RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 SUSD4Q5VX71 490 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 LMBR1LQ6UX01 489 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 FAM89AQ96GI7 184 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 COPRSQ9NQ92 184 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-212ENST00000557641 BAG6P46379 1132 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 RGS3P49796 1198 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 G3BP1Q13283 466 aaKnown RBP eCLIP12.66□□□□□ -0.38
GABRB3-212ENST00000557641 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
GABRB3-212ENST00000557641 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.38
GABRB3-212ENST00000557641 PHF14O94880 888 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 NTSR2O95665 410 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 PYGBP11216 843 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-212ENST00000557641 CLCN6P51797 869 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 OS9Q13438 667 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-212ENST00000557641 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-212ENST00000557641 JARID2Q92833 1246 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-212ENST00000557641 TFCP2L1Q9NZI6 479 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 ANKRD36CQ5JPF3 1778 aa12.65□□□□□ -0.38
GABRB3-212ENST00000557641 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 PDE4AP27815 886 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 CTSWP56202 376 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 CCDC57Q2TAC2 916 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-212ENST00000557641 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
GABRB3-212ENST00000557641 TNS1Q9HBL0 1735 aaKnown RBP12.64□□□□□ -0.39
GABRB3-212ENST00000557641 NUP98P52948 1817 aa12.64□□□□□ -0.39
GABRB3-212ENST00000557641 CIAO1O76071 339 aa12.63□□□□□ -0.39
GABRB3-212ENST00000557641 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
GABRB3-212ENST00000557641 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
GABRB3-212ENST00000557641 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
GABRB3-212ENST00000557641 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
GABRB3-212ENST00000557641 CHMP3Q9Y3E7 222 aa12.63□□□□□ -0.39
GABRB3-212ENST00000557641 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 RTL9Q8NET4 1388 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 APBB1O00213 710 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 GYS1P13807 737 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-212ENST00000557641 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-212ENST00000557641 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
GABRB3-212ENST00000557641 ANKRD18BA2A2Z9 1011 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-212ENST00000557641 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-212ENST00000557641 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-212ENST00000557641 EZH2Q15910 746 aaKnown RBP12.61□□□□□ -0.39
GABRB3-212ENST00000557641 ZNF827Q17R98 1081 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 BICDL1Q6ZP65 573 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 PLEKHM2Q8IWE5 1019 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 KIF12Q96FN5 646 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 PA2G4Q9UQ80 394 aaKnown RBP12.61□□□□□ -0.39
GABRB3-212ENST00000557641 AOX1Q06278 1338 aa12.61□□□□□ -0.39
GABRB3-212ENST00000557641 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 EYA2O00167 538 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-212ENST00000557641 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-212ENST00000557641 TM4SF1P30408 202 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 NFIXQ14938 502 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
GABRB3-212ENST00000557641 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 BMP2KLQ5H9B9 411 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 GPR108Q9NPR9 543 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
GABRB3-212ENST00000557641 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 SASH1O94885 1247 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-212ENST00000557641 ITGA6P23229 1130 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 RIC1Q4ADV7 1423 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 SALL3Q9BXA9 1300 aa12.59□□□□□ -0.39
GABRB3-212ENST00000557641 NPHP1O15259 732 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 MAP3K13O43283 966 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
GABRB3-212ENST00000557641 GABBR2O75899 941 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
GABRB3-212ENST00000557641 MX1P20591 662 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms