RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 HSP90B1P14625 803 aaKnown RBP29.15■■■□□ 2.26
TMEM260-214ENST00000556975 FAM9BQ8IZU0 186 aa29.15■■■□□ 2.26
TMEM260-214ENST00000556975 GPC2Q8N158 579 aa29.15■■■□□ 2.26
TMEM260-214ENST00000556975 SUPT20HQ8NEM7 779 aa29.15■■■□□ 2.26
TMEM260-214ENST00000556975 SALL2Q9Y467 1007 aaPredicted RBP29.15■■■□□ 2.26
TMEM260-214ENST00000556975 FANCIQ9NVI1 1328 aa29.15■■■□□ 2.26
TMEM260-214ENST00000556975 RTL5Q5HYW3 569 aaPredicted RBP29.14■■■□□ 2.26
TMEM260-214ENST00000556975 MPNDQ8N594 471 aa29.14■■■□□ 2.26
TMEM260-214ENST00000556975 TAF1DQ9H5J8 278 aaPredicted RBP29.14■■■□□ 2.26
TMEM260-214ENST00000556975 TAF1P21675 1872 aa29.13■■■□□ 2.25
TMEM260-214ENST00000556975 PCCAP05165 728 aaPredicted RBP29.13■■■□□ 2.25
TMEM260-214ENST00000556975 EIF6P56537 245 aaKnown RBP29.13■■■□□ 2.25
TMEM260-214ENST00000556975 DPP8Q6V1X1 898 aaPredicted RBP29.13■■■□□ 2.25
TMEM260-214ENST00000556975 CWC25Q9NXE8 425 aaPredicted RBP29.13■■■□□ 2.25
TMEM260-214ENST00000556975 MAP3K2Q9Y2U5 619 aa29.13■■■□□ 2.25
TMEM260-214ENST00000556975 PI4KAP2A4QPH2 592 aa29.12■■■□□ 2.25
TMEM260-214ENST00000556975 SLC4A2P04920 1241 aa29.12■■■□□ 2.25
TMEM260-214ENST00000556975 PI4KAP1Q8N8J0 262 aa29.12■■■□□ 2.25
TMEM260-214ENST00000556975 KLRG1Q96E93 195 aa29.12■■■□□ 2.25
TMEM260-214ENST00000556975 PPIP5K2O43314 1243 aa29.11■■■□□ 2.25
TMEM260-214ENST00000556975 CHADLQ6NUI6 762 aa29.11■■■□□ 2.25
TMEM260-214ENST00000556975 HACL1Q9UJ83 578 aa29.11■■■□□ 2.25
TMEM260-214ENST00000556975 VAMP4O75379 141 aa29.1■■■□□ 2.25
TMEM260-214ENST00000556975 NIM1KQ8IY84 436 aa29.1■■■□□ 2.25
TMEM260-214ENST00000556975 CELF1Q92879 486 aaKnown RBP29.1■■■□□ 2.25
TMEM260-214ENST00000556975 POTEIP0CG38 1075 aa29.09■■■□□ 2.25
TMEM260-214ENST00000556975 POTEJP0CG39 1038 aa29.09■■■□□ 2.25
TMEM260-214ENST00000556975 AOC3Q16853 763 aa29.09■■■□□ 2.25
TMEM260-214ENST00000556975 G2E3Q7L622 706 aa29.09■■■□□ 2.25
TMEM260-214ENST00000556975 IGKV5-2P06315 115 aa29.08■■■□□ 2.25
TMEM260-214ENST00000556975 KIAA2012Q0VF49 1180 aa29.08■■■□□ 2.25
TMEM260-214ENST00000556975 LDHDQ86WU2 507 aa29.08■■■□□ 2.25
TMEM260-214ENST00000556975 LRRC37AA6NMS7 1700 aa29.08■■■□□ 2.25
TMEM260-214ENST00000556975 CACNA1FO60840 1977 aa29.08■■■□□ 2.25
TMEM260-214ENST00000556975 PCNTO95613 3336 aa29.07■■■□□ 2.24
TMEM260-214ENST00000556975 PDE8AO60658 829 aa29.07■■■□□ 2.24
TMEM260-214ENST00000556975 EXOSC9Q06265 439 aaKnown RBP29.07■■■□□ 2.24
TMEM260-214ENST00000556975 SPINK5Q9NQ38 1064 aaPredicted RBP29.07■■■□□ 2.24
TMEM260-214ENST00000556975 CDHR2Q9BYE9 1310 aa29.06■■■□□ 2.24
TMEM260-214ENST00000556975 EPHX2P34913 555 aa29.06■■■□□ 2.24
TMEM260-214ENST00000556975 RPS8P62241 208 aaKnown RBP29.06■■■□□ 2.24
TMEM260-214ENST00000556975 NEXNQ0ZGT2 675 aa29.06■■■□□ 2.24
TMEM260-214ENST00000556975 PNMA8AQ86V59 439 aaPredicted RBP29.06■■■□□ 2.24
TMEM260-214ENST00000556975 ZNRF3Q9ULT6 936 aa29.06■■■□□ 2.24
TMEM260-214ENST00000556975 GJA3Q9Y6H8 435 aa29.05■■■□□ 2.24
TMEM260-214ENST00000556975 FLIIQ13045 1269 aa29.04■■■□□ 2.24
TMEM260-214ENST00000556975 CCDC152Q4G0S7 254 aa29.04■■■□□ 2.24
TMEM260-214ENST00000556975 MYH16Q9H6N6 1097 aa29.04■■■□□ 2.24
TMEM260-214ENST00000556975 JARID2Q92833 1246 aaPredicted RBP29.03■■■□□ 2.24
TMEM260-214ENST00000556975 DUOX1Q9NRD9 1551 aa29.03■■■□□ 2.24
TMEM260-214ENST00000556975 COL4A1P02462 1669 aa29.02■■■□□ 2.24
TMEM260-214ENST00000556975 NEURL1BA8MQ27 555 aa29.02■■■□□ 2.24
TMEM260-214ENST00000556975 JMYQ8N9B5 988 aa29.02■■■□□ 2.24
TMEM260-214ENST00000556975 NSFL1CQ9UNZ2 370 aaKnown RBP29.02■■■□□ 2.24
TMEM260-214ENST00000556975 ADAMTSL1Q8N6G6 1762 aa29.01■■■□□ 2.23
TMEM260-214ENST00000556975 ZNF521Q96K83 1311 aa29.01■■■□□ 2.23
TMEM260-214ENST00000556975 SCNN1DP51172 638 aa29.01■■■□□ 2.23
TMEM260-214ENST00000556975 CXCL9Q07325 125 aa29.01■■■□□ 2.23
TMEM260-214ENST00000556975 EAPPQ56P03 285 aaPredicted RBP29.01■■■□□ 2.23
TMEM260-214ENST00000556975 SEC31BQ9NQW1 1179 aa29.01■■■□□ 2.23
TMEM260-214ENST00000556975 LMOD1P29536 600 aaPredicted RBP29■■■□□ 2.23
TMEM260-214ENST00000556975 CWF19L2Q2TBE0 894 aaKnown RBP29■■■□□ 2.23
TMEM260-214ENST00000556975 H7C1W4 665 aa28.99■■■□□ 2.23
TMEM260-214ENST00000556975 GPSM2P81274 684 aa28.99■■■□□ 2.23
TMEM260-214ENST00000556975 FKBP5Q13451 457 aaPredicted RBP28.99■■■□□ 2.23
TMEM260-214ENST00000556975 PASKQ96RG2 1323 aa28.98■■■□□ 2.23
TMEM260-214ENST00000556975 LTBP1Q14766 1721 aa28.98■■■□□ 2.23
TMEM260-214ENST00000556975 ITGBL1O95965 494 aaPredicted RBP28.98■■■□□ 2.23
TMEM260-214ENST00000556975 WASHC4Q2M389 1173 aa28.98■■■□□ 2.23
TMEM260-214ENST00000556975 DNAAF4Q8WXU2 420 aa28.98■■■□□ 2.23
TMEM260-214ENST00000556975 PODXL2Q9NZ53 605 aa28.98■■■□□ 2.23
TMEM260-214ENST00000556975 POLLQ9UGP5 575 aa28.98■■■□□ 2.23
TMEM260-214ENST00000556975 EPS15P42566 896 aa28.97■■■□□ 2.23
TMEM260-214ENST00000556975 CLEC11AQ9Y240 323 aa28.97■■■□□ 2.23
TMEM260-214ENST00000556975 CTSWP56202 376 aa28.96■■■□□ 2.23
TMEM260-214ENST00000556975 GCKRQ14397 625 aa28.96■■■□□ 2.23
TMEM260-214ENST00000556975 CIAPIN1Q6FI81 312 aa28.96■■■□□ 2.23
TMEM260-214ENST00000556975 TTLL11Q8NHH1 800 aa28.96■■■□□ 2.23
TMEM260-214ENST00000556975 C6orf229H3BNL8 230 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 TNIP1Q15025 636 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 LINS1Q8NG48 757 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 TBC1D16Q8TBP0 767 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 EYA3Q99504 573 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 CREBZFQ9NS37 354 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 GPRC5DQ9NZD1 345 aa28.95■■■□□ 2.22
TMEM260-214ENST00000556975 YDJCA8MPS7 323 aa28.94■■■□□ 2.22
TMEM260-214ENST00000556975 USP50Q70EL3 339 aaPredicted RBP28.94■■■□□ 2.22
TMEM260-214ENST00000556975 CCDC85AQ96PX6 553 aaPredicted RBP28.94■■■□□ 2.22
TMEM260-214ENST00000556975 RTL9Q8NET4 1388 aa28.93■■■□□ 2.22
TMEM260-214ENST00000556975 ANKRD18AQ8IVF6 992 aa28.93■■■□□ 2.22
TMEM260-214ENST00000556975 PLA2G12BQ9BX93 195 aa28.93■■■□□ 2.22
TMEM260-214ENST00000556975 RAD17O75943 681 aa28.92■■■□□ 2.22
TMEM260-214ENST00000556975 CASP7P55210 303 aa28.92■■■□□ 2.22
TMEM260-214ENST00000556975 UBE3BQ7Z3V4 1068 aa28.92■■■□□ 2.22
TMEM260-214ENST00000556975 CNTROBQ8N137 903 aa28.92■■■□□ 2.22
TMEM260-214ENST00000556975 CDC5LQ99459 802 aaKnown RBP28.92■■■□□ 2.22
TMEM260-214ENST00000556975 MYH3P11055 1940 aa28.92■■■□□ 2.22
TMEM260-214ENST00000556975 ADARB2Q9NS39 739 aaKnown RBP28.91■■■□□ 2.22
TMEM260-214ENST00000556975 RIMBP2O15034 1052 aa28.9■■■□□ 2.22
TMEM260-214ENST00000556975 GMPSP49915 693 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms