RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 G2E3Q7L622 706 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 SYNE4Q8N205 404 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 PI4KAP1Q8N8J0 262 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 CCDC191Q8NCU4 936 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-205ENST00000556310 LRRC37AA6NMS7 1700 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 TAF1P21675 1872 aa14.76□□□□□ -0.05
SLIRP-205ENST00000556310 ZNF428Q96B54 188 aa14.76□□□□□ -0.05
SLIRP-205ENST00000556310 FAM89AQ96GI7 184 aa14.76□□□□□ -0.05
SLIRP-205ENST00000556310 CWC25Q9NXE8 425 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-205ENST00000556310 ABCC4O15439 1325 aa14.75□□□□□ -0.05
SLIRP-205ENST00000556310 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-205ENST00000556310 SLFN5Q08AF3 891 aa14.75□□□□□ -0.05
SLIRP-205ENST00000556310 NEXNQ0ZGT2 675 aa14.75□□□□□ -0.05
SLIRP-205ENST00000556310 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-205ENST00000556310 CC2D2BQ6DHV5 1058 aa14.75□□□□□ -0.05
SLIRP-205ENST00000556310 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-205ENST00000556310 ZNF526Q8TF50 670 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-205ENST00000556310 PCCAP05165 728 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-205ENST00000556310 IGKV5-2P06315 115 aa14.74□□□□□ -0.05
SLIRP-205ENST00000556310 HSP90B1P14625 803 aaKnown RBP14.74□□□□□ -0.05
SLIRP-205ENST00000556310 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
SLIRP-205ENST00000556310 OLFM4Q6UX06 510 aa14.74□□□□□ -0.05
SLIRP-205ENST00000556310 RTKN2Q8IZC4 609 aa14.74□□□□□ -0.05
SLIRP-205ENST00000556310 IRS4O14654 1257 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-205ENST00000556310 SF3B3Q15393 1217 aaKnown RBP14.73□□□□□ -0.05
SLIRP-205ENST00000556310 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
SLIRP-205ENST00000556310 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-205ENST00000556310 DDX46Q7L014 1031 aaKnown RBP14.73□□□□□ -0.05
SLIRP-205ENST00000556310 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
SLIRP-205ENST00000556310 KDM2BQ8NHM5 1336 aa14.72□□□□□ -0.05
SLIRP-205ENST00000556310 CDHR2Q9BYE9 1310 aa14.72□□□□□ -0.05
SLIRP-205ENST00000556310 NEURL1BA8MQ27 555 aa14.72□□□□□ -0.05
SLIRP-205ENST00000556310 GRAPQ13588 217 aa14.72□□□□□ -0.05
SLIRP-205ENST00000556310 GRAPLQ8TC17 118 aaPredicted RBP14.72□□□□□ -0.05
SLIRP-205ENST00000556310 PSMD1Q99460 953 aa14.72□□□□□ -0.05
SLIRP-205ENST00000556310 COL4A1P02462 1669 aa14.71□□□□□ -0.05
SLIRP-205ENST00000556310 CWF19L2Q2TBE0 894 aaKnown RBP14.71□□□□□ -0.05
SLIRP-205ENST00000556310 TRMT2AQ8IZ69 625 aaKnown RBP14.71□□□□□ -0.05
SLIRP-205ENST00000556310 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
SLIRP-205ENST00000556310 ATP6V0A2Q9Y487 856 aa14.71□□□□□ -0.05
SLIRP-205ENST00000556310 LTBP1Q14766 1721 aa14.7□□□□□ -0.06
SLIRP-205ENST00000556310 WDR90Q96KV7 1748 aa14.7□□□□□ -0.06
SLIRP-205ENST00000556310 BBOX1O75936 387 aa14.7□□□□□ -0.06
SLIRP-205ENST00000556310 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
SLIRP-205ENST00000556310 TMC4Q7Z404 712 aa14.7□□□□□ -0.06
SLIRP-205ENST00000556310 LINS1Q8NG48 757 aa14.7□□□□□ -0.06
SLIRP-205ENST00000556310 DUOX1Q9NRD9 1551 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 KIF3CO14782 793 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 PDE8AO60658 829 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 SLC51AQ86UW1 340 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
SLIRP-205ENST00000556310 NMRK2Q9NPI5 230 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 ZNF277Q9NRM2 450 aaPredicted RBP14.69□□□□□ -0.06
SLIRP-205ENST00000556310 SPEF2Q9C093 1822 aa14.69□□□□□ -0.06
SLIRP-205ENST00000556310 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
SLIRP-205ENST00000556310 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
SLIRP-205ENST00000556310 GCKRQ14397 625 aa14.68□□□□□ -0.06
SLIRP-205ENST00000556310 CCDC152Q4G0S7 254 aa14.68□□□□□ -0.06
SLIRP-205ENST00000556310 SP8Q8IXZ3 490 aa14.68□□□□□ -0.06
SLIRP-205ENST00000556310 COL4A5P29400 1685 aa14.68□□□□□ -0.06
SLIRP-205ENST00000556310 F6X3S4 739 aa14.67□□□□□ -0.06
SLIRP-205ENST00000556310 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-205ENST00000556310 CTSWP56202 376 aa14.67□□□□□ -0.06
SLIRP-205ENST00000556310 C1QTNF8P60827 252 aa14.67□□□□□ -0.06
SLIRP-205ENST00000556310 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
SLIRP-205ENST00000556310 MRPL50Q8N5N7 158 aaKnown RBP14.67□□□□□ -0.06
SLIRP-205ENST00000556310 JARID2Q92833 1246 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-205ENST00000556310 CELF1Q92879 486 aaKnown RBP14.67□□□□□ -0.06
SLIRP-205ENST00000556310 RTL9Q8NET4 1388 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 H7C1W4 665 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 BEND3Q5T5X7 828 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 DPY19L2Q6NUT2 758 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 SSH1Q8WYL5 1049 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 SCN4AP35499 1836 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 PTPRCP08575 1304 aa14.66□□□□□ -0.06
SLIRP-205ENST00000556310 CASP7P55210 303 aa14.65□□□□□ -0.06
SLIRP-205ENST00000556310 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
SLIRP-205ENST00000556310 DPP8Q6V1X1 898 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-205ENST00000556310 SUPT20HQ8NEM7 779 aa14.65□□□□□ -0.06
SLIRP-205ENST00000556310 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
SLIRP-205ENST00000556310 RTFDC1Q9BY42 306 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-205ENST00000556310 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-205ENST00000556310 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-205ENST00000556310 RPS8P62241 208 aaKnown RBP14.64□□□□□ -0.07
SLIRP-205ENST00000556310 MPNDQ8N594 471 aa14.64□□□□□ -0.07
SLIRP-205ENST00000556310 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
SLIRP-205ENST00000556310 VPS33BQ9H267 617 aa14.64□□□□□ -0.07
SLIRP-205ENST00000556310 SEC31BQ9NQW1 1179 aa14.64□□□□□ -0.07
SLIRP-205ENST00000556310 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
SLIRP-205ENST00000556310 ZNF541Q9H0D2 1346 aa14.64□□□□□ -0.07
SLIRP-205ENST00000556310 FZD9O00144 591 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 PPIP5K2O43314 1243 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 SLC4A10Q6U841 1118 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 LARGE2Q8N3Y3 721 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 TTLL11Q8NHH1 800 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 CCDC85AQ96PX6 553 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms