RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SNX21Q969T3 373 aa17.95■□□□□ 0.46
VPS33B-205ENST00000556096 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
VPS33B-205ENST00000556096 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
VPS33B-205ENST00000556096 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
VPS33B-205ENST00000556096 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
VPS33B-205ENST00000556096 PSDA5PKW4 1024 aaPredicted RBP17.93■□□□□ 0.46
VPS33B-205ENST00000556096 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
VPS33B-205ENST00000556096 CSF1RP07333 972 aa17.93■□□□□ 0.46
VPS33B-205ENST00000556096 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
VPS33B-205ENST00000556096 FBXO3Q9UK99 471 aa17.93■□□□□ 0.46
VPS33B-205ENST00000556096 CHMP3Q9Y3E7 222 aa17.93■□□□□ 0.46
VPS33B-205ENST00000556096 CIAO1O76071 339 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 TFCP2Q12800 502 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 TNNI3KQ59H18 835 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
VPS33B-205ENST00000556096 GPR108Q9NPR9 543 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 FPGT-TNNI3KV9GXZ4 949 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 PHF14O94880 888 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 IL15P40933 162 aaPredicted RBP17.92■□□□□ 0.46
VPS33B-205ENST00000556096 ATG9AQ7Z3C6 839 aa17.92■□□□□ 0.46
VPS33B-205ENST00000556096 EYA2O00167 538 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 GNPATO15228 680 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 GPTP24298 496 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 R3HDM1Q15032 1099 aaKnown RBP17.91■□□□□ 0.46
VPS33B-205ENST00000556096 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 AK7Q96M32 723 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 UBR3Q6ZT12 1888 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
VPS33B-205ENST00000556096 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
VPS33B-205ENST00000556096 MAP4K4O95819 1239 aaPredicted RBP17.9■□□□□ 0.46
VPS33B-205ENST00000556096 CCDC57Q2TAC2 916 aa17.9■□□□□ 0.46
VPS33B-205ENST00000556096 RC3H1Q5TC82 1133 aaKnown RBP17.9■□□□□ 0.46
VPS33B-205ENST00000556096 TLR7Q9NYK1 1049 aaKnown RBP17.9■□□□□ 0.46
VPS33B-205ENST00000556096 TFCP2L1Q9NZI6 479 aa17.9■□□□□ 0.46
VPS33B-205ENST00000556096 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
VPS33B-205ENST00000556096 CAMTA2O94983 1202 aa17.89■□□□□ 0.46
VPS33B-205ENST00000556096 SLC15A2Q16348 729 aa17.89■□□□□ 0.46
VPS33B-205ENST00000556096 HSCBQ8IWL3 235 aa17.89■□□□□ 0.46
VPS33B-205ENST00000556096 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.46
VPS33B-205ENST00000556096 ATP5JP18859 108 aa17.89■□□□□ 0.45
VPS33B-205ENST00000556096 RABEP1Q15276 862 aa17.89■□□□□ 0.45
VPS33B-205ENST00000556096 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
VPS33B-205ENST00000556096 UBN2Q6ZU65 1347 aa17.88■□□□□ 0.45
VPS33B-205ENST00000556096 RGL2O15211 777 aa17.88■□□□□ 0.45
VPS33B-205ENST00000556096 PARP10Q53GL7 1025 aa17.88■□□□□ 0.45
VPS33B-205ENST00000556096 DBNLQ9UJU6 430 aaKnown RBP17.88■□□□□ 0.45
VPS33B-205ENST00000556096 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
VPS33B-205ENST00000556096 SGSM2O43147 1006 aa17.87■□□□□ 0.45
VPS33B-205ENST00000556096 PDE8AO60658 829 aa17.87■□□□□ 0.45
VPS33B-205ENST00000556096 TTLL11Q8NHH1 800 aa17.87■□□□□ 0.45
VPS33B-205ENST00000556096 HIP1O00291 1037 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 CTSWP56202 376 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 IFIT5Q13325 482 aaKnown RBP17.86■□□□□ 0.45
VPS33B-205ENST00000556096 RUFY2Q8WXA3 655 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 ZNF594Q96JF6 807 aaPredicted RBP17.86■□□□□ 0.45
VPS33B-205ENST00000556096 MCCP23508 829 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 LRRC24Q50LG9 513 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 CLEC4GQ6UXB4 293 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 IL17RAQ96F46 866 aa17.86■□□□□ 0.45
VPS33B-205ENST00000556096 PNPLA7Q6ZV29 1317 aa17.85■□□□□ 0.45
VPS33B-205ENST00000556096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.85■□□□□ 0.45
VPS33B-205ENST00000556096 BOLA2Q9H3K6 86 aa17.85■□□□□ 0.45
VPS33B-205ENST00000556096 ANO2Q9NQ90 1003 aa17.85■□□□□ 0.45
VPS33B-205ENST00000556096 CEP126Q9P2H0 1117 aa17.85■□□□□ 0.45
VPS33B-205ENST00000556096 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
VPS33B-205ENST00000556096 ANAPC15P60006 121 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
VPS33B-205ENST00000556096 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
VPS33B-205ENST00000556096 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
VPS33B-205ENST00000556096 TAF7LQ5H9L4 462 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 COL23A1Q86Y22 540 aaPredicted RBP17.84■□□□□ 0.45
VPS33B-205ENST00000556096 PUS3Q9BZE2 481 aaKnown RBP17.84■□□□□ 0.45
VPS33B-205ENST00000556096 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
VPS33B-205ENST00000556096 MYH3P11055 1940 aa17.83■□□□□ 0.44
VPS33B-205ENST00000556096 ZNF609O15014 1411 aa17.83■□□□□ 0.44
VPS33B-205ENST00000556096 ANKRD18BA2A2Z9 1011 aa17.83■□□□□ 0.44
VPS33B-205ENST00000556096 IL27Q8NEV9 243 aa17.83■□□□□ 0.44
VPS33B-205ENST00000556096 IL25Q9H293 177 aa17.83■□□□□ 0.44
VPS33B-205ENST00000556096 AKAP2Q9Y2D5 859 aa17.83■□□□□ 0.44
VPS33B-205ENST00000556096 ITGA6P23229 1130 aa17.82■□□□□ 0.44
VPS33B-205ENST00000556096 TICAM2Q86XR7 235 aa17.82■□□□□ 0.44
VPS33B-205ENST00000556096 HAUS7Q99871 368 aa17.82■□□□□ 0.44
VPS33B-205ENST00000556096 GREM2Q9H772 168 aa17.82■□□□□ 0.44
VPS33B-205ENST00000556096 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
VPS33B-205ENST00000556096 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
VPS33B-205ENST00000556096 LSG1Q9H089 658 aaKnown RBP17.81■□□□□ 0.44
VPS33B-205ENST00000556096 SNRKQ9NRH2 765 aa17.81■□□□□ 0.44
VPS33B-205ENST00000556096 SRP68Q9UHB9 627 aaKnown RBP17.81■□□□□ 0.44
VPS33B-205ENST00000556096 NIP7Q9Y221 180 aaKnown RBP eCLIP17.81■□□□□ 0.44
VPS33B-205ENST00000556096 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
VPS33B-205ENST00000556096 K7ELQ4 463 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms