RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-232ENST00000557442 PDE8AO60658 829 aa13.4□□□□□ -0.26
HNRNPC-232ENST00000557442 BCAR3O75815 825 aa13.4□□□□□ -0.26
HNRNPC-232ENST00000557442 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
HNRNPC-232ENST00000557442 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-232ENST00000557442 H7C1W4 665 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 RASSF7Q02833 373 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 GRM8O00222 908 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 YY1P25490 414 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 CTSWP56202 376 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 GRAPQ13588 217 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 CCDC85AQ96PX6 553 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-232ENST00000557442 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
HNRNPC-232ENST00000557442 CASP7P55210 303 aa13.38□□□□□ -0.27
HNRNPC-232ENST00000557442 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
HNRNPC-232ENST00000557442 TAOK3Q9H2K8 898 aa13.38□□□□□ -0.27
HNRNPC-232ENST00000557442 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 NFKBIEO00221 500 aa13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 SLC51AQ86UW1 340 aa13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 ARHGAP45Q92619 1136 aa13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 TMX4Q9H1E5 349 aaPredicted RBP13.37□□□□□ -0.27
HNRNPC-232ENST00000557442 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 TRIM27P14373 513 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 ATF7IPQ6VMQ6 1270 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 RNF181Q9P0P0 153 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
HNRNPC-232ENST00000557442 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 BBOX1O75936 387 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 LMNB1P20700 586 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 FAM161AQ3B820 660 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 C9orf131Q5VYM1 1079 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 CC2D2BQ6DHV5 1058 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 TMC4Q7Z404 712 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 GREM2Q9H772 168 aa13.35□□□□□ -0.27
HNRNPC-232ENST00000557442 PSME4Q14997 1843 aa13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 UTYO14607 1347 aa13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 FKBP4Q02790 459 aaKnown RBP eCLIP13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 CLUAP1Q96AJ1 413 aa13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
HNRNPC-232ENST00000557442 PRELPP51888 382 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 FOXO4P98177 505 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 POTEHQ6S545 545 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 USP44Q9H0E7 712 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
HNRNPC-232ENST00000557442 CSF1RP07333 972 aa13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 ITGA6P23229 1130 aa13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 EPHA10Q5JZY3 1008 aa13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 LMBR1LQ6UX01 489 aa13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 PSMD1Q99460 953 aa13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 COL4A5P29400 1685 aa13.32□□□□□ -0.28
HNRNPC-232ENST00000557442 UBTFL1P0CB47 393 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-232ENST00000557442 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-232ENST00000557442 MPNDQ8N594 471 aa13.31□□□□□ -0.28
HNRNPC-232ENST00000557442 BICC1Q9H694 974 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-232ENST00000557442 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
HNRNPC-232ENST00000557442 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 SCN4AP35499 1836 aa13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 ZC3H4Q9UPT8 1303 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-232ENST00000557442 WDR90Q96KV7 1748 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 CCDC57Q2TAC2 916 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 TAF7LQ5H9L4 462 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 TMEM57Q8N5G2 664 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 ANKRD44Q8N8A2 993 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms