RNA–Protein interactions for RNA: ENST00000557254.5

SLC35F4-207, Transcript of solute carrier family 35 member F4, humanhuman

TSL 1 (best)

Gene SLC35F4, Length 2,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35F4-207ENST00000557254 NBPF5PQ86XG9 351 aaPredicted RBP11.34□□□□□ -0.59
SLC35F4-207ENST00000557254 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
SLC35F4-207ENST00000557254 DEKP35659 375 aaKnown RBP11.33□□□□□ -0.6
SLC35F4-207ENST00000557254 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
SLC35F4-207ENST00000557254 ABCC12Q96J65 1359 aa11.33□□□□□ -0.6
SLC35F4-207ENST00000557254 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
SLC35F4-207ENST00000557254 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
SLC35F4-207ENST00000557254 GRIN3BO60391 1043 aa11.32□□□□□ -0.6
SLC35F4-207ENST00000557254 ZNF609O15014 1411 aa11.32□□□□□ -0.6
SLC35F4-207ENST00000557254 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
SLC35F4-207ENST00000557254 SNED1Q8TER0 1413 aa11.32□□□□□ -0.6
SLC35F4-207ENST00000557254 ARAP2Q8WZ64 1704 aa11.32□□□□□ -0.6
SLC35F4-207ENST00000557254 NPR1P16066 1061 aa11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 ZBTB7AO95365 584 aa11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 SYT17Q9BSW7 474 aa11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 USP44Q9H0E7 712 aa11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 PPP1R1BQ9UD71 204 aaPredicted RBP11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
SLC35F4-207ENST00000557254 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 CNKSR1Q969H4 720 aa11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
SLC35F4-207ENST00000557254 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 CTSWP56202 376 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 CACNA1SQ13698 1873 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 F6X3S4 739 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 FOXO4P98177 505 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 SRGNP10124 158 aa11.29□□□□□ -0.6
SLC35F4-207ENST00000557254 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 ZBTB40Q9NUA8 1239 aa11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 BBOX1O75936 387 aa11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 GNAI2P04899 355 aa11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
SLC35F4-207ENST00000557254 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 CIAO1O76071 339 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 RLBP1P12271 317 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 GPTP24298 496 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 POLA2Q14181 598 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 H0YIN7 160 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 KCNA3P22001 575 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 GRAPQ13588 217 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 MSL1Q68DK7 614 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 TTLL11Q8NHH1 800 aa11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
SLC35F4-207ENST00000557254 SLX4Q8IY92 1834 aa11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 MMP14P50281 582 aa11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 CDC5LQ99459 802 aaKnown RBP11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
SLC35F4-207ENST00000557254 UBE3BQ7Z3V4 1068 aa11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 ZNF646O15015 1829 aaPredicted RBP11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 SCN4AP35499 1836 aa11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
SLC35F4-207ENST00000557254 GTF2E1P29083 439 aaPredicted RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 BICDL1Q6ZP65 573 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 ITPRIPQ8IWB1 547 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 FAM89AQ96GI7 184 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 NBPF7P0C2Y1 421 aaPredicted RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 RFX5P48382 616 aaPredicted RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 NAP1L5Q96NT1 182 aaPredicted RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 PSMD1Q99460 953 aa11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 BSDC1Q9NW68 430 aaPredicted RBP11.24□□□□□ -0.61
SLC35F4-207ENST00000557254 CCDC88AQ3V6T2 1871 aa11.23□□□□□ -0.61
SLC35F4-207ENST00000557254 DDX46Q7L014 1031 aaKnown RBP11.23□□□□□ -0.61
SLC35F4-207ENST00000557254 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
SLC35F4-207ENST00000557254 MEIS3Q99687 375 aa11.23□□□□□ -0.61
SLC35F4-207ENST00000557254 ANKRD18BA2A2Z9 1011 aa11.23□□□□□ -0.61
SLC35F4-207ENST00000557254 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms