RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CCDC85AQ96PX6 553 aaPredicted RBP14.28□□□□□ -0.12
APEX1-220ENST00000557592 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
APEX1-220ENST00000557592 BCS1LQ9Y276 419 aa14.28□□□□□ -0.12
APEX1-220ENST00000557592 TAF1P21675 1872 aa14.27□□□□□ -0.12
APEX1-220ENST00000557592 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.13
APEX1-220ENST00000557592 CCDC152Q4G0S7 254 aa14.27□□□□□ -0.13
APEX1-220ENST00000557592 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.13
APEX1-220ENST00000557592 C20orf194Q5TEA3 1177 aa14.27□□□□□ -0.13
APEX1-220ENST00000557592 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
APEX1-220ENST00000557592 TTLL6Q8N841 843 aa14.27□□□□□ -0.13
APEX1-220ENST00000557592 CNKSR1Q969H4 720 aa14.27□□□□□ -0.13
APEX1-220ENST00000557592 MEIS3Q99687 375 aa14.27□□□□□ -0.13
APEX1-220ENST00000557592 GNAI3P08754 354 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 ALDH1B1P30837 517 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 FOXO4P98177 505 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 GPR162Q16538 588 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 EPHA10Q5JZY3 1008 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 PRPF40BQ6NWY9 871 aaKnown RBP14.26□□□□□ -0.13
APEX1-220ENST00000557592 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 COG6Q9Y2V7 657 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 SLX4Q8IY92 1834 aa14.26□□□□□ -0.13
APEX1-220ENST00000557592 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
APEX1-220ENST00000557592 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 KAZALD1Q96I82 304 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 CRAMP1Q96RY5 1269 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
APEX1-220ENST00000557592 GREM2Q9H772 168 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
APEX1-220ENST00000557592 HDAC5Q9UQL6 1122 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
APEX1-220ENST00000557592 ARFGEF1Q9Y6D6 1849 aa14.25□□□□□ -0.13
APEX1-220ENST00000557592 CSF1RP07333 972 aa14.24□□□□□ -0.13
APEX1-220ENST00000557592 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.136e-9■■□□□ 12.2
APEX1-220ENST00000557592 GRAPQ13588 217 aa14.24□□□□□ -0.13
APEX1-220ENST00000557592 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
APEX1-220ENST00000557592 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
APEX1-220ENST00000557592 SEC31BQ9NQW1 1179 aa14.24□□□□□ -0.13
APEX1-220ENST00000557592 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
APEX1-220ENST00000557592 PPEF1O14829 653 aaPredicted RBP14.23□□□□□ -0.13
APEX1-220ENST00000557592 LRRFIP2Q9Y608 721 aaKnown RBP14.23□□□□□ -0.13
APEX1-220ENST00000557592 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
APEX1-220ENST00000557592 C21orf2O43822 256 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 GNAI2P04899 355 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 ITGA6P23229 1130 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 IFIT5Q13325 482 aaKnown RBP14.22□□□□□ -0.13
APEX1-220ENST00000557592 ANKRD44Q8N8A2 993 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 CELF1Q92879 486 aaKnown RBP14.22□□□□□ -0.13
APEX1-220ENST00000557592 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
APEX1-220ENST00000557592 DDX19BQ9UMR2 479 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 COL4A1P02462 1669 aa14.22□□□□□ -0.13
APEX1-220ENST00000557592 ANKRD18BA2A2Z9 1011 aa14.21□□□□□ -0.13
APEX1-220ENST00000557592 BBOX1O75936 387 aa14.21□□□□□ -0.13
APEX1-220ENST00000557592 RPS8P62241 208 aaKnown RBP14.21□□□□□ -0.13
APEX1-220ENST00000557592 CCDC57Q2TAC2 916 aa14.21□□□□□ -0.13
APEX1-220ENST00000557592 RABL6Q3YEC7 729 aaPredicted RBP14.21□□□□□ -0.13
APEX1-220ENST00000557592 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.13
APEX1-220ENST00000557592 C1orf115Q9H7X2 142 aa14.21□□□□□ -0.13
APEX1-220ENST00000557592 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
APEX1-220ENST00000557592 TAF7LQ5H9L4 462 aa14.2□□□□□ -0.14
APEX1-220ENST00000557592 OLFM4Q6UX06 510 aa14.2□□□□□ -0.14
APEX1-220ENST00000557592 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
APEX1-220ENST00000557592 TMX4Q9H1E5 349 aaPredicted RBP14.2□□□□□ -0.14
APEX1-220ENST00000557592 GRIN3BO60391 1043 aa14.19□□□□□ -0.14
APEX1-220ENST00000557592 IGHMBP2P38935 993 aaKnown RBP14.19□□□□□ -0.14
APEX1-220ENST00000557592 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
APEX1-220ENST00000557592 TMC4Q7Z404 712 aa14.19□□□□□ -0.14
APEX1-220ENST00000557592 SLC51AQ86UW1 340 aa14.19□□□□□ -0.14
APEX1-220ENST00000557592 CHMP4BQ9H444 224 aaKnown RBP14.19□□□□□ -0.14
APEX1-220ENST00000557592 ATP6V0A2Q9Y487 856 aa14.19□□□□□ -0.14
APEX1-220ENST00000557592 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
APEX1-220ENST00000557592 ARHGAP27Q6ZUM4 889 aa14.18□□□□□ -0.14
APEX1-220ENST00000557592 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
APEX1-220ENST00000557592 CRBNQ96SW2 442 aa14.18□□□□□ -0.14
APEX1-220ENST00000557592 MPHOSPH8Q99549 860 aa14.18□□□□□ -0.14
APEX1-220ENST00000557592 CC2D2BQ6DHV5 1058 aa14.17□□□□□ -0.14
APEX1-220ENST00000557592 SP8Q8IXZ3 490 aa14.17□□□□□ -0.14
APEX1-220ENST00000557592 ZBTB40Q9NUA8 1239 aa14.17□□□□□ -0.14
APEX1-220ENST00000557592 BSDC1Q9NW68 430 aaPredicted RBP14.17□□□□□ -0.14
APEX1-220ENST00000557592 LRRC37AA6NMS7 1700 aa14.17□□□□□ -0.14
APEX1-220ENST00000557592 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
APEX1-220ENST00000557592 SRGAP3O43295 1099 aa14.16□□□□□ -0.14
APEX1-220ENST00000557592 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
APEX1-220ENST00000557592 KLHDC4Q8TBB5 520 aa14.16□□□□□ -0.14
APEX1-220ENST00000557592 UTRNP46939 3433 aa14.16□□□□□ -0.14
APEX1-220ENST00000557592 RASSF7Q02833 373 aa14.15□□□□□ -0.14
APEX1-220ENST00000557592 MTX1Q13505 466 aa14.15□□□□□ -0.14
APEX1-220ENST00000557592 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
APEX1-220ENST00000557592 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
APEX1-220ENST00000557592 PNMA6EA0A0J9YXQ4 647 aa14.14□□□□□ -0.15
APEX1-220ENST00000557592 NFKBIEO00221 500 aa14.14□□□□□ -0.15
APEX1-220ENST00000557592 RFX5P48382 616 aaPredicted RBP14.14□□□□□ -0.15
APEX1-220ENST00000557592 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
APEX1-220ENST00000557592 GPSM2P81274 684 aa14.14□□□□□ -0.15
APEX1-220ENST00000557592 ATP8B2P98198 1209 aa14.14□□□□□ -0.15
APEX1-220ENST00000557592 GRIPAP1Q4V328 841 aa14.14□□□□□ -0.15
APEX1-220ENST00000557592 CEP85Q6P2H3 762 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms