RNA–Protein interactions for RNA: ENST00000556146.1

CDK2-209, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 911 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-209ENST00000556146 RRP1P56182 461 aaKnown RBP12.78□□□□□ -0.36
CDK2-209ENST00000556146 CTSWP56202 376 aa12.78□□□□□ -0.36
CDK2-209ENST00000556146 FOXO4P98177 505 aa12.78□□□□□ -0.36
CDK2-209ENST00000556146 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
CDK2-209ENST00000556146 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
CDK2-209ENST00000556146 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
CDK2-209ENST00000556146 ARFGEF1Q9Y6D6 1849 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.37
CDK2-209ENST00000556146 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 PANK1Q8TE04 598 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
CDK2-209ENST00000556146 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
CDK2-209ENST00000556146 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 MEIS3Q99687 375 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 UTRNP46939 3433 aa12.77□□□□□ -0.37
CDK2-209ENST00000556146 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.37
CDK2-209ENST00000556146 ZBTB7BO15156 539 aaPredicted RBP12.76□□□□□ -0.37
CDK2-209ENST00000556146 GNAI3P08754 354 aa12.76□□□□□ -0.37
CDK2-209ENST00000556146 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
CDK2-209ENST00000556146 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
CDK2-209ENST00000556146 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
CDK2-209ENST00000556146 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
CDK2-209ENST00000556146 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
CDK2-209ENST00000556146 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
CDK2-209ENST00000556146 COL4A1P02462 1669 aa12.75□□□□□ -0.37
CDK2-209ENST00000556146 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
CDK2-209ENST00000556146 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
CDK2-209ENST00000556146 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
CDK2-209ENST00000556146 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
CDK2-209ENST00000556146 SLX4Q8IY92 1834 aa12.75□□□□□ -0.37
CDK2-209ENST00000556146 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
CDK2-209ENST00000556146 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDK2-209ENST00000556146 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
CDK2-209ENST00000556146 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
CDK2-209ENST00000556146 GRAPQ13588 217 aa12.74□□□□□ -0.37
CDK2-209ENST00000556146 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
CDK2-209ENST00000556146 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
CDK2-209ENST00000556146 GRAPLQ8TC17 118 aaPredicted RBP12.74□□□□□ -0.37
CDK2-209ENST00000556146 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
CDK2-209ENST00000556146 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
CDK2-209ENST00000556146 GREM2Q9H772 168 aa12.74□□□□□ -0.37
CDK2-209ENST00000556146 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
CDK2-209ENST00000556146 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 CHD4Q14839 1912 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 BBOX1O75936 387 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 TMC4Q7Z404 712 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
CDK2-209ENST00000556146 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
CDK2-209ENST00000556146 TAF1P21675 1872 aa12.72□□□□□ -0.37
CDK2-209ENST00000556146 GNAI2P04899 355 aa12.72□□□□□ -0.37
CDK2-209ENST00000556146 MTX1Q13505 466 aa12.72□□□□□ -0.37
CDK2-209ENST00000556146 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
CDK2-209ENST00000556146 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
CDK2-209ENST00000556146 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
CDK2-209ENST00000556146 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
CDK2-209ENST00000556146 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
CDK2-209ENST00000556146 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
CDK2-209ENST00000556146 ITGA6P23229 1130 aa12.71□□□□□ -0.37
CDK2-209ENST00000556146 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.37
CDK2-209ENST00000556146 SOGA3Q5TF21 947 aa12.71□□□□□ -0.37
CDK2-209ENST00000556146 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
CDK2-209ENST00000556146 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
CDK2-209ENST00000556146 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
CDK2-209ENST00000556146 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
CDK2-209ENST00000556146 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
CDK2-209ENST00000556146 ANKRD18BA2A2Z9 1011 aa12.7□□□□□ -0.38
CDK2-209ENST00000556146 RFX5P48382 616 aaPredicted RBP12.7□□□□□ -0.38
CDK2-209ENST00000556146 IFIT5Q13325 482 aaKnown RBP12.7□□□□□ -0.38
CDK2-209ENST00000556146 GRIPAP1Q4V328 841 aa12.7□□□□□ -0.38
CDK2-209ENST00000556146 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
CDK2-209ENST00000556146 SP8Q8IXZ3 490 aa12.7□□□□□ -0.38
CDK2-209ENST00000556146 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
CDK2-209ENST00000556146 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
CDK2-209ENST00000556146 LTBP1Q14766 1721 aa12.69□□□□□ -0.38
CDK2-209ENST00000556146 C21orf2O43822 256 aa12.69□□□□□ -0.38
CDK2-209ENST00000556146 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
CDK2-209ENST00000556146 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
CDK2-209ENST00000556146 LTBP3Q9NS15 1303 aa12.68□□□□□ -0.38
CDK2-209ENST00000556146 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
CDK2-209ENST00000556146 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
CDK2-209ENST00000556146 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
CDK2-209ENST00000556146 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
CDK2-209ENST00000556146 ATP8B2P98198 1209 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 POLA2Q14181 598 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 RTKN2Q8IZC4 609 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
CDK2-209ENST00000556146 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 DUOX1Q9NRD9 1551 aa12.67□□□□□ -0.38
CDK2-209ENST00000556146 A0A1B0GUL6 1792 aa12.66□□□□□ -0.38
CDK2-209ENST00000556146 NFKBIEO00221 500 aa12.66□□□□□ -0.38
CDK2-209ENST00000556146 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
CDK2-209ENST00000556146 AAMPQ13685 434 aa12.66□□□□□ -0.38
CDK2-209ENST00000556146 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
CDK2-209ENST00000556146 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
CDK2-209ENST00000556146 SSH3Q8TE77 659 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms