RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DDR1Q08345 913 aa20.9■□□□□ 0.94
SNX1-203ENST00000558040 IFIT5Q13325 482 aaKnown RBP20.9■□□□□ 0.94
SNX1-203ENST00000558040 COPRSQ9NQ92 184 aa20.9■□□□□ 0.94
SNX1-203ENST00000558040 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
SNX1-203ENST00000558040 PARP3Q9Y6F1 533 aa20.9■□□□□ 0.94
SNX1-203ENST00000558040 RFX5P48382 616 aaPredicted RBP20.89■□□□□ 0.93
SNX1-203ENST00000558040 NUCB1Q02818 461 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 OS9Q13438 667 aaPredicted RBP20.89■□□□□ 0.93
SNX1-203ENST00000558040 FAM161AQ3B820 660 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 ANKRD45Q5TZF3 282 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 PRR5LQ6MZQ0 368 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 ERC1Q8IUD2 1116 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 NLRP3Q96P20 1036 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
SNX1-203ENST00000558040 RTL9Q8NET4 1388 aa20.88■□□□□ 0.93
SNX1-203ENST00000558040 ANKRD18BA2A2Z9 1011 aa20.88■□□□□ 0.93
SNX1-203ENST00000558040 MMP10P09238 476 aa20.88■□□□□ 0.93
SNX1-203ENST00000558040 G3BP1Q13283 466 aaKnown RBP eCLIP20.88■□□□□ 0.93
SNX1-203ENST00000558040 TAF7LQ5H9L4 462 aa20.88■□□□□ 0.93
SNX1-203ENST00000558040 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
SNX1-203ENST00000558040 ITGA6P23229 1130 aa20.87■□□□□ 0.93
SNX1-203ENST00000558040 PTPN12Q05209 780 aaKnown RBP20.87■□□□□ 0.93
SNX1-203ENST00000558040 SF3B3Q15393 1217 aaKnown RBP20.87■□□□□ 0.93
SNX1-203ENST00000558040 ILDR2Q71H61 639 aa20.87■□□□□ 0.93
SNX1-203ENST00000558040 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
SNX1-203ENST00000558040 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
SNX1-203ENST00000558040 LRRCC1Q9C099 1032 aa20.87■□□□□ 0.93
SNX1-203ENST00000558040 GREM2Q9H772 168 aa20.87■□□□□ 0.93
SNX1-203ENST00000558040 PA2G4Q9UQ80 394 aaKnown RBP20.87■□□□□ 0.93
SNX1-203ENST00000558040 APBB1O00213 710 aa20.86■□□□□ 0.93
SNX1-203ENST00000558040 KIF1BPQ96EK5 621 aa20.86■□□□□ 0.93
SNX1-203ENST00000558040 FBXO3Q9UK99 471 aa20.86■□□□□ 0.93
SNX1-203ENST00000558040 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
SNX1-203ENST00000558040 SIL1Q9H173 461 aa20.85■□□□□ 0.93
SNX1-203ENST00000558040 CIAO1O76071 339 aa20.84■□□□□ 0.93
SNX1-203ENST00000558040 KLHDC4Q8TBB5 520 aa20.84■□□□□ 0.93
SNX1-203ENST00000558040 LNPKQ9C0E8 428 aa20.84■□□□□ 0.93
SNX1-203ENST00000558040 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
SNX1-203ENST00000558040 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.93
SNX1-203ENST00000558040 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
SNX1-203ENST00000558040 CDC5LQ99459 802 aaKnown RBP20.83■□□□□ 0.93
SNX1-203ENST00000558040 EYA2O00167 538 aa20.82■□□□□ 0.92
SNX1-203ENST00000558040 IL15P40933 162 aaPredicted RBP20.82■□□□□ 0.92
SNX1-203ENST00000558040 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
SNX1-203ENST00000558040 TNRC6CQ9HCJ0 1690 aaKnown RBP20.81■□□□□ 0.92
SNX1-203ENST00000558040 IGHMBP2P38935 993 aaKnown RBP20.81■□□□□ 0.92
SNX1-203ENST00000558040 R3HDM1Q15032 1099 aaKnown RBP20.81■□□□□ 0.92
SNX1-203ENST00000558040 C3orf67Q6ZVT6 689 aa20.81■□□□□ 0.92
SNX1-203ENST00000558040 ZNF594Q96JF6 807 aaPredicted RBP20.81■□□□□ 0.92
SNX1-203ENST00000558040 BRIP1Q9BX63 1249 aa20.81■□□□□ 0.92
SNX1-203ENST00000558040 CASZ1Q86V15 1759 aa20.81■□□□□ 0.92
SNX1-203ENST00000558040 LRP5O75197 1615 aa20.8■□□□□ 0.92
SNX1-203ENST00000558040 LDHAL6AQ6ZMR3 332 aa20.8■□□□□ 0.92
SNX1-203ENST00000558040 DDX46Q7L014 1031 aaKnown RBP20.8■□□□□ 0.92
SNX1-203ENST00000558040 MPHOSPH8Q99549 860 aa20.8■□□□□ 0.92
SNX1-203ENST00000558040 SMARCA5O60264 1052 aaPredicted RBP20.79■□□□□ 0.92
SNX1-203ENST00000558040 PDE6BP35913 854 aa20.79■□□□□ 0.92
SNX1-203ENST00000558040 ANKRD18AQ8IVF6 992 aa20.79■□□□□ 0.92
SNX1-203ENST00000558040 CLASRPQ8N2M8 674 aaKnown RBP20.79■□□□□ 0.92
SNX1-203ENST00000558040 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
SNX1-203ENST00000558040 MTFR1LQ9H019 292 aa20.79■□□□□ 0.92
SNX1-203ENST00000558040 SEC31BQ9NQW1 1179 aa20.79■□□□□ 0.92
SNX1-203ENST00000558040 CNNM1Q9NRU3 951 aa20.79■□□□□ 0.92
SNX1-203ENST00000558040 SASH1O94885 1247 aa20.78■□□□□ 0.92
SNX1-203ENST00000558040 RGS3P49796 1198 aa20.78■□□□□ 0.92
SNX1-203ENST00000558040 CRY2Q49AN0 593 aa20.78■□□□□ 0.92
SNX1-203ENST00000558040 ATG9AQ7Z3C6 839 aa20.78■□□□□ 0.92
SNX1-203ENST00000558040 KLRG2A4D1S0 409 aaPredicted RBP20.77■□□□□ 0.92
SNX1-203ENST00000558040 LRRC24Q50LG9 513 aa20.77■□□□□ 0.92
SNX1-203ENST00000558040 BCL11AQ9H165 835 aa20.77■□□□□ 0.92
SNX1-203ENST00000558040 IL1RAPL2Q9NP60 686 aa20.77■□□□□ 0.92
SNX1-203ENST00000558040 PDE4AP27815 886 aa20.76■□□□□ 0.91
SNX1-203ENST00000558040 POLD1P28340 1107 aa20.76■□□□□ 0.91
SNX1-203ENST00000558040 RBM17Q96I25 401 aaKnown RBP20.76■□□□□ 0.91
SNX1-203ENST00000558040 PUS3Q9BZE2 481 aaKnown RBP20.76■□□□□ 0.91
SNX1-203ENST00000558040 CEP126Q9P2H0 1117 aa20.76■□□□□ 0.91
SNX1-203ENST00000558040 MROH5Q6ZUA9 1318 aa20.76■□□□□ 0.91
SNX1-203ENST00000558040 ZBTB7AO95365 584 aa20.75■□□□□ 0.91
SNX1-203ENST00000558040 TFCP2Q12800 502 aa20.75■□□□□ 0.91
SNX1-203ENST00000558040 SKAP1Q86WV1 359 aa20.75■□□□□ 0.91
SNX1-203ENST00000558040 RIPOR2Q9Y4F9 1068 aa20.75■□□□□ 0.91
SNX1-203ENST00000558040 ANKRD31Q8N7Z5 1873 aa20.75■□□□□ 0.91
SNX1-203ENST00000558040 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
SNX1-203ENST00000558040 GRAPQ13588 217 aa20.74■□□□□ 0.91
SNX1-203ENST00000558040 METTL24Q5JXM2 366 aa20.74■□□□□ 0.91
SNX1-203ENST00000558040 GRAPLQ8TC17 118 aaPredicted RBP20.74■□□□□ 0.91
SNX1-203ENST00000558040 GPR108Q9NPR9 543 aa20.74■□□□□ 0.91
SNX1-203ENST00000558040 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
SNX1-203ENST00000558040 PSDA5PKW4 1024 aaPredicted RBP20.73■□□□□ 0.91
SNX1-203ENST00000558040 IFIT2P09913 472 aaKnown RBP20.73■□□□□ 0.91
SNX1-203ENST00000558040 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
SNX1-203ENST00000558040 AACSQ86V21 672 aa20.73■□□□□ 0.91
SNX1-203ENST00000558040 AKAP2Q9Y2D5 859 aa20.73■□□□□ 0.91
SNX1-203ENST00000558040 SPEF2Q9C093 1822 aa20.72■□□□□ 0.91
SNX1-203ENST00000558040 NPR1P16066 1061 aa20.72■□□□□ 0.91
SNX1-203ENST00000558040 TNNI3KQ59H18 835 aa20.72■□□□□ 0.91
SNX1-203ENST00000558040 C16orf71Q8IYS4 520 aaPredicted RBP20.72■□□□□ 0.91
SNX1-203ENST00000558040 CELF1Q92879 486 aaKnown RBP20.72■□□□□ 0.91
SNX1-203ENST00000558040 GPATCH3Q96I76 525 aa20.72■□□□□ 0.91
SNX1-203ENST00000558040 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms