RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 GRAPQ13588 217 aa13.69□□□□□ -0.22
IFT43-212ENST00000556742 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
IFT43-212ENST00000556742 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
IFT43-212ENST00000556742 ATP6V0A2Q9Y487 856 aa13.69□□□□□ -0.22
IFT43-212ENST00000556742 PDE8AO60658 829 aa13.68□□□□□ -0.22
IFT43-212ENST00000556742 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
IFT43-212ENST00000556742 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
IFT43-212ENST00000556742 RTL5Q5HYW3 569 aaPredicted RBP13.68□□□□□ -0.22
IFT43-212ENST00000556742 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
IFT43-212ENST00000556742 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
IFT43-212ENST00000556742 COL4A1P02462 1669 aa13.67□□□□□ -0.22
IFT43-212ENST00000556742 GLTPD2A6NH11 291 aa13.67□□□□□ -0.22
IFT43-212ENST00000556742 GCKRQ14397 625 aa13.67□□□□□ -0.22
IFT43-212ENST00000556742 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
IFT43-212ENST00000556742 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
IFT43-212ENST00000556742 PTPRCP08575 1304 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 H7C1W4 665 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 CCDC152Q4G0S7 254 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
IFT43-212ENST00000556742 VPS33BQ9H267 617 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 CEP350Q5VT06 3117 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
IFT43-212ENST00000556742 IARSP41252 1262 aaKnown RBP13.65□□□□□ -0.22
IFT43-212ENST00000556742 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
IFT43-212ENST00000556742 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
IFT43-212ENST00000556742 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
IFT43-212ENST00000556742 RTFDC1Q9BY42 306 aaPredicted RBP13.65□□□□□ -0.22
IFT43-212ENST00000556742 F6X3S4 739 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 KIF3CO14782 793 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 CASP7P55210 303 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 CTSWP56202 376 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 UBE3BQ7Z3V4 1068 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
IFT43-212ENST00000556742 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 ZNF277Q9NRM2 450 aaPredicted RBP13.64□□□□□ -0.23
IFT43-212ENST00000556742 PSME4Q14997 1843 aa13.64□□□□□ -0.23
IFT43-212ENST00000556742 COL4A5P29400 1685 aa13.63□□□□□ -0.23
IFT43-212ENST00000556742 ALDH1L1O75891 902 aa13.63□□□□□ -0.23
IFT43-212ENST00000556742 BRPF1P55201 1214 aaPredicted RBP13.63□□□□□ -0.23
IFT43-212ENST00000556742 C1QTNF8P60827 252 aa13.63□□□□□ -0.23
IFT43-212ENST00000556742 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
IFT43-212ENST00000556742 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
IFT43-212ENST00000556742 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
IFT43-212ENST00000556742 MPNDQ8N594 471 aa13.63□□□□□ -0.23
IFT43-212ENST00000556742 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
IFT43-212ENST00000556742 NMRK2Q9NPI5 230 aa13.63□□□□□ -0.23
IFT43-212ENST00000556742 FZD9O00144 591 aa13.62□□□□□ -0.23
IFT43-212ENST00000556742 JDP2Q8WYK2 163 aa13.62□□□□□ -0.23
IFT43-212ENST00000556742 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
IFT43-212ENST00000556742 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
IFT43-212ENST00000556742 TOMM70O94826 608 aa13.61□□□□□ -0.23
IFT43-212ENST00000556742 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
IFT43-212ENST00000556742 CDC5LQ99459 802 aaKnown RBP13.61□□□□□ -0.23
IFT43-212ENST00000556742 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
IFT43-212ENST00000556742 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
IFT43-212ENST00000556742 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
IFT43-212ENST00000556742 GRM8O00222 908 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 CSF1RP07333 972 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 VEGFAP15692 232 aaPredicted RBP13.6□□□□□ -0.23
IFT43-212ENST00000556742 SLC4A10Q6U841 1118 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 ANKRD18AQ8IVF6 992 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
IFT43-212ENST00000556742 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
IFT43-212ENST00000556742 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
IFT43-212ENST00000556742 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
IFT43-212ENST00000556742 BCL2L13Q9BXK5 485 aa13.59□□□□□ -0.23
IFT43-212ENST00000556742 GREM2Q9H772 168 aa13.59□□□□□ -0.23
IFT43-212ENST00000556742 C9orf78Q9NZ63 289 aaPredicted RBP13.59□□□□□ -0.23
IFT43-212ENST00000556742 UTYO14607 1347 aa13.59□□□□□ -0.23
IFT43-212ENST00000556742 POTECB2RU33 542 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 DDNO94850 711 aaPredicted RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 RARSP54136 660 aaKnown RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 AOC3Q16853 763 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 GPC2Q8N158 579 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 BSDC1Q9NW68 430 aaPredicted RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
IFT43-212ENST00000556742 KIF16BQ96L93 1317 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 ZNF541Q9H0D2 1346 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 SCN9AQ15858 1988 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.24
IFT43-212ENST00000556742 IQCA1LA6NCM1 817 aa13.57□□□□□ -0.24
IFT43-212ENST00000556742 EIF6P56537 245 aaKnown RBP13.57□□□□□ -0.24
IFT43-212ENST00000556742 GPSM2P81274 684 aa13.57□□□□□ -0.24
IFT43-212ENST00000556742 FOXO4P98177 505 aa13.57□□□□□ -0.24
IFT43-212ENST00000556742 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
IFT43-212ENST00000556742 EYA3Q99504 573 aa13.57□□□□□ -0.24
IFT43-212ENST00000556742 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
IFT43-212ENST00000556742 ITGA6P23229 1130 aa13.56□□□□□ -0.24
IFT43-212ENST00000556742 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
IFT43-212ENST00000556742 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
IFT43-212ENST00000556742 TBC1D16Q8TBP0 767 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms