7 468 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 TSPYL4Q9UJ04 414 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 LRRFIP2Q9Y608 721 aaKnown RBP5.97□□□□□ -1.45
HMG20A-204ENST00000558288 CYP46A1Q9Y6A2 500 aa5.97□□□□□ -1.45
HMG20A-204ENST00000558288 SPATA31A1Q5TZJ5 1347 aa5.96□□□□□ -1.45
HMG20A-204ENST00000558288 SLU7O95391 586 aaKnown RBP5.96□□□□□ -1.45
HMG20A-204ENST00000558288 GNAI3P08754 354 aa5.96□□□□□ -1.45
HMG20A-204ENST00000558288 OS9Q13438 667 aaPredicted RBP5.96□□□□□ -1.45
HMG20A-204ENST00000558288 CDC37L1Q7L3B6 337 aa5.96□□□□□ -1.45
HMG20A-204ENST00000558288 CNTROBQ8N137 903 aa5.96□□□□□ -1.45
HMG20A-204ENST00000558288 COG3Q96JB2 828 aa5.96□□□□□ -1.45
HMG20A-204ENST00000558288 TTC14Q96N46 770 aa5.96□□□□□ -1.45
HMG20A-204ENST00000558288 XRN1Q8IZH2 1706 aaKnown RBP5.96□□□□□ -1.45
HMG20A-204ENST00000558288 TECPR2O15040 1411 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 NRXN3Q9Y4C0 1643 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 SGSM2O43147 1006 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 AMPHP49418 695 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 KCNQ4P56696 695 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 CEBPZQ03701 1054 aaKnown RBP5.96□□□□□ -1.46
HMG20A-204ENST00000558288 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.46
HMG20A-204ENST00000558288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-204ENST00000558288 PLA2G4DQ86XP0 818 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 LRRC8AQ8IWT6 810 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 ZNF526Q8TF50 670 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-204ENST00000558288 SBNO1A3KN83 1393 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 PXDNQ92626 1479 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 ARHGEF28Q8N1W1 1705 aaKnown RBP5.96□□□□□ -1.46
HMG20A-204ENST00000558288 PPLO60437 1756 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 CCDC69A6NI79 296 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 STK3Q13188 491 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 DDX19AQ9NUU7 478 aaKnown RBP5.96□□□□□ -1.46
HMG20A-204ENST00000558288 HYPKQ9NX55 129 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 USP16Q9Y5T5 823 aa5.96□□□□□ -1.46
HMG20A-204ENST00000558288 CHL1O00533 1208 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 HNRNPH2P55795 449 aaKnown RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 ATP8B2P98198 1209 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 ERCC6LQ2NKX8 1250 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 TEX35Q5T0J7 233 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 CERS3Q8IU89 383 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 ZSCAN31Q96LW9 406 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 SH2B1Q9NRF2 756 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 SALL3Q9BXA9 1300 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 NR1I2O75469 434 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 UBTFL1P0CB47 393 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 ZKSCAN1P17029 563 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 ME3Q16798 604 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 ADCK5Q3MIX3 580 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 TDRD7Q8NHU6 1098 aaKnown RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 TCEANC2Q96MN5 208 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 SCAND2PQ9GZW5 306 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 LSG1Q9H089 658 aaKnown RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 TFCP2L1Q9NZI6 479 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 CD163L1Q9NR16 1453 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 NHSL1Q5SYE7 1610 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 KCNQ2O43526 872 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 CAPN2P17655 700 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 SNW1Q13573 536 aaKnown RBP5.95□□□□□ -1.46
HMG20A-204ENST00000558288 HOMER1Q86YM7 354 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 NEK11Q8NG66 645 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 CLSTN2Q9H4D0 955 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 STAP2Q9UGK3 403 aa5.95□□□□□ -1.46
HMG20A-204ENST00000558288 NEMFO60524 1076 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 PDCP20941 246 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 FOSBP53539 338 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 RUFY2Q8WXA3 655 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 A0A087WWV3 80 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 RAB11FIP3O75154 756 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 ARHGAP29Q52LW3 1261 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 VPS53Q5VIR6 699 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 RNF20Q5VTR2 975 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 SYT10Q6XYQ8 523 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 PTF1AQ7RTS3 328 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 SIRT1Q96EB6 747 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 PDGFDQ9GZP0 370 aaPredicted RBP5.94□□□□□ -1.46
HMG20A-204ENST00000558288 TSPYL1Q9H0U9 437 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 ARGLU1Q9NWB6 273 aaPredicted RBP5.94□□□□□ -1.46
HMG20A-204ENST00000558288 ZNF446Q9NWS9 450 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 SLIT2O94813 1529 aa5.94□□□□□ -1.46
HMG20A-204ENST00000558288 CPSF1Q10570 1443 aaKnown RBP5.94□□□□□ -1.46
HMG20A-204ENST00000558288 H3BQV1 296 aa5.93□□□□□ -1.46
HMG20A-204ENST00000558288 PTH1RQ03431 593 aa5.93□□□□□ -1.46
HMG20A-204ENST00000558288 FLIIQ13045 1269 aa5.93□□□□□ -1.46
HMG20A-204ENST00000558288 ZRSR1Q15695 479 aaKnown RBP5.93□□□□□ -1.46
HMG20A-204ENST00000558288 IFFO2Q5TF58 517 aa5.93□□□□□ -1.46
HMG20A-204ENST00000558288 TMCO3Q6UWJ1 677 aa5.93□□□□□ -1.46
HMG20A-204ENST00000558288 CCAR2Q8N163 923 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms