RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
TMEM55B-206ENST00000556093 COL4A1P02462 1669 aa16.53■□□□□ 0.24
TMEM55B-206ENST00000556093 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.24
TMEM55B-206ENST00000556093 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
TMEM55B-206ENST00000556093 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
TMEM55B-206ENST00000556093 CWF19L2Q2TBE0 894 aaKnown RBP16.52■□□□□ 0.24
TMEM55B-206ENST00000556093 SLC51AQ86UW1 340 aa16.52■□□□□ 0.24
TMEM55B-206ENST00000556093 MIER1Q8N108 512 aa16.52■□□□□ 0.24
TMEM55B-206ENST00000556093 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
TMEM55B-206ENST00000556093 LTBP1Q14766 1721 aa16.51■□□□□ 0.23
TMEM55B-206ENST00000556093 COL4A5P29400 1685 aa16.51■□□□□ 0.23
TMEM55B-206ENST00000556093 PDE8AO60658 829 aa16.5■□□□□ 0.23
TMEM55B-206ENST00000556093 DPY19L2Q6NUT2 758 aa16.5■□□□□ 0.23
TMEM55B-206ENST00000556093 SP8Q8IXZ3 490 aa16.5■□□□□ 0.23
TMEM55B-206ENST00000556093 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
TMEM55B-206ENST00000556093 SCN4AP35499 1836 aa16.49■□□□□ 0.23
TMEM55B-206ENST00000556093 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
TMEM55B-206ENST00000556093 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
TMEM55B-206ENST00000556093 CDCA7LQ96GN5 454 aa16.49■□□□□ 0.23
TMEM55B-206ENST00000556093 TOMM70O94826 608 aa16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 GCKRQ14397 625 aa16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 CELF1Q92879 486 aaKnown RBP16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 RTFDC1Q9BY42 306 aaPredicted RBP16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 RRAGCQ9HB90 399 aa16.48■□□□□ 0.23
TMEM55B-206ENST00000556093 ZNF541Q9H0D2 1346 aa16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 CTSWP56202 376 aa16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 TRMT2AQ8IZ69 625 aaKnown RBP16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 JDP2Q8WYK2 163 aa16.47■□□□□ 0.23
TMEM55B-206ENST00000556093 F6X3S4 739 aa16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 H7C1W4 665 aa16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 FZD9O00144 591 aa16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 VEGFAP15692 232 aaPredicted RBP16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 MPNDQ8N594 471 aa16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
TMEM55B-206ENST00000556093 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 RPS8P62241 208 aaKnown RBP16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 BEND3Q5T5X7 828 aa16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 L3MBTL3Q96JM7 780 aaPredicted RBP16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
TMEM55B-206ENST00000556093 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 CASP7P55210 303 aa16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 AOC3Q16853 763 aa16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 PLA2G12BQ9BX93 195 aa16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 PTPRCP08575 1304 aa16.44■□□□□ 0.22
TMEM55B-206ENST00000556093 CEP350Q5VT06 3117 aa16.43■□□□□ 0.22
TMEM55B-206ENST00000556093 POTECB2RU33 542 aa16.43■□□□□ 0.22
TMEM55B-206ENST00000556093 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
TMEM55B-206ENST00000556093 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
TMEM55B-206ENST00000556093 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
TMEM55B-206ENST00000556093 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
TMEM55B-206ENST00000556093 IQCA1LA6NCM1 817 aa16.42■□□□□ 0.22
TMEM55B-206ENST00000556093 ALDH1L1O75891 902 aa16.42■□□□□ 0.22
TMEM55B-206ENST00000556093 EIF6P56537 245 aaKnown RBP16.42■□□□□ 0.22
TMEM55B-206ENST00000556093 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
TMEM55B-206ENST00000556093 GPC2Q8N158 579 aa16.42■□□□□ 0.22
TMEM55B-206ENST00000556093 GREM2Q9H772 168 aa16.42■□□□□ 0.22
TMEM55B-206ENST00000556093 HSPA6P17066 643 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 GPSM2P81274 684 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 FSTL1Q12841 308 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 SLC4A10Q6U841 1118 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 BCL2L13Q9BXK5 485 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 SRCIN1Q9C0H9 1055 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 NSFL1CQ9UNZ2 370 aaKnown RBP16.41■□□□□ 0.22
TMEM55B-206ENST00000556093 GRM8O00222 908 aa16.4■□□□□ 0.22
TMEM55B-206ENST00000556093 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
TMEM55B-206ENST00000556093 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
TMEM55B-206ENST00000556093 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
TMEM55B-206ENST00000556093 ADAMTSL1Q8N6G6 1762 aa16.4■□□□□ 0.22
TMEM55B-206ENST00000556093 A0A1B0GUL6 1792 aa16.39■□□□□ 0.21
TMEM55B-206ENST00000556093 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
TMEM55B-206ENST00000556093 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
TMEM55B-206ENST00000556093 EYA3Q99504 573 aa16.39■□□□□ 0.21
TMEM55B-206ENST00000556093 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 CSF1RP07333 972 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 WASHC4Q2M389 1173 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 ANKIB1Q9P2G1 1089 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 POLLQ9UGP5 575 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 XDHP47989 1333 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 PSME4Q14997 1843 aa16.38■□□□□ 0.21
TMEM55B-206ENST00000556093 UFL1O94874 794 aa16.37■□□□□ 0.21
TMEM55B-206ENST00000556093 ITGA6P23229 1130 aa16.37■□□□□ 0.21
TMEM55B-206ENST00000556093 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms