RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 GPTP24298 496 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 RBM17Q96I25 401 aaKnown RBP12.44□□□□□ -0.42
SYNE2-224ENST00000557024 CRAMP1Q96RY5 1269 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
SYNE2-224ENST00000557024 HIRAP54198 1017 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-224ENST00000557024 HUNKP57058 714 aa12.43□□□□□ -0.42
SYNE2-224ENST00000557024 DLK2Q6UY11 383 aa12.43□□□□□ -0.42
SYNE2-224ENST00000557024 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
SYNE2-224ENST00000557024 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 RAD17O75943 681 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
SYNE2-224ENST00000557024 SUSD4Q5VX71 490 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 CDC37L1Q7L3B6 337 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
SYNE2-224ENST00000557024 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-224ENST00000557024 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
SYNE2-224ENST00000557024 CASP8AP2Q9UKL3 1982 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-224ENST00000557024 PDE4DIPQ5VU43 2346 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 TTLL7Q6ZT98 887 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 ZC3H15Q8WU90 426 aaKnown RBP12.41□□□□□ -0.42
SYNE2-224ENST00000557024 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
SYNE2-224ENST00000557024 FAM155AB1AL88 458 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-224ENST00000557024 VPS33BQ9H267 617 aa12.4□□□□□ -0.42
SYNE2-224ENST00000557024 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.42
SYNE2-224ENST00000557024 RRP7AQ9Y3A4 280 aaKnown RBP12.4□□□□□ -0.42
SYNE2-224ENST00000557024 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-224ENST00000557024 CDHR2Q9BYE9 1310 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 TRPA1O75762 1119 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 NTSR2O95665 410 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 NUBP1P53384 320 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-224ENST00000557024 TNIP1Q15025 636 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 DPP8Q6V1X1 898 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-224ENST00000557024 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 RTFDC1Q9BY42 306 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-224ENST00000557024 RNF186Q9NXI6 227 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 SAGE1Q9NXZ1 904 aa12.39□□□□□ -0.43
SYNE2-224ENST00000557024 CNOT7Q9UIV1 285 aaKnown RBP12.39□□□□□ -0.43
SYNE2-224ENST00000557024 MYL6BP14649 208 aa12.38□□□□□ -0.43
SYNE2-224ENST00000557024 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
SYNE2-224ENST00000557024 RGMBQ6NW40 437 aa12.38□□□□□ -0.43
SYNE2-224ENST00000557024 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
SYNE2-224ENST00000557024 ABCC4O15439 1325 aa12.37□□□□□ -0.43
SYNE2-224ENST00000557024 H7C1D1 291 aa12.37□□□□□ -0.43
SYNE2-224ENST00000557024 ZNF157P51786 506 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-224ENST00000557024 TAF7Q15545 349 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-224ENST00000557024 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
SYNE2-224ENST00000557024 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
SYNE2-224ENST00000557024 MPNDQ8N594 471 aa12.37□□□□□ -0.43
SYNE2-224ENST00000557024 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-224ENST00000557024 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
SYNE2-224ENST00000557024 GBA2Q9HCG7 927 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-224ENST00000557024 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
SYNE2-224ENST00000557024 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
SYNE2-224ENST00000557024 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-224ENST00000557024 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
SYNE2-224ENST00000557024 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
SYNE2-224ENST00000557024 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
SYNE2-224ENST00000557024 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
SYNE2-224ENST00000557024 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
SYNE2-224ENST00000557024 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
SYNE2-224ENST00000557024 EGFRP00533 1210 aa12.35□□□□□ -0.43
SYNE2-224ENST00000557024 TBC1D10BQ4KMP7 808 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-224ENST00000557024 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
SYNE2-224ENST00000557024 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
SYNE2-224ENST00000557024 HTATSF1O43719 755 aaKnown RBP12.34□□□□□ -0.43
SYNE2-224ENST00000557024 BBOX1O75936 387 aa12.34□□□□□ -0.43
SYNE2-224ENST00000557024 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
SYNE2-224ENST00000557024 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
SYNE2-224ENST00000557024 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
SYNE2-224ENST00000557024 SP8Q8IXZ3 490 aa12.34□□□□□ -0.43
SYNE2-224ENST00000557024 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
SYNE2-224ENST00000557024 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-224ENST00000557024 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
SYNE2-224ENST00000557024 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
SYNE2-224ENST00000557024 PSMD14O00487 310 aa12.33□□□□□ -0.44
SYNE2-224ENST00000557024 SLC10A3P09131 477 aa12.33□□□□□ -0.44
SYNE2-224ENST00000557024 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-224ENST00000557024 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-224ENST00000557024 EVX2Q03828 476 aa12.33□□□□□ -0.44
SYNE2-224ENST00000557024 GSE1Q14687 1217 aa12.33□□□□□ -0.44
SYNE2-224ENST00000557024 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
SYNE2-224ENST00000557024 DPF2Q92785 391 aa12.33□□□□□ -0.44
SYNE2-224ENST00000557024 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
SYNE2-224ENST00000557024 CSRNP1Q96S65 589 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms