RNA–Protein interactions for RNA: ENST00000558032.5

LRRC49-206, Transcript of leucine rich repeat containing 49, human

TSL 4

Gene LRRC49, Length 546 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-206	ENST00000558032	ZC3H15	Q8WU90	426 aa	Known RBP	10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	CFAP53	Q96M91	514 aa		10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	NLRP3	Q96P20	1036 aa		10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	ZIC5	Q96T25	663 aa		10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	PCGF6	Q9BYE7	350 aa		10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	VPS33B	Q9H267	617 aa		10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	ZBTB3	Q9H5J0	574 aa		10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	RRP7A	Q9Y3A4	280 aa	Known RBP	10.85	□□□□□ -0.67
LRRC49-206	ENST00000558032	KIF7	Q2M1P5	1343 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	MAP3K15	Q6ZN16	1313 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	ERVV-1	B6SEH8	477 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032		H7C1D1	291 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	MYL6B	P14649	208 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	DCTN1	Q14203	1278 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	PRPF38B	Q5VTL8	546 aa	Known RBP	10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	SUSD4	Q5VX71	490 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	DPP8	Q6V1X1	898 aa	Predicted RBP	10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	PPP1R42	Q7Z4L9	355 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	TRPM4	Q8TD43	1214 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	RSPH6A	Q9H0K4	717 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	NUDC	Q9Y266	331 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	COL3A1	P02461	1466 aa	Predicted RBP	10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	RIC1	Q4ADV7	1423 aa		10.84	□□□□□ -0.67
LRRC49-206	ENST00000558032	TRPA1	O75762	1119 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	HIRA	P54198	1017 aa	Predicted RBP	10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	RGMB	Q6NW40	437 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	TTLL7	Q6ZT98	887 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	C2orf69	Q8N8R5	385 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	MIS18A	Q9NYP9	233 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	PGAP2	Q9UHJ9	254 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	CNOT7	Q9UIV1	285 aa	Known RBP	10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	ATP6V0A2	Q9Y487	856 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	UBN2	Q6ZU65	1347 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	CDHR2	Q9BYE9	1310 aa		10.83	□□□□□ -0.68
LRRC49-206	ENST00000558032	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	ZNF157	P51786	506 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	KIF23	Q02241	960 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	TRIM26	Q12899	539 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	TAF7	Q15545	349 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	C3orf67	Q6ZVT6	689 aa		10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	MICALL2	Q8IY33	904 aa		10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	MPND	Q8N594	471 aa		10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	CCDC102A	Q96A19	550 aa		10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	GBA2	Q9HCG7	927 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	SAGE1	Q9NXZ1	904 aa		10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	TNRC18	O15417	2968 aa	Predicted RBP	10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	ABCC4	O15439	1325 aa		10.82	□□□□□ -0.68
LRRC49-206	ENST00000558032	NUP98	P52948	1817 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	SHTN1	A0MZ66	631 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	PER1	O15534	1290 aa	Predicted RBP	10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	NTSR2	O95665	410 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	DLK2	Q6UY11	383 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	KRT26	Q7Z3Y9	468 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	DCPS	Q96C86	337 aa	Known RBP	10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	RNF186	Q9NXI6	227 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	CLSPN	Q9HAW4	1339 aa		10.81	□□□□□ -0.68
LRRC49-206	ENST00000558032	LAMB4	A4D0S4	1761 aa		10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	KIAA2012	Q0VF49	1180 aa		10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	PARP10	Q53GL7	1025 aa		10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	RBM26	Q5T8P6	1007 aa	Known RBP	10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	SAMD7	Q7Z3H4	446 aa		10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	CTU1	Q7Z7A3	348 aa	Known RBP	10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	ZNF34	Q8IZ26	560 aa		10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	UTP14A	Q9BVJ6	771 aa	Known RBP	10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.8	□□□□□ -0.68
LRRC49-206	ENST00000558032	FAM155A	B1AL88	458 aa	Predicted RBP	10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	HTATSF1	O43719	755 aa	Known RBP	10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	BBOX1	O75936	387 aa		10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	NEFM	P07197	916 aa		10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	DDX46	Q7L014	1031 aa	Known RBP	10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	SP8	Q8IXZ3	490 aa		10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	PNISR	Q8TF01	805 aa	Known RBP	10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	HDAC9	Q9UKV0	1011 aa		10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	PDE4DIP	Q5VU43	2346 aa		10.79	□□□□□ -0.68
LRRC49-206	ENST00000558032	ADM5	C9JUS6	153 aa		10.78	□□□□□ -0.68
LRRC49-206	ENST00000558032	YDJC	A8MPS7	323 aa		10.77	□□□□□ -0.69
LRRC49-206	ENST00000558032	PSMD14	O00487	310 aa		10.77	□□□□□ -0.69
LRRC49-206	ENST00000558032	SULF1	Q8IWU6	871 aa		10.77	□□□□□ -0.69
LRRC49-206	ENST00000558032	CSRNP1	Q96S65	589 aa		10.77	□□□□□ -0.69
LRRC49-206	ENST00000558032	HPS5	Q9UPZ3	1129 aa		10.77	□□□□□ -0.69
LRRC49-206	ENST00000558032	AKAP11	Q9UKA4	1901 aa		10.77	□□□□□ -0.69
LRRC49-206	ENST00000558032	RIMBP2	O15034	1052 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	SLC10A3	P09131	477 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	HCLS1	P14317	486 aa	Predicted RBP	10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	EIF4A1	P60842	406 aa	Known RBP	10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	GRAP	Q13588	217 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	WASHC4	Q2M389	1173 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	SLC10A5	Q5PT55	438 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	GRAPL	Q8TC17	118 aa	Predicted RBP	10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	DPF2	Q92785	391 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	GCC1	Q96CN9	775 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	THUMPD2	Q9BTF0	503 aa	Known RBP	10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	DBNDD1	Q9H9R9	158 aa		10.76	□□□□□ -0.69
LRRC49-206	ENST00000558032	C6orf229	H3BNL8	230 aa		10.75	□□□□□ -0.69
LRRC49-206	ENST00000558032	EGFR	P00533	1210 aa		10.75	□□□□□ -0.69
LRRC49-206	ENST00000558032	EIF2S2	P20042	333 aa	Known RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms