RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 PSAPL1Q6NUJ1 521 aa9.56□□□□□ -0.88
HIF1A-209ENST00000556827 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
HIF1A-209ENST00000556827 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
HIF1A-209ENST00000556827 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
HIF1A-209ENST00000556827 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
HIF1A-209ENST00000556827 MAP3K6O95382 1288 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 APBA3O96018 575 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 NID1P14543 1247 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 COL9A3Q14050 684 aaPredicted RBP9.55□□□□□ -0.88
HIF1A-209ENST00000556827 PCSK7Q16549 785 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 C16orf46Q6P387 395 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 FAM35AQ86V20 835 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 CXXC1Q9P0U4 656 aaPredicted RBP9.55□□□□□ -0.88
HIF1A-209ENST00000556827 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 USP20Q9Y2K6 914 aa9.55□□□□□ -0.88
HIF1A-209ENST00000556827 CARNS1A5YM72 827 aa9.54□□□□□ -0.88
HIF1A-209ENST00000556827 SASH3O75995 380 aa9.54□□□□□ -0.88
HIF1A-209ENST00000556827 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
HIF1A-209ENST00000556827 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
HIF1A-209ENST00000556827 CMTR1Q8N1G2 835 aaKnown RBP9.54□□□□□ -0.88
HIF1A-209ENST00000556827 C11orf16Q9NQ32 467 aa9.54□□□□□ -0.88
HIF1A-209ENST00000556827 ZFATQ9P243 1243 aa9.54□□□□□ -0.88
HIF1A-209ENST00000556827 OPLAHO14841 1288 aa9.53□□□□□ -0.88
HIF1A-209ENST00000556827 ADAM23O75077 832 aa9.53□□□□□ -0.88
HIF1A-209ENST00000556827 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
HIF1A-209ENST00000556827 CPB1P15086 417 aa9.53□□□□□ -0.88
HIF1A-209ENST00000556827 ARID4AP29374 1257 aaPredicted RBP9.53□□□□□ -0.88
HIF1A-209ENST00000556827 SAP130Q9H0E3 1048 aa9.53□□□□□ -0.88
HIF1A-209ENST00000556827 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
HIF1A-209ENST00000556827 XYLBO75191 536 aa9.52□□□□□ -0.89
HIF1A-209ENST00000556827 FURINP09958 794 aa9.52□□□□□ -0.89
HIF1A-209ENST00000556827 BRD2P25440 801 aaKnown RBP9.52□□□□□ -0.89
HIF1A-209ENST00000556827 MLLT1Q03111 559 aaPredicted RBP9.52□□□□□ -0.89
HIF1A-209ENST00000556827 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.89
HIF1A-209ENST00000556827 COL26A1Q96A83 441 aa9.52□□□□□ -0.89
HIF1A-209ENST00000556827 PTCD1O75127 700 aaKnown RBP9.51□□□□□ -0.89
HIF1A-209ENST00000556827 GATA4P43694 442 aa9.51□□□□□ -0.89
HIF1A-209ENST00000556827 NAA30Q147X3 362 aaPredicted RBP9.51□□□□□ -0.89
HIF1A-209ENST00000556827 ETFBKMTQ8IXQ9 262 aa9.51□□□□□ -0.89
HIF1A-209ENST00000556827 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
HIF1A-209ENST00000556827 LOC100996750A0A140TA64 210 aa9.5□□□□□ -0.89
HIF1A-209ENST00000556827 AFF1P51825 1210 aaKnown RBP9.5□□□□□ -0.89
HIF1A-209ENST00000556827 RAC1P63000 192 aa9.5□□□□□ -0.89
HIF1A-209ENST00000556827 CAPN12Q6ZSI9 719 aa9.5□□□□□ -0.89
HIF1A-209ENST00000556827 KRTAP4-6Q9BYQ5 205 aa9.5□□□□□ -0.89
HIF1A-209ENST00000556827 ATP2B4P23634 1241 aa9.49□□□□□ -0.89
HIF1A-209ENST00000556827 GPLD1P80108 840 aa9.49□□□□□ -0.89
HIF1A-209ENST00000556827 ELMSAN1Q6PJG2 1045 aa9.49□□□□□ -0.89
HIF1A-209ENST00000556827 RETREG2Q8NC44 543 aa9.49□□□□□ -0.89
HIF1A-209ENST00000556827 TRPM4Q8TD43 1214 aa9.49□□□□□ -0.89
HIF1A-209ENST00000556827 MYO15BQ96JP2 1530 aa9.48□□□□□ -0.89
HIF1A-209ENST00000556827 A0A0A0MRY4 1105 aa9.48□□□□□ -0.89
HIF1A-209ENST00000556827 EGFRP00533 1210 aa9.48□□□□□ -0.89
HIF1A-209ENST00000556827 EIF2AK2P19525 551 aaKnown RBP9.48□□□□□ -0.89
HIF1A-209ENST00000556827 GRIK4Q16099 956 aa9.48□□□□□ -0.89
HIF1A-209ENST00000556827 PERM1Q5SV97 790 aa9.48□□□□□ -0.89
HIF1A-209ENST00000556827 TNFRSF10BO14763 440 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 PSAPP07602 524 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 NRLP54845 237 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 DOC2BQ14184 412 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 HFE2Q6ZVN8 426 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
HIF1A-209ENST00000556827 FRRS1LQ9P0K9 344 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 KCNMB2Q9Y691 235 aa9.47□□□□□ -0.89
HIF1A-209ENST00000556827 TMEM88BA6NKF7 163 aa9.46□□□□□ -0.9
HIF1A-209ENST00000556827 ZBTB42B2RXF5 422 aa9.46□□□□□ -0.9
HIF1A-209ENST00000556827 ELNP15502 786 aa9.46□□□□□ -0.9
HIF1A-209ENST00000556827 DMRTC2Q8IXT2 367 aaPredicted RBP9.46□□□□□ -0.9
HIF1A-209ENST00000556827 PIK3R5Q8WYR1 880 aa9.46□□□□□ -0.9
HIF1A-209ENST00000556827 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
HIF1A-209ENST00000556827 PLAURQ03405 335 aa9.45□□□□□ -0.9
HIF1A-209ENST00000556827 FAM26DQ5JW98 314 aa9.45□□□□□ -0.9
HIF1A-209ENST00000556827 NSUN5Q96P11 429 aaKnown RBP9.45□□□□□ -0.9
HIF1A-209ENST00000556827 SMG9Q9H0W8 520 aaKnown RBP9.45□□□□□ -0.9
HIF1A-209ENST00000556827 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
HIF1A-209ENST00000556827 MMP20O60882 483 aa9.44□□□□□ -0.9
HIF1A-209ENST00000556827 ZAP70P43403 619 aa9.44□□□□□ -0.9
HIF1A-209ENST00000556827 TRIP4Q15650 581 aaPredicted RBP9.44□□□□□ -0.9
HIF1A-209ENST00000556827 WFDC8Q8IUA0 241 aa9.44□□□□□ -0.9
HIF1A-209ENST00000556827 ABTB2Q8N961 1025 aa9.44□□□□□ -0.9
HIF1A-209ENST00000556827 STIM2Q9P246 746 aa9.44□□□□□ -0.9
HIF1A-209ENST00000556827 C9orf172C9J069 976 aa9.43□□□□□ -0.9
HIF1A-209ENST00000556827 GHRHP01286 108 aa9.43□□□□□ -0.9
HIF1A-209ENST00000556827 MSL1Q68DK7 614 aa9.43□□□□□ -0.9
HIF1A-209ENST00000556827 NLRP13Q86W25 1043 aa9.43□□□□□ -0.9
HIF1A-209ENST00000556827 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
HIF1A-209ENST00000556827 FMR1NBQ8N0W7 255 aaPredicted RBP9.42□□□□□ -0.9
HIF1A-209ENST00000556827 GPR152Q8TDT2 470 aa9.42□□□□□ -0.9
HIF1A-209ENST00000556827 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
HIF1A-209ENST00000556827 LOC102724428A0A0B4J2F2 783 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 J3QW42 95 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 SOX18P35713 384 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 SIK1P57059 783 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 PLD4Q96BZ4 506 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 USP21Q9UK80 565 aa9.41□□□□□ -0.9
HIF1A-209ENST00000556827 FNDC3AQ9Y2H6 1198 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms