RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ATP6V0A2Q9Y487 856 aa15.25■□□□□ 0.03
SYNE2-226ENST00000557084 ANKRD36CQ5JPF3 1778 aa15.24■□□□□ 0.03
SYNE2-226ENST00000557084 VAMP4O75379 141 aa15.24■□□□□ 0.03
SYNE2-226ENST00000557084 PCCAP05165 728 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-226ENST00000557084 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
SYNE2-226ENST00000557084 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
SYNE2-226ENST00000557084 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
SYNE2-226ENST00000557084 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
SYNE2-226ENST00000557084 G2E3Q7L622 706 aa15.23■□□□□ 0.03
SYNE2-226ENST00000557084 TMC4Q7Z404 712 aa15.23■□□□□ 0.03
SYNE2-226ENST00000557084 LARGE2Q8N3Y3 721 aa15.23■□□□□ 0.03
SYNE2-226ENST00000557084 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
SYNE2-226ENST00000557084 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
SYNE2-226ENST00000557084 SP8Q8IXZ3 490 aa15.22■□□□□ 0.03
SYNE2-226ENST00000557084 MPNDQ8N594 471 aa15.22■□□□□ 0.03
SYNE2-226ENST00000557084 RBM46Q8TBY0 533 aaKnown RBP15.22■□□□□ 0.03
SYNE2-226ENST00000557084 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-226ENST00000557084 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.03
SYNE2-226ENST00000557084 E9PSI1 815 aa15.21■□□□□ 0.03
SYNE2-226ENST00000557084 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
SYNE2-226ENST00000557084 EIF6P56537 245 aaKnown RBP15.21■□□□□ 0.03
SYNE2-226ENST00000557084 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
SYNE2-226ENST00000557084 DIEXFQ68CQ4 756 aaKnown RBP15.21■□□□□ 0.03
SYNE2-226ENST00000557084 DNAAF4Q8WXU2 420 aa15.21■□□□□ 0.03
SYNE2-226ENST00000557084 PPIP5K2O43314 1243 aa15.2■□□□□ 0.02
SYNE2-226ENST00000557084 PDE8AO60658 829 aa15.2■□□□□ 0.02
SYNE2-226ENST00000557084 IGKV5-2P06315 115 aa15.2■□□□□ 0.02
SYNE2-226ENST00000557084 HSPA6P17066 643 aa15.2■□□□□ 0.02
SYNE2-226ENST00000557084 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
SYNE2-226ENST00000557084 NIM1KQ8IY84 436 aa15.2■□□□□ 0.02
SYNE2-226ENST00000557084 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
SYNE2-226ENST00000557084 ZNF521Q96K83 1311 aa15.19■□□□□ 0.02
SYNE2-226ENST00000557084 IQCA1LA6NCM1 817 aa15.19■□□□□ 0.02
SYNE2-226ENST00000557084 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
SYNE2-226ENST00000557084 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
SYNE2-226ENST00000557084 FSTL1Q12841 308 aa15.19■□□□□ 0.02
SYNE2-226ENST00000557084 SMC1BQ8NDV3 1235 aa15.19■□□□□ 0.02
SYNE2-226ENST00000557084 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-226ENST00000557084 AOC3Q16853 763 aa15.18■□□□□ 0.02
SYNE2-226ENST00000557084 UBE3BQ7Z3V4 1068 aa15.18■□□□□ 0.02
SYNE2-226ENST00000557084 SLC51AQ86UW1 340 aa15.18■□□□□ 0.02
SYNE2-226ENST00000557084 LINS1Q8NG48 757 aa15.18■□□□□ 0.02
SYNE2-226ENST00000557084 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
SYNE2-226ENST00000557084 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
SYNE2-226ENST00000557084 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
SYNE2-226ENST00000557084 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
SYNE2-226ENST00000557084 CDHR2Q9BYE9 1310 aa15.17■□□□□ 0.02
SYNE2-226ENST00000557084 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
SYNE2-226ENST00000557084 FZD9O00144 591 aa15.17■□□□□ 0.02
SYNE2-226ENST00000557084 GCKRQ14397 625 aa15.17■□□□□ 0.02
SYNE2-226ENST00000557084 GPC2Q8N158 579 aa15.17■□□□□ 0.02
SYNE2-226ENST00000557084 DICER1Q9UPY3 1922 aaKnown RBP15.16■□□□□ 0.02
SYNE2-226ENST00000557084 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
SYNE2-226ENST00000557084 APLP1P51693 650 aa15.16■□□□□ 0.02
SYNE2-226ENST00000557084 CTSWP56202 376 aa15.16■□□□□ 0.02
SYNE2-226ENST00000557084 ANKRD18AQ8IVF6 992 aa15.16■□□□□ 0.02
SYNE2-226ENST00000557084 RTFDC1Q9BY42 306 aaPredicted RBP15.16■□□□□ 0.02
SYNE2-226ENST00000557084 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
SYNE2-226ENST00000557084 ANKIB1Q9P2G1 1089 aa15.16■□□□□ 0.02
SYNE2-226ENST00000557084 F6X3S4 739 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
SYNE2-226ENST00000557084 SLFN5Q08AF3 891 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 SLC4A10Q6U841 1118 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 L3MBTL3Q96JM7 780 aaPredicted RBP15.15■□□□□ 0.02
SYNE2-226ENST00000557084 CDC5LQ99459 802 aaKnown RBP15.15■□□□□ 0.02
SYNE2-226ENST00000557084 HACL1Q9UJ83 578 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 ZNRF3Q9ULT6 936 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 SNED1Q8TER0 1413 aa15.15■□□□□ 0.02
SYNE2-226ENST00000557084 POTECB2RU33 542 aa15.14■□□□□ 0.01
SYNE2-226ENST00000557084 H7C1W4 665 aa15.14■□□□□ 0.01
SYNE2-226ENST00000557084 ATXN8OSP0DMR3 200 aa15.14■□□□□ 0.01
SYNE2-226ENST00000557084 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
SYNE2-226ENST00000557084 MIER1Q8N108 512 aa15.14■□□□□ 0.01
SYNE2-226ENST00000557084 EYA3Q99504 573 aa15.14■□□□□ 0.01
SYNE2-226ENST00000557084 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
SYNE2-226ENST00000557084 LAMB2P55268 1798 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 G3V3G9 751 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 GPSM2P81274 684 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 TTLL11Q8NHH1 800 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-226ENST00000557084 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
SYNE2-226ENST00000557084 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 UFL1O94874 794 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 EPHX2P34913 555 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 TNIP1Q15025 636 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 PNMA8AQ86V59 439 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-226ENST00000557084 GREM2Q9H772 168 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 C9orf78Q9NZ63 289 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-226ENST00000557084 GGA1Q9UJY5 639 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
SYNE2-226ENST00000557084 IGHMBP2P38935 993 aaKnown RBP15.11■□□□□ 0.01
SYNE2-226ENST00000557084 CHADLQ6NUI6 762 aa15.11■□□□□ 0.01
SYNE2-226ENST00000557084 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
SYNE2-226ENST00000557084 SRCIN1Q9C0H9 1055 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms