RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 CBLBQ13191 982 aa9.79□□□□□ -0.84
ZEB1-210ENST00000557827 HIF1AQ16665 826 aa9.79□□□□□ -0.84
ZEB1-210ENST00000557827 PDE12Q6L8Q7 609 aaKnown RBP9.79□□□□□ -0.84
ZEB1-210ENST00000557827 RHPN1Q8TCX5 695 aa9.79□□□□□ -0.84
ZEB1-210ENST00000557827 RHBDD1Q8TEB9 315 aa9.79□□□□□ -0.84
ZEB1-210ENST00000557827 RNPC3Q96LT9 517 aaKnown RBP9.79□□□□□ -0.84
ZEB1-210ENST00000557827 USP20Q9Y2K6 914 aa9.79□□□□□ -0.84
ZEB1-210ENST00000557827 GADD45BO75293 160 aaPredicted RBP9.78□□□□□ -0.84
ZEB1-210ENST00000557827 IDH3AP50213 366 aa9.78□□□□□ -0.84
ZEB1-210ENST00000557827 ANKS3Q6ZW76 656 aa9.78□□□□□ -0.84
ZEB1-210ENST00000557827 SUSD3Q96L08 255 aa9.78□□□□□ -0.84
ZEB1-210ENST00000557827 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
ZEB1-210ENST00000557827 ELP3Q9H9T3 547 aa9.78□□□□□ -0.84
ZEB1-210ENST00000557827 EFR3BQ9Y2G0 817 aa9.78□□□□□ -0.84
ZEB1-210ENST00000557827 MRVI1Q9Y6F6 885 aa9.78□□□□□ -0.84
ZEB1-210ENST00000557827 FILIP1Q7Z7B0 1213 aa9.77□□□□□ -0.85
ZEB1-210ENST00000557827 RELL1Q8IUW5 271 aa9.77□□□□□ -0.85
ZEB1-210ENST00000557827 ZNF280CQ8ND82 737 aa9.77□□□□□ -0.85
ZEB1-210ENST00000557827 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
ZEB1-210ENST00000557827 COL4A3BPQ9Y5P4 624 aa9.77□□□□□ -0.85
ZEB1-210ENST00000557827 MINDY4BA8MYZ0 360 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 KLF4O43474 513 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 GTF2E1P29083 439 aaPredicted RBP9.76□□□□□ -0.85
ZEB1-210ENST00000557827 PWP1Q13610 501 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 IER5Q5VY09 327 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 GALNT12Q8IXK2 581 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
ZEB1-210ENST00000557827 KLRG1Q96E93 195 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 TRIM55Q9BYV6 548 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 GINM1Q9NU53 330 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
ZEB1-210ENST00000557827 TTF2Q9UNY4 1162 aaKnown RBP9.76□□□□□ -0.85
ZEB1-210ENST00000557827 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
ZEB1-210ENST00000557827 GSTT1P30711 240 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 INPP5BP32019 993 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 EIF4A3P38919 411 aaKnown RBP9.75□□□□□ -0.85
ZEB1-210ENST00000557827 RAB33AQ14088 237 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 GRM2Q14416 872 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 TRIP4Q15650 581 aaPredicted RBP9.75□□□□□ -0.85
ZEB1-210ENST00000557827 Q6ZVU0 165 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 EAF1Q96JC9 268 aaPredicted RBP9.75□□□□□ -0.85
ZEB1-210ENST00000557827 AGBL1Q96MI9 1066 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 SUV39H2Q9H5I1 410 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 KCNMB2Q9Y691 235 aa9.75□□□□□ -0.85
ZEB1-210ENST00000557827 F6X3S4 739 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 GBP2P32456 591 aaPredicted RBP9.74□□□□□ -0.85
ZEB1-210ENST00000557827 PLA2G4AP47712 749 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 ARSDP51689 593 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 AIDAQ96BJ3 306 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 KLHL42Q9P2K6 505 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 STRIP2Q9ULQ0 834 aa9.74□□□□□ -0.85
ZEB1-210ENST00000557827 EREGO14944 169 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 U2SURPO15042 1029 aaKnown RBP9.73□□□□□ -0.85
ZEB1-210ENST00000557827 SOX9P48436 509 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 KCNC4Q03721 635 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 GNASQ5JWF2 1037 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 ZNF296Q8WUU4 475 aaPredicted RBP9.73□□□□□ -0.85
ZEB1-210ENST00000557827 HSH2DQ96JZ2 352 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 TMEM74Q96NL1 305 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 TRIM56Q9BRZ2 755 aaKnown RBP9.73□□□□□ -0.85
ZEB1-210ENST00000557827 CHRDQ9H2X0 955 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 PPP4R2Q9NY27 417 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 SNTG2Q9NY99 539 aa9.73□□□□□ -0.85
ZEB1-210ENST00000557827 RELBQ01201 579 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 CCDC85BQ15834 202 aaPredicted RBP9.72□□□□□ -0.85
ZEB1-210ENST00000557827 C4orf17Q53FE4 359 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 PLEKHG4Q58EX7 1191 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
ZEB1-210ENST00000557827 C1orf127Q8N9H9 656 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 DEPDC7Q96QD5 511 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 GRIP2Q9C0E4 1043 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
ZEB1-210ENST00000557827 SPC25Q9HBM1 224 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 ZDHHC3Q9NYG2 299 aa9.72□□□□□ -0.85
ZEB1-210ENST00000557827 FAM221BA6H8Z2 402 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 DNAJC6O75061 913 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 NNTQ13423 1086 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 CERS3Q8IU89 383 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 C3orf58Q8NDZ4 430 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 HNRNPLLQ8WVV9 542 aaKnown RBP9.71□□□□□ -0.86
ZEB1-210ENST00000557827 MRGPRX2Q96LB1 330 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 NT5C1AQ9BXI3 368 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 CNTN3Q9P232 1028 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 ANKIB1Q9P2G1 1089 aa9.71□□□□□ -0.86
ZEB1-210ENST00000557827 WNT7AO00755 349 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 CHMP4BP1P59074 171 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 COL9A2Q14055 689 aaPredicted RBP9.7□□□□□ -0.86
ZEB1-210ENST00000557827 RASA3Q14644 834 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 BTLAQ7Z6A9 289 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
ZEB1-210ENST00000557827 GPC6Q9Y625 555 aaPredicted RBP9.7□□□□□ -0.86
ZEB1-210ENST00000557827 SLC27A3Q5K4L6 730 aa9.69□□□□□ -0.86
ZEB1-210ENST00000557827 KIAA0319Q5VV43 1072 aa9.69□□□□□ -0.86
ZEB1-210ENST00000557827 FBXL19Q6PCT2 694 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms