RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
HNRNPC-230ENST00000557201 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.17
HNRNPC-230ENST00000557201 THSD7BQ9C0I4 1608 aa14.02□□□□□ -0.17
HNRNPC-230ENST00000557201 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
HNRNPC-230ENST00000557201 DUOX1Q9NRD9 1551 aa14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 GRAPQ13588 217 aa14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 SUPT20HQ8NEM7 779 aa14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 GRAPLQ8TC17 118 aaPredicted RBP14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 ADARB2Q9NS39 739 aaKnown RBP14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 SH3TC1Q8TE82 1336 aa14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 MYBBP1AQ9BQG0 1328 aaKnown RBP14.01□□□□□ -0.17
HNRNPC-230ENST00000557201 TRAF5O00463 557 aa14□□□□□ -0.17
HNRNPC-230ENST00000557201 DPP8Q6V1X1 898 aaPredicted RBP14□□□□□ -0.17
HNRNPC-230ENST00000557201 AIDAQ96BJ3 306 aa14□□□□□ -0.17
HNRNPC-230ENST00000557201 CHPF2Q9P2E5 772 aa14□□□□□ -0.17
HNRNPC-230ENST00000557201 PGAP2Q9UHJ9 254 aa14□□□□□ -0.17
HNRNPC-230ENST00000557201 TRMT112Q9UI30 125 aaKnown RBP14□□□□□ -0.17
HNRNPC-230ENST00000557201 ABT1Q9ULW3 272 aaKnown RBP14□□□□□ -0.17
HNRNPC-230ENST00000557201 HOXB7P09629 217 aa13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 LBX1P52954 281 aa13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 MPNDQ8N594 471 aa13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 ISCA1Q9BUE6 129 aa13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 LRRC37AA6NMS7 1700 aa13.99□□□□□ -0.17
HNRNPC-230ENST00000557201 YDJCA8MPS7 323 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 GMPSP49915 693 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 HIRAP54198 1017 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 MAP2K1Q02750 393 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 NEUROD2Q15784 382 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 TLL2Q9Y6L7 1015 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 CDHR2Q9BYE9 1310 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 TRPM7Q96QT4 1865 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 COL4A1P02462 1669 aa13.98□□□□□ -0.17
HNRNPC-230ENST00000557201 ANP32CO43423 234 aa13.97□□□□□ -0.17
HNRNPC-230ENST00000557201 SF3B3Q15393 1217 aaKnown RBP13.97□□□□□ -0.17
HNRNPC-230ENST00000557201 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
HNRNPC-230ENST00000557201 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
HNRNPC-230ENST00000557201 CAPNS2Q96L46 248 aa13.97□□□□□ -0.17
HNRNPC-230ENST00000557201 TAF1P21675 1872 aa13.97□□□□□ -0.17
HNRNPC-230ENST00000557201 RAD17O75943 681 aa13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 TRIM28Q13263 835 aaKnown RBP13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 HDGFL1Q5TGJ6 251 aa13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 ADAMTS8Q9UP79 889 aa13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-230ENST00000557201 ZNF853P0CG23 659 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 ECE1P42892 770 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 CYP4F22Q6NT55 531 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 SAPCD2Q86UD0 394 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 TRPM4Q8TD43 1214 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 ZNF428Q96B54 188 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 FAM89AQ96GI7 184 aa13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 DBF4Q9UBU7 674 aaPredicted RBP13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.18
HNRNPC-230ENST00000557201 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
HNRNPC-230ENST00000557201 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
HNRNPC-230ENST00000557201 TNIP1Q15025 636 aa13.95□□□□□ -0.18
HNRNPC-230ENST00000557201 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
HNRNPC-230ENST00000557201 GPR101Q96P66 508 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-230ENST00000557201 GLIS2Q9BZE0 524 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-230ENST00000557201 CELF2O95319 508 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 MAP2K2P36507 400 aa13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 HHIPL1Q96JK4 782 aa13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 BCL2L13Q9BXK5 485 aa13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 MBIPQ9NS73 344 aa13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 HYPKQ9NX55 129 aa13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 CNOT7Q9UIV1 285 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-230ENST00000557201 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
HNRNPC-230ENST00000557201 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-230ENST00000557201 DPF2Q92785 391 aa13.93□□□□□ -0.18
HNRNPC-230ENST00000557201 POLLQ9UGP5 575 aa13.93□□□□□ -0.18
HNRNPC-230ENST00000557201 PSMD14O00487 310 aa13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 AOC2O75106 756 aa13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 GPSM2P81274 684 aa13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 WASHC4Q2M389 1173 aa13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 CDC37L1Q7L3B6 337 aa13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 NSFL1CQ9UNZ2 370 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
HNRNPC-230ENST00000557201 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 RPS8P62241 208 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 ABHD8Q96I13 439 aa13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 DBNDD1Q9H9R9 158 aa13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 KCNQ5Q9NR82 932 aa13.91□□□□□ -0.18
HNRNPC-230ENST00000557201 H7C1D1 291 aa13.9□□□□□ -0.18
HNRNPC-230ENST00000557201 EGFRP00533 1210 aa13.9□□□□□ -0.18
HNRNPC-230ENST00000557201 RTL5Q5HYW3 569 aaPredicted RBP13.9□□□□□ -0.18
HNRNPC-230ENST00000557201 ZBTB38Q8NAP3 1195 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms