RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 HSPA6P17066 643 aa18.32■□□□□ 0.52
LGMN-215ENST00000557315 LMNB1P20700 586 aa18.32■□□□□ 0.52
LGMN-215ENST00000557315 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
LGMN-215ENST00000557315 TAOK3Q9H2K8 898 aa18.32■□□□□ 0.52
LGMN-215ENST00000557315 ZBED9Q6R2W3 1325 aa18.31■□□□□ 0.52
LGMN-215ENST00000557315 GRAPQ13588 217 aa18.31■□□□□ 0.52
LGMN-215ENST00000557315 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
LGMN-215ENST00000557315 GRAPLQ8TC17 118 aaPredicted RBP18.31■□□□□ 0.52
LGMN-215ENST00000557315 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
LGMN-215ENST00000557315 KIF3CO14782 793 aa18.3■□□□□ 0.52
LGMN-215ENST00000557315 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
LGMN-215ENST00000557315 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
LGMN-215ENST00000557315 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
LGMN-215ENST00000557315 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
LGMN-215ENST00000557315 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
LGMN-215ENST00000557315 PDE8AO60658 829 aa18.29■□□□□ 0.52
LGMN-215ENST00000557315 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
LGMN-215ENST00000557315 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
LGMN-215ENST00000557315 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
LGMN-215ENST00000557315 BRPF1P55201 1214 aaPredicted RBP18.28■□□□□ 0.52
LGMN-215ENST00000557315 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
LGMN-215ENST00000557315 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
LGMN-215ENST00000557315 ZNF277Q9NRM2 450 aaPredicted RBP18.28■□□□□ 0.52
LGMN-215ENST00000557315 CTSWP56202 376 aa18.27■□□□□ 0.52
LGMN-215ENST00000557315 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.52
LGMN-215ENST00000557315 DDX46Q7L014 1031 aaKnown RBP18.27■□□□□ 0.52
LGMN-215ENST00000557315 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
LGMN-215ENST00000557315 PSMD1Q99460 953 aa18.27■□□□□ 0.52
LGMN-215ENST00000557315 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
LGMN-215ENST00000557315 RTL9Q8NET4 1388 aa18.27■□□□□ 0.51
LGMN-215ENST00000557315 WDR90Q96KV7 1748 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 PTPRCP08575 1304 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 BBOX1O75936 387 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 CC2D2BQ6DHV5 1058 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 SP8Q8IXZ3 490 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 RTKN2Q8IZC4 609 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 GREM2Q9H772 168 aa18.26■□□□□ 0.51
LGMN-215ENST00000557315 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
LGMN-215ENST00000557315 FOXO4P98177 505 aa18.25■□□□□ 0.51
LGMN-215ENST00000557315 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
LGMN-215ENST00000557315 NMRK2Q9NPI5 230 aa18.25■□□□□ 0.51
LGMN-215ENST00000557315 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
LGMN-215ENST00000557315 TOMM70O94826 608 aa18.24■□□□□ 0.51
LGMN-215ENST00000557315 CSF1RP07333 972 aa18.24■□□□□ 0.51
LGMN-215ENST00000557315 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
LGMN-215ENST00000557315 TNNQ9UQP3 1299 aa18.24■□□□□ 0.51
LGMN-215ENST00000557315 UTYO14607 1347 aa18.23■□□□□ 0.51
LGMN-215ENST00000557315 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
LGMN-215ENST00000557315 GRM8O00222 908 aa18.23■□□□□ 0.51
LGMN-215ENST00000557315 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
LGMN-215ENST00000557315 FAM161AQ3B820 660 aa18.23■□□□□ 0.51
LGMN-215ENST00000557315 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
LGMN-215ENST00000557315 POTECB2RU33 542 aa18.22■□□□□ 0.51
LGMN-215ENST00000557315 BCAR3O75815 825 aa18.22■□□□□ 0.51
LGMN-215ENST00000557315 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
LGMN-215ENST00000557315 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
LGMN-215ENST00000557315 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
LGMN-215ENST00000557315 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
LGMN-215ENST00000557315 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
LGMN-215ENST00000557315 SCN9AQ15858 1988 aa18.21■□□□□ 0.51
LGMN-215ENST00000557315 GLTPD2A6NH11 291 aa18.21■□□□□ 0.51
LGMN-215ENST00000557315 APLP1P51693 650 aa18.21■□□□□ 0.51
LGMN-215ENST00000557315 GPSM2P81274 684 aa18.21■□□□□ 0.51
LGMN-215ENST00000557315 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
LGMN-215ENST00000557315 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
LGMN-215ENST00000557315 FZD9O00144 591 aa18.2■□□□□ 0.5
LGMN-215ENST00000557315 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
LGMN-215ENST00000557315 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
LGMN-215ENST00000557315 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
LGMN-215ENST00000557315 AOC3Q16853 763 aa18.19■□□□□ 0.5
LGMN-215ENST00000557315 GRIPAP1Q4V328 841 aa18.19■□□□□ 0.5
LGMN-215ENST00000557315 TMC4Q7Z404 712 aa18.19■□□□□ 0.5
LGMN-215ENST00000557315 MPNDQ8N594 471 aa18.19■□□□□ 0.5
LGMN-215ENST00000557315 GPR101Q96P66 508 aaPredicted RBP18.19■□□□□ 0.5
LGMN-215ENST00000557315 USP44Q9H0E7 712 aa18.19■□□□□ 0.5
LGMN-215ENST00000557315 DPP8Q6V1X1 898 aaPredicted RBP18.18■□□□□ 0.5
LGMN-215ENST00000557315 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
LGMN-215ENST00000557315 PSME4Q14997 1843 aa18.17■□□□□ 0.5
LGMN-215ENST00000557315 DDNO94850 711 aaPredicted RBP18.17■□□□□ 0.5
LGMN-215ENST00000557315 ITGA6P23229 1130 aa18.17■□□□□ 0.5
LGMN-215ENST00000557315 ANKRD44Q8N8A2 993 aa18.17■□□□□ 0.5
LGMN-215ENST00000557315 RBM46Q8TBY0 533 aaKnown RBP18.17■□□□□ 0.5
LGMN-215ENST00000557315 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
LGMN-215ENST00000557315 SCN4AP35499 1836 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 TRIM27P14373 513 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 IFFO2Q5TF58 517 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 LMBR1LQ6UX01 489 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 ANKRD18AQ8IVF6 992 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 RRAGCQ9HB90 399 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 ADAMTSL1Q8N6G6 1762 aa18.16■□□□□ 0.5
LGMN-215ENST00000557315 YDJCA8MPS7 323 aa18.15■□□□□ 0.5
LGMN-215ENST00000557315 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
LGMN-215ENST00000557315 RABL6Q3YEC7 729 aaPredicted RBP18.15■□□□□ 0.5
LGMN-215ENST00000557315 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
LGMN-215ENST00000557315 C9orf78Q9NZ63 289 aaPredicted RBP18.15■□□□□ 0.5
LGMN-215ENST00000557315 MINPP1Q9UNW1 487 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms