RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 DPP8Q6V1X1 898 aaPredicted RBP13.84□□□□□ -0.19
XRCC3-216ENST00000556682 NIM1KQ8IY84 436 aa13.84□□□□□ -0.19
XRCC3-216ENST00000556682 MPNDQ8N594 471 aa13.84□□□□□ -0.19
XRCC3-216ENST00000556682 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
XRCC3-216ENST00000556682 MAP3K2Q9Y2U5 619 aa13.84□□□□□ -0.19
XRCC3-216ENST00000556682 FANCIQ9NVI1 1328 aa13.84□□□□□ -0.19
XRCC3-216ENST00000556682 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
XRCC3-216ENST00000556682 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
XRCC3-216ENST00000556682 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
XRCC3-216ENST00000556682 GPC2Q8N158 579 aa13.83□□□□□ -0.2
XRCC3-216ENST00000556682 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.2
XRCC3-216ENST00000556682 HACL1Q9UJ83 578 aa13.83□□□□□ -0.2
XRCC3-216ENST00000556682 TIAM2Q8IVF5 1701 aa13.82□□□□□ -0.2
XRCC3-216ENST00000556682 RTFDC1Q9BY42 306 aaPredicted RBP13.82□□□□□ -0.2
XRCC3-216ENST00000556682 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
XRCC3-216ENST00000556682 CACNA1SQ13698 1873 aa13.82□□□□□ -0.2
XRCC3-216ENST00000556682 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
XRCC3-216ENST00000556682 SNED1Q8TER0 1413 aa13.81□□□□□ -0.2
XRCC3-216ENST00000556682 ANKRD36CQ5JPF3 1778 aa13.81□□□□□ -0.2
XRCC3-216ENST00000556682 PDE8AO60658 829 aa13.81□□□□□ -0.2
XRCC3-216ENST00000556682 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
XRCC3-216ENST00000556682 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
XRCC3-216ENST00000556682 CCDC152Q4G0S7 254 aa13.81□□□□□ -0.2
XRCC3-216ENST00000556682 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
XRCC3-216ENST00000556682 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
XRCC3-216ENST00000556682 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
XRCC3-216ENST00000556682 WDR90Q96KV7 1748 aa13.81□□□□□ -0.2
XRCC3-216ENST00000556682 VAMP4O75379 141 aa13.8□□□□□ -0.2
XRCC3-216ENST00000556682 RPS8P62241 208 aaKnown RBP13.8□□□□□ -0.2
XRCC3-216ENST00000556682 FLIIQ13045 1269 aa13.8□□□□□ -0.2
XRCC3-216ENST00000556682 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-216ENST00000556682 AOC3Q16853 763 aa13.8□□□□□ -0.2
XRCC3-216ENST00000556682 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
XRCC3-216ENST00000556682 CELF1Q92879 486 aaKnown RBP13.8□□□□□ -0.2
XRCC3-216ENST00000556682 TAF1DQ9H5J8 278 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-216ENST00000556682 NSFL1CQ9UNZ2 370 aaKnown RBP13.8□□□□□ -0.2
XRCC3-216ENST00000556682 GJA3Q9Y6H8 435 aa13.8□□□□□ -0.2
XRCC3-216ENST00000556682 EPHX2P34913 555 aa13.79□□□□□ -0.2
XRCC3-216ENST00000556682 EAPPQ56P03 285 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-216ENST00000556682 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
XRCC3-216ENST00000556682 IGKV5-2P06315 115 aa13.78□□□□□ -0.2
XRCC3-216ENST00000556682 KIAA2012Q0VF49 1180 aa13.78□□□□□ -0.2
XRCC3-216ENST00000556682 G2E3Q7L622 706 aa13.78□□□□□ -0.2
XRCC3-216ENST00000556682 EYA3Q99504 573 aa13.78□□□□□ -0.2
XRCC3-216ENST00000556682 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
XRCC3-216ENST00000556682 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
XRCC3-216ENST00000556682 NEURL1BA8MQ27 555 aa13.77□□□□□ -0.21
XRCC3-216ENST00000556682 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
XRCC3-216ENST00000556682 TNIP1Q15025 636 aa13.77□□□□□ -0.21
XRCC3-216ENST00000556682 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
XRCC3-216ENST00000556682 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
XRCC3-216ENST00000556682 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.21
XRCC3-216ENST00000556682 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
XRCC3-216ENST00000556682 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
XRCC3-216ENST00000556682 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
XRCC3-216ENST00000556682 DNAJC5GQ8N7S2 189 aa13.76□□□□□ -0.21
XRCC3-216ENST00000556682 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-216ENST00000556682 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
XRCC3-216ENST00000556682 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-216ENST00000556682 SEC31BQ9NQW1 1179 aa13.76□□□□□ -0.21
XRCC3-216ENST00000556682 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
XRCC3-216ENST00000556682 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 CTSWP56202 376 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 CXCL9Q07325 125 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 GCKRQ14397 625 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 KLRG1Q96E93 195 aa13.75□□□□□ -0.21
XRCC3-216ENST00000556682 CCDC85AQ96PX6 553 aaPredicted RBP13.75□□□□□ -0.21
XRCC3-216ENST00000556682 G3V3G9 751 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 H7C1W4 665 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 GPSM2P81274 684 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 HTRA3P83110 453 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 USP50Q70EL3 339 aaPredicted RBP13.74□□□□□ -0.21
XRCC3-216ENST00000556682 UBE3BQ7Z3V4 1068 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 ZC3H12CQ9C0D7 883 aaKnown RBP13.74□□□□□ -0.21
XRCC3-216ENST00000556682 PODXL2Q9NZ53 605 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 POLLQ9UGP5 575 aa13.74□□□□□ -0.21
XRCC3-216ENST00000556682 E9PSI1 815 aa13.73□□□□□ -0.21
XRCC3-216ENST00000556682 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
XRCC3-216ENST00000556682 SCNN1DP51172 638 aa13.73□□□□□ -0.21
XRCC3-216ENST00000556682 TBC1D16Q8TBP0 767 aa13.73□□□□□ -0.21
XRCC3-216ENST00000556682 GGA1Q9UJY5 639 aa13.73□□□□□ -0.21
XRCC3-216ENST00000556682 SCN4AP35499 1836 aa13.73□□□□□ -0.21
XRCC3-216ENST00000556682 ZNF521Q96K83 1311 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 RAD17O75943 681 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 UFL1O94874 794 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 EPS15P42566 896 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 PLA2G12BQ9BX93 195 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
XRCC3-216ENST00000556682 BSDC1Q9NW68 430 aaPredicted RBP13.72□□□□□ -0.21
XRCC3-216ENST00000556682 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 LAMB2P55268 1798 aa13.72□□□□□ -0.21
XRCC3-216ENST00000556682 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms