RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
VSX1-207ENST00000557285 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
VSX1-207ENST00000557285 NEXNQ0ZGT2 675 aa21.2■□□□□ 0.98
VSX1-207ENST00000557285 DPP8Q6V1X1 898 aaPredicted RBP21.2■□□□□ 0.98
VSX1-207ENST00000557285 CELF1Q92879 486 aaKnown RBP21.2■□□□□ 0.98
VSX1-207ENST00000557285 COL4A1P02462 1669 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 FLIIQ13045 1269 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 FKBP5Q13451 457 aaPredicted RBP21.19■□□□□ 0.98
VSX1-207ENST00000557285 AOC3Q16853 763 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 CWF19L2Q2TBE0 894 aaKnown RBP21.19■□□□□ 0.98
VSX1-207ENST00000557285 GRIPAP1Q4V328 841 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 SP8Q8IXZ3 490 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 SMC1BQ8NDV3 1235 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
VSX1-207ENST00000557285 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
VSX1-207ENST00000557285 IGKV5-2P06315 115 aa21.18■□□□□ 0.98
VSX1-207ENST00000557285 FSTL1Q12841 308 aa21.18■□□□□ 0.98
VSX1-207ENST00000557285 SF3B3Q15393 1217 aaKnown RBP21.18■□□□□ 0.98
VSX1-207ENST00000557285 MPNDQ8N594 471 aa21.18■□□□□ 0.98
VSX1-207ENST00000557285 FZD9O00144 591 aa21.17■□□□□ 0.98
VSX1-207ENST00000557285 EIF6P56537 245 aaKnown RBP21.17■□□□□ 0.98
VSX1-207ENST00000557285 NIM1KQ8IY84 436 aa21.17■□□□□ 0.98
VSX1-207ENST00000557285 CACNA1FO60840 1977 aa21.17■□□□□ 0.98
VSX1-207ENST00000557285 APLP1P51693 650 aa21.16■□□□□ 0.98
VSX1-207ENST00000557285 HTRA3P83110 453 aa21.16■□□□□ 0.98
VSX1-207ENST00000557285 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
VSX1-207ENST00000557285 PDE8AO60658 829 aa21.15■□□□□ 0.98
VSX1-207ENST00000557285 POTEIP0CG38 1075 aa21.15■□□□□ 0.98
VSX1-207ENST00000557285 POTEJP0CG39 1038 aa21.15■□□□□ 0.98
VSX1-207ENST00000557285 HSP90B1P14625 803 aaKnown RBP21.15■□□□□ 0.98
VSX1-207ENST00000557285 SUPT20HQ8NEM7 779 aa21.15■□□□□ 0.98
VSX1-207ENST00000557285 SCN4AP35499 1836 aa21.14■□□□□ 0.97
VSX1-207ENST00000557285 IQCA1LA6NCM1 817 aa21.14■□□□□ 0.97
VSX1-207ENST00000557285 NEURL1BA8MQ27 555 aa21.14■□□□□ 0.97
VSX1-207ENST00000557285 CCDC152Q4G0S7 254 aa21.14■□□□□ 0.97
VSX1-207ENST00000557285 EAPPQ56P03 285 aaPredicted RBP21.14■□□□□ 0.97
VSX1-207ENST00000557285 NSFL1CQ9UNZ2 370 aaKnown RBP21.14■□□□□ 0.97
VSX1-207ENST00000557285 LRRC37AA6NMS7 1700 aa21.14■□□□□ 0.97
VSX1-207ENST00000557285 ZNF521Q96K83 1311 aa21.13■□□□□ 0.97
VSX1-207ENST00000557285 RPS8P62241 208 aaKnown RBP21.13■□□□□ 0.97
VSX1-207ENST00000557285 UBE3BQ7Z3V4 1068 aa21.13■□□□□ 0.97
VSX1-207ENST00000557285 TMC4Q7Z404 712 aa21.13■□□□□ 0.97
VSX1-207ENST00000557285 GPC2Q8N158 579 aa21.13■□□□□ 0.97
VSX1-207ENST00000557285 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
VSX1-207ENST00000557285 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
VSX1-207ENST00000557285 TAF1DQ9H5J8 278 aaPredicted RBP21.13■□□□□ 0.97
VSX1-207ENST00000557285 F6X3S4 739 aa21.12■□□□□ 0.97
VSX1-207ENST00000557285 GPSM2P81274 684 aa21.12■□□□□ 0.97
VSX1-207ENST00000557285 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
VSX1-207ENST00000557285 HACL1Q9UJ83 578 aa21.12■□□□□ 0.97
VSX1-207ENST00000557285 MYH3P11055 1940 aa21.12■□□□□ 0.97
VSX1-207ENST00000557285 SPEF2Q9C093 1822 aa21.11■□□□□ 0.97
VSX1-207ENST00000557285 DUOX1Q9NRD9 1551 aa21.11■□□□□ 0.97
VSX1-207ENST00000557285 C6orf229H3BNL8 230 aa21.11■□□□□ 0.97
VSX1-207ENST00000557285 CTSWP56202 376 aa21.11■□□□□ 0.97
VSX1-207ENST00000557285 GPR101Q96P66 508 aaPredicted RBP21.11■□□□□ 0.97
VSX1-207ENST00000557285 CDHR2Q9BYE9 1310 aa21.1■□□□□ 0.97
VSX1-207ENST00000557285 RIMBP2O15034 1052 aa21.1■□□□□ 0.97
VSX1-207ENST00000557285 EPHX2P34913 555 aa21.1■□□□□ 0.97
VSX1-207ENST00000557285 CLEC11AQ9Y240 323 aa21.1■□□□□ 0.97
VSX1-207ENST00000557285 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
VSX1-207ENST00000557285 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
VSX1-207ENST00000557285 GCKRQ14397 625 aa21.09■□□□□ 0.97
VSX1-207ENST00000557285 CHADLQ6NUI6 762 aa21.09■□□□□ 0.97
VSX1-207ENST00000557285 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
VSX1-207ENST00000557285 RAD17O75943 681 aa21.08■□□□□ 0.97
VSX1-207ENST00000557285 LMOD1P29536 600 aaPredicted RBP21.08■□□□□ 0.97
VSX1-207ENST00000557285 ANKRD18AQ8IVF6 992 aa21.08■□□□□ 0.97
VSX1-207ENST00000557285 VPS33BQ9H267 617 aa21.08■□□□□ 0.97
VSX1-207ENST00000557285 GREM2Q9H772 168 aa21.08■□□□□ 0.97
VSX1-207ENST00000557285 ANKIB1Q9P2G1 1089 aa21.08■□□□□ 0.97
VSX1-207ENST00000557285 E9PSI1 815 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 WASHC4Q2M389 1173 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 LDHDQ86WU2 507 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 LINS1Q8NG48 757 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 POLLQ9UGP5 575 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 LTBP1Q14766 1721 aa21.07■□□□□ 0.96
VSX1-207ENST00000557285 H7C1W4 665 aa21.06■□□□□ 0.96
VSX1-207ENST00000557285 UFL1O94874 794 aa21.06■□□□□ 0.96
VSX1-207ENST00000557285 CXCL9Q07325 125 aa21.06■□□□□ 0.96
VSX1-207ENST00000557285 TTLL11Q8NHH1 800 aa21.06■□□□□ 0.96
VSX1-207ENST00000557285 DBNDD1Q9H9R9 158 aa21.06■□□□□ 0.96
VSX1-207ENST00000557285 EPS15P42566 896 aa21.05■□□□□ 0.96
VSX1-207ENST00000557285 SCNN1DP51172 638 aa21.05■□□□□ 0.96
VSX1-207ENST00000557285 DOK7Q18PE1 504 aa21.05■□□□□ 0.96
VSX1-207ENST00000557285 TBC1D16Q8TBP0 767 aa21.05■□□□□ 0.96
VSX1-207ENST00000557285 CDC5LQ99459 802 aaKnown RBP21.05■□□□□ 0.96
VSX1-207ENST00000557285 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
VSX1-207ENST00000557285 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
VSX1-207ENST00000557285 CIAPIN1Q6FI81 312 aa21.04■□□□□ 0.96
VSX1-207ENST00000557285 EYA3Q99504 573 aa21.04■□□□□ 0.96
VSX1-207ENST00000557285 BCL2L13Q9BXK5 485 aa21.04■□□□□ 0.96
VSX1-207ENST00000557285 GMPSP49915 693 aaPredicted RBP21.03■□□□□ 0.96
VSX1-207ENST00000557285 FAM161AQ3B820 660 aa21.03■□□□□ 0.96
VSX1-207ENST00000557285 BEND3Q5T5X7 828 aa21.03■□□□□ 0.96
VSX1-207ENST00000557285 PNMA8AQ86V59 439 aaPredicted RBP21.03■□□□□ 0.96
VSX1-207ENST00000557285 GGA1Q9UJY5 639 aa21.03■□□□□ 0.96
VSX1-207ENST00000557285 G3V3G9 751 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms