RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 DCTPP1Q9H773 170 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
ATXN3-235ENST00000556082 LCE2BO14633 110 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 DGAT1O75907 488 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 CSB-PGBD3P0DP91 1061 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 RPIAP49247 311 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 TRIM67Q6ZTA4 783 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 CHD1LQ86WJ1 897 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 IFNL2Q8IZJ0 200 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
ATXN3-235ENST00000556082 WDR17Q8IZU2 1322 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 RGPD2P0DJD1 1756 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-235ENST00000556082 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 Q3C1V9 767 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 BRICD5Q6PL45 260 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 PRDM11Q9NQV5 511 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 SLC27A5Q9Y2P5 690 aa10.37□□□□□ -0.75
ATXN3-235ENST00000556082 PXDNLA1KZ92 1463 aa10.36□□□□□ -0.75
ATXN3-235ENST00000556082 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
ATXN3-235ENST00000556082 GNAI3P08754 354 aa10.36□□□□□ -0.75
ATXN3-235ENST00000556082 CEP85Q6P2H3 762 aa10.36□□□□□ -0.75
ATXN3-235ENST00000556082 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
ATXN3-235ENST00000556082 DBF4Q9UBU7 674 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-235ENST00000556082 KDM3BQ7LBC6 1761 aa10.36□□□□□ -0.75
ATXN3-235ENST00000556082 CACNA1FO60840 1977 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 ATP10DQ9P241 1426 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 MEGF6O75095 1541 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 KCNQ3O43525 872 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 CD46P15529 392 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 FKBP5Q13451 457 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-235ENST00000556082 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 NHSL1Q5SYE7 1610 aa10.35□□□□□ -0.75
ATXN3-235ENST00000556082 IBTKQ9P2D0 1353 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-235ENST00000556082 KDM6AO15550 1401 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-235ENST00000556082 F6X3S4 739 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 CYP27B1O15528 508 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 GDF9O60383 454 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 HMMRO75330 724 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 GNAI2P04899 355 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 USP46P62068 366 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 ZNF790Q6PG37 636 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 MEIS3Q99687 375 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 C1orf115Q9H7X2 142 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 COL5A2P05997 1499 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-235ENST00000556082 MRC1P22897 1456 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 RGPD5Q99666 1765 aa10.34□□□□□ -0.75
ATXN3-235ENST00000556082 ERVV-2B6SEH9 535 aa10.33□□□□□ -0.76
ATXN3-235ENST00000556082 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
ATXN3-235ENST00000556082 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
ATXN3-235ENST00000556082 ANKRD45Q5TZF3 282 aa10.33□□□□□ -0.76
ATXN3-235ENST00000556082 SLC4A10Q6U841 1118 aa10.33□□□□□ -0.76
ATXN3-235ENST00000556082 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-235ENST00000556082 ZCRB1Q8TBF4 217 aaKnown RBP10.33□□□□□ -0.76
ATXN3-235ENST00000556082 SIPA1L3O60292 1781 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-235ENST00000556082 IL2RBP14784 551 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 EIF2S2P20042 333 aaKnown RBP10.32□□□□□ -0.76
ATXN3-235ENST00000556082 ATP8B2P98198 1209 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 TOM1L2Q6ZVM7 507 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATXN3-235ENST00000556082 CHPF2Q9P2E5 772 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 PKD1L3Q7Z443 1732 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 PCDH11XQ9BZA7 1347 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 PCDH11YQ9BZA8 1340 aa10.32□□□□□ -0.76
ATXN3-235ENST00000556082 EIF5BO60841 1220 aaKnown RBP10.31□□□□□ -0.76
ATXN3-235ENST00000556082 KDM4AO75164 1064 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 ALDH1L1O75891 902 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 PLA2G2CQ5R387 149 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 BEND3Q5T5X7 828 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 KSR2Q6VAB6 950 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 DNAAF4Q8WXU2 420 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 PHAXQ9H814 394 aaKnown RBP10.31□□□□□ -0.76
ATXN3-235ENST00000556082 HDAC5Q9UQL6 1122 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 NOP58Q9Y2X3 529 aaKnown RBP10.31□□□□□ -0.76
ATXN3-235ENST00000556082 LTBP4Q8N2S1 1624 aa10.31□□□□□ -0.76
ATXN3-235ENST00000556082 AHDC1Q5TGY3 1603 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-235ENST00000556082 SNRPA1P09661 255 aaKnown RBP10.3□□□□□ -0.76
ATXN3-235ENST00000556082 CLCN1P35523 988 aa10.3□□□□□ -0.76
ATXN3-235ENST00000556082 CABP4P57796 275 aa10.3□□□□□ -0.76
ATXN3-235ENST00000556082 EVA1CP58658 441 aa10.3□□□□□ -0.76
ATXN3-235ENST00000556082 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
ATXN3-235ENST00000556082 PI4KAP2A4QPH2 592 aa10.29□□□□□ -0.76
ATXN3-235ENST00000556082 DDX58O95786 925 aaKnown RBP10.29□□□□□ -0.76
ATXN3-235ENST00000556082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATXN3-235ENST00000556082 NPM2Q86SE8 214 aaKnown RBP10.29□□□□□ -0.76
ATXN3-235ENST00000556082 PI4KAP1Q8N8J0 262 aa10.29□□□□□ -0.76
ATXN3-235ENST00000556082 FMNL2Q96PY5 1086 aa10.29□□□□□ -0.76
ATXN3-235ENST00000556082 UPF2Q9HAU5 1272 aaKnown RBP10.29□□□□□ -0.76
ATXN3-235ENST00000556082 FCF1Q9Y324 198 aaKnown RBP10.29□□□□□ -0.76
ATXN3-235ENST00000556082 ERBB4Q15303 1308 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms