RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	GPR25	O00155	361 aa		7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	TAS1R3	Q7RTX0	852 aa		7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	OSBPL3	Q9H4L5	887 aa		7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	ARHGEF10L	Q9HCE6	1279 aa		7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	LRRC4B	Q9NT99	713 aa		7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	LRPPRC	P42704	1394 aa	Known RBP	7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	CEP350	Q5VT06	3117 aa		7.3	□□□□□ -1.24
SCFD1-223	ENST00000557076	DAPK1	P53355	1430 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	SLIT2	O94813	1529 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	WASL	O00401	505 aa	Predicted RBP	7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	GNRH1	P01148	92 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	BCR	P11274	1271 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	GPAT2	Q6NUI2	795 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	GTPBP3	Q969Y2	492 aa	Known RBP	7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	CAMKK2	Q96RR4	588 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	TIMMDC1	Q9NPL8	285 aa		7.29	□□□□□ -1.24
SCFD1-223	ENST00000557076	ANKRD50	Q9ULJ7	1429 aa		7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	UTRN	P46939	3433 aa		7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	MYC	P01106	439 aa	Predicted RBP	7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	F11	P03951	625 aa		7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	MX2	P20592	715 aa		7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	XPC	Q01831	940 aa	Predicted RBP	7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	ZNF326	Q5BKZ1	582 aa	Known RBP	7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	PODN	Q7Z5L7	613 aa		7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	MTMR14	Q8NCE2	650 aa		7.28	□□□□□ -1.24
SCFD1-223	ENST00000557076	SPATA31A3	Q5VYP0	1347 aa		7.27	□□□□□ -1.24
SCFD1-223	ENST00000557076	FAM83G	A6ND36	823 aa		7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	GPR37L1	O60883	481 aa		7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	EZH2	Q15910	746 aa	Known RBP	7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	BEND7	Q8N7W2	519 aa	Predicted RBP	7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	NEDD1	Q8NHV4	660 aa		7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	ESYT1	Q9BSJ8	1104 aa		7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	NUCKS1	Q9H1E3	243 aa	Known RBP	7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	CCDC9	Q9Y3X0	531 aa	Known RBP	7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	UNC13B	O14795	1591 aa		7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	LAMC1	P11047	1609 aa		7.27	□□□□□ -1.25
SCFD1-223	ENST00000557076	ROBO2	Q9HCK4	1378 aa		7.26	□□□□□ -1.25
SCFD1-223	ENST00000557076	GTF2E1	P29083	439 aa	Predicted RBP	7.26	□□□□□ -1.25
SCFD1-223	ENST00000557076	C1QTNF8	P60827	252 aa		7.26	□□□□□ -1.25
SCFD1-223	ENST00000557076	CNKSR1	Q969H4	720 aa		7.26	□□□□□ -1.25
SCFD1-223	ENST00000557076	SPON1	Q9HCB6	807 aa		7.26	□□□□□ -1.25
SCFD1-223	ENST00000557076	RAB6B	Q9NRW1	208 aa		7.26	□□□□□ -1.25
SCFD1-223	ENST00000557076		A0A1B0GTH6	734 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	KCNQ2	O43526	872 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	MAP2K3	P46734	347 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	BRPF1	P55201	1214 aa	Predicted RBP	7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	PSME1	Q06323	249 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	NBPF8	Q3BBV2	869 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	FAM196A	Q6ZSG2	479 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	KRT28	Q7Z3Y7	464 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	ACD	Q96AP0	544 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	CFHR5	Q9BXR6	569 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	CEP126	Q9P2H0	1117 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	DISP2	A7MBM2	1401 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	GLI3	P10071	1580 aa		7.25	□□□□□ -1.25
SCFD1-223	ENST00000557076	COL22A1	Q8NFW1	1626 aa	Predicted RBP	7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	IL2RA	P01589	272 aa		7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	CENPC	Q03188	943 aa		7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	LBR	Q14739	615 aa	Known RBP	7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	PRM3	Q9NNZ6	103 aa		7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	PHF24	Q9UPV7	400 aa		7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	HFM1	A2PYH4	1435 aa		7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	XRN1	Q8IZH2	1706 aa	Known RBP	7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	PXDN	Q92626	1479 aa		7.24	□□□□□ -1.25
SCFD1-223	ENST00000557076	PARD3	Q8TEW0	1356 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	OIP5	O43482	229 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	TRIM37	O94972	964 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	APBA3	O96018	575 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	GNAS	Q5JWF2	1037 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	FAM182B	Q5T319	152 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	SNRK	Q9NRH2	765 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	HRH3	Q9Y5N1	445 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	CNTNAP5	Q8WYK1	1306 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	ADGRL2	O95490	1459 aa		7.23	□□□□□ -1.25
SCFD1-223	ENST00000557076	NUP155	O75694	1391 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	NINL	Q9Y2I6	1382 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	VPS8	Q8N3P4	1428 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	TMEM214	Q6NUQ4	689 aa	Known RBP	7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	XAGE2	Q96GT9	111 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	DCAF5	Q96JK2	942 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	RPGRIP1L	Q68CZ1	1315 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	MYO5B	Q9ULV0	1848 aa		7.22	□□□□□ -1.25
SCFD1-223	ENST00000557076	SPHKAP	Q2M3C7	1700 aa		7.21	□□□□□ -1.25
SCFD1-223	ENST00000557076	PRAG1	Q86YV5	1406 aa		7.21	□□□□□ -1.25
SCFD1-223	ENST00000557076	PTPN23	Q9H3S7	1636 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	CSB-PGBD3	P0DP91	1061 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	USP4	Q13107	963 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	FAM50A	Q14320	339 aa	Known RBP	7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	PGBD3	Q8N328	593 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	GPAM	Q9HCL2	828 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	BTG4	Q9NY30	223 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	SPATA31A5	Q5VU36	1347 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	SPATA31A7	Q8IWB4	1347 aa		7.21	□□□□□ -1.26
SCFD1-223	ENST00000557076	GCC2	Q8IWJ2	1684 aa		7.2	□□□□□ -1.26

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