RNA–Protein interactions for RNA: ENST00000556903.2

FDPSP3-201, Transcript of farnesyl diphosphate synthase pseudogene 3, humanhuman

BASIC

Gene FDPSP3, Length 1,013 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP3-201ENST00000556903 ZNF34Q8IZ26 560 aa9.71□□□□□ -0.86
FDPSP3-201ENST00000556903 ZBTB38Q8NAP3 1195 aaPredicted RBP9.71□□□□□ -0.86
FDPSP3-201ENST00000556903 BCL2L12Q9HB09 334 aa9.71□□□□□ -0.86
FDPSP3-201ENST00000556903 ZBTB47Q9UFB7 747 aaPredicted RBP9.71□□□□□ -0.86
FDPSP3-201ENST00000556903 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
FDPSP3-201ENST00000556903 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
FDPSP3-201ENST00000556903 ARFGEF2Q9Y6D5 1785 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 KIF3CO14782 793 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 SERPINB2P05120 415 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 HSP90AB4PQ58FF6 505 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 SMC5Q8IY18 1101 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 SSH3Q8TE77 659 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 ZNF526Q8TF50 670 aaPredicted RBP9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 SUCLG2Q96I99 432 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 UTP14AQ9BVJ6 771 aaKnown RBP9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 DCTPP1Q9H773 170 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 NIP7Q9Y221 180 aaKnown RBP eCLIP9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 CDHR2Q9BYE9 1310 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 CARMIL3Q8ND23 1372 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 ANKRD31Q8N7Z5 1873 aa9.7□□□□□ -0.86
FDPSP3-201ENST00000556903 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 HSPA6P17066 643 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 CHRNA5P30532 468 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 CASP7P55210 303 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 POLA2Q14181 598 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 SETDB2Q96T68 719 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 PLA2G12BQ9BX93 195 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 NYXQ9GZU5 481 aa9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 TNRC6CQ9HCJ0 1690 aaKnown RBP9.69□□□□□ -0.86
FDPSP3-201ENST00000556903 UBN2Q6ZU65 1347 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 H0YIN7 160 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 IRS4O14654 1257 aaPredicted RBP9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 TOMM70O94826 608 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 RABL6Q3YEC7 729 aaPredicted RBP9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 SUSD4Q5VX71 490 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 C9orf131Q5VYM1 1079 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 FAM89AQ96GI7 184 aa9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
FDPSP3-201ENST00000556903 DICER1Q9UPY3 1922 aaKnown RBP9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 PDE6BP35913 854 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 NUCB1Q02818 461 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 ANKRD45Q5TZF3 282 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 KAZALD1Q96I82 304 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 BRIP1Q9BX63 1249 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 CCDC88AQ3V6T2 1871 aa9.67□□□□□ -0.86
FDPSP3-201ENST00000556903 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 COL11A2P13942 1736 aaPredicted RBP9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 PDE8AO60658 829 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 SURF6O75683 361 aaKnown RBP9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 NTSR2O95665 410 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 FOXO4P98177 505 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 RTL5Q5HYW3 569 aaPredicted RBP9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 EPHA10Q5JZY3 1008 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 TBC1D9BQ66K14 1250 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 TPTE2Q6XPS3 522 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 CHD1LQ86WJ1 897 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 NBPF5PQ86XG9 351 aaPredicted RBP9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 RNF181Q9P0P0 153 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 NOP58Q9Y2X3 529 aaKnown RBP9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 NUP98P52948 1817 aa9.66□□□□□ -0.86
FDPSP3-201ENST00000556903 FAM177BA6PVY3 158 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 NPHP1O15259 732 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 CSF1RP07333 972 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 LMNB1P20700 586 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 CTSWP56202 376 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 G3BP1Q13283 466 aaKnown RBP eCLIP9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 CCDC57Q2TAC2 916 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 PRR5LQ6MZQ0 368 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 CNBD1Q8NA66 436 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
FDPSP3-201ENST00000556903 TIAM2Q8IVF5 1701 aa9.65□□□□□ -0.87
FDPSP3-201ENST00000556903 APLP1P51693 650 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 ST5P78524 1137 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 IFIT5Q13325 482 aaKnown RBP9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 KIF1BPQ96EK5 621 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 NMRK2Q9NPI5 230 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 ANKRD36CQ5JPF3 1778 aa9.64□□□□□ -0.87
FDPSP3-201ENST00000556903 LTBP3Q9NS15 1303 aa9.63□□□□□ -0.87
FDPSP3-201ENST00000556903 ANKRD18BA2A2Z9 1011 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms