RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 EPHA4P54764 986 aa8.35□□□□□ -1.07
FOXN3-215ENST00000557261 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-215ENST00000557261 PLCB3Q01970 1234 aa8.35□□□□□ -1.07
FOXN3-215ENST00000557261 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-215ENST00000557261 PTPRMP28827 1452 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 MYOM2P54296 1465 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 MADDQ8WXG6 1647 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 FOXO3O43524 673 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 COX20Q5RI15 118 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 ZNF598Q86UK7 904 aaKnown RBP8.34□□□□□ -1.07
FOXN3-215ENST00000557261 LNPKQ9C0E8 428 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 CAPN10Q9HC96 672 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 IQSEC3Q9UPP2 1182 aaPredicted RBP8.34□□□□□ -1.07
FOXN3-215ENST00000557261 SYNMO15061 1565 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 SPATA31D1Q6ZQQ2 1576 aa8.34□□□□□ -1.07
FOXN3-215ENST00000557261 ADAMTSL3P82987 1691 aa8.34□□□□□ -1.08
FOXN3-215ENST00000557261 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.08
FOXN3-215ENST00000557261 PPLO60437 1756 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 PRPF40AO75400 957 aaKnown RBP8.33□□□□□ -1.08
FOXN3-215ENST00000557261 GDF10P55107 478 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 DAB2P98082 770 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
FOXN3-215ENST00000557261 MYCP01106 439 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-215ENST00000557261 SH3BP2P78314 561 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 AAMPQ13685 434 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
FOXN3-215ENST00000557261 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-215ENST00000557261 CHMP4AQ9BY43 222 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 OSBPL3Q9H4L5 887 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 PRKAG2Q9UGJ0 569 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 LRFN2Q9ULH4 789 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
FOXN3-215ENST00000557261 PRAG1Q86YV5 1406 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 PSMD2Q13200 908 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 L3MBTL2Q969R5 705 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 FAM129BQ96TA1 746 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 NIF3L1Q9GZT8 377 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 ETNK1Q9HBU6 452 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 FCF1Q9Y324 198 aaKnown RBP8.31□□□□□ -1.08
FOXN3-215ENST00000557261 EMILIN1Q9Y6C2 1016 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 USP3Q9Y6I4 520 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 GPRASP1Q5JY77 1395 aa8.31□□□□□ -1.08
FOXN3-215ENST00000557261 SORBS3O60504 671 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 PRR20EP86478 221 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 PRR20CP86479 221 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 PRR20DP86480 221 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 PRR20BP86481 221 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 PRR20AP86496 221 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 RNF34Q969K3 372 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 QTRT2Q9H974 415 aaKnown RBP8.3□□□□□ -1.08
FOXN3-215ENST00000557261 CYLDQ9NQC7 956 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 ERVK-7P63135 1459 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 LMTK3Q96Q04 1460 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 IQGAP1P46940 1657 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
FOXN3-215ENST00000557261 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
FOXN3-215ENST00000557261 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
FOXN3-215ENST00000557261 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 ILDR2Q71H61 639 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 TRMT44Q8IYL2 757 aaKnown RBP8.29□□□□□ -1.08
FOXN3-215ENST00000557261 SEPT12Q8IYM1 358 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 VTI1AQ96AJ9 217 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 CFHR5Q9BXR6 569 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 PIF1Q9H611 641 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 CCSER2Q9H7U1 834 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 SETBP1Q9Y6X0 1596 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 TMEM131LA2VDJ0 1609 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
FOXN3-215ENST00000557261 UGGT1Q9NYU2 1555 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 PNMA6FA0A0J9YX94 578 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 CTSHP09668 335 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 ZNF76P36508 570 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 STIM2Q9P246 746 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 PCDHGB7Q9Y5F8 929 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 ZFYVE9O95405 1425 aa8.28□□□□□ -1.08
FOXN3-215ENST00000557261 ANKRD62A6NC57 917 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 GDF9O60383 454 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 INHAP05111 366 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 FOXK2Q01167 660 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
FOXN3-215ENST00000557261 ZNF394Q53GI3 561 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 SH3PXD2AQ5TCZ1 1133 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 SLC9A9Q8IVB4 645 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-215ENST00000557261 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 POLIQ9UNA4 740 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 MYO3AQ8NEV4 1616 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 NEXMIFQ5QGS0 1516 aa8.27□□□□□ -1.09
FOXN3-215ENST00000557261 MYO5BQ9ULV0 1848 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms