RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SH3TC1Q8TE82 1336 aa18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 GMPSP49915 693 aaPredicted RBP18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 LMOD3Q0VAK6 560 aa18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 GRAPQ13588 217 aa18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 HSP90AB3PQ58FF7 597 aa18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 GRAPLQ8TC17 118 aaPredicted RBP18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ADARB2Q9NS39 739 aaKnown RBP18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 TRMT112Q9UI30 125 aaKnown RBP18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ABT1Q9ULW3 272 aaKnown RBP18.82■□□□□ 0.6
CHMP4BP1-201ENST00000556017 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
CHMP4BP1-201ENST00000556017 POLR2AP24928 1970 aaKnown RBP18.81■□□□□ 0.6
CHMP4BP1-201ENST00000556017 SHTN1A0MZ66 631 aa18.81■□□□□ 0.6
CHMP4BP1-201ENST00000556017 DPP8Q6V1X1 898 aaPredicted RBP18.81■□□□□ 0.6
CHMP4BP1-201ENST00000556017 MPNDQ8N594 471 aa18.81■□□□□ 0.6
CHMP4BP1-201ENST00000556017 SCN9AQ15858 1988 aa18.81■□□□□ 0.6
CHMP4BP1-201ENST00000556017 CYP4F22Q6NT55 531 aa18.8■□□□□ 0.6
CHMP4BP1-201ENST00000556017 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
CHMP4BP1-201ENST00000556017 TLL2Q9Y6L7 1015 aa18.8■□□□□ 0.6
CHMP4BP1-201ENST00000556017 RAD17O75943 681 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 DDX46Q7L014 1031 aaKnown RBP18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 PLBD2Q8NHP8 589 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 TRPM4Q8TD43 1214 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 CELF1Q92879 486 aaKnown RBP18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 AIDAQ96BJ3 306 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 CAPNS2Q96L46 248 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
CHMP4BP1-201ENST00000556017 SF3B3Q15393 1217 aaKnown RBP18.78■□□□□ 0.6
CHMP4BP1-201ENST00000556017 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
CHMP4BP1-201ENST00000556017 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
CHMP4BP1-201ENST00000556017 GLIS2Q9BZE0 524 aaPredicted RBP18.78■□□□□ 0.6
CHMP4BP1-201ENST00000556017 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 HOXB7P09629 217 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 MAP2K1Q02750 393 aaPredicted RBP18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 HDGFL1Q5TGJ6 251 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 ANKRD13DQ6ZTN6 518 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 SAPCD2Q86UD0 394 aa18.77■□□□□ 0.6
CHMP4BP1-201ENST00000556017 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
CHMP4BP1-201ENST00000556017 GPR101Q96P66 508 aaPredicted RBP18.76■□□□□ 0.59
CHMP4BP1-201ENST00000556017 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
CHMP4BP1-201ENST00000556017 AOC2O75106 756 aa18.75■□□□□ 0.59
CHMP4BP1-201ENST00000556017 TRIM28Q13263 835 aaKnown RBP18.75■□□□□ 0.59
CHMP4BP1-201ENST00000556017 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
CHMP4BP1-201ENST00000556017 KCNQ5Q9NR82 932 aa18.75■□□□□ 0.59
CHMP4BP1-201ENST00000556017 MBIPQ9NS73 344 aa18.75■□□□□ 0.59
CHMP4BP1-201ENST00000556017 POLLQ9UGP5 575 aa18.75■□□□□ 0.59
CHMP4BP1-201ENST00000556017 RTL9Q8NET4 1388 aa18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 EGFRP00533 1210 aa18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 TMC4Q7Z404 712 aa18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 TMX4Q9H1E5 349 aaPredicted RBP18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 CNOT7Q9UIV1 285 aaKnown RBP18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 PSME4Q14997 1843 aa18.74■□□□□ 0.59
CHMP4BP1-201ENST00000556017 CELF2O95319 508 aaKnown RBP18.73■□□□□ 0.59
CHMP4BP1-201ENST00000556017 GPSM2P81274 684 aa18.73■□□□□ 0.59
CHMP4BP1-201ENST00000556017 TNIP1Q15025 636 aa18.73■□□□□ 0.59
CHMP4BP1-201ENST00000556017 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
CHMP4BP1-201ENST00000556017 ZC3H15Q8WU90 426 aaKnown RBP18.73■□□□□ 0.59
CHMP4BP1-201ENST00000556017 CASP8AP2Q9UKL3 1982 aa18.72■□□□□ 0.59
CHMP4BP1-201ENST00000556017 PSMD14O00487 310 aa18.72■□□□□ 0.59
CHMP4BP1-201ENST00000556017 ECE1P42892 770 aa18.72■□□□□ 0.59
CHMP4BP1-201ENST00000556017 ABHD8Q96I13 439 aa18.72■□□□□ 0.59
CHMP4BP1-201ENST00000556017 DBNDD1Q9H9R9 158 aa18.72■□□□□ 0.59
CHMP4BP1-201ENST00000556017 HYPKQ9NX55 129 aa18.72■□□□□ 0.59
CHMP4BP1-201ENST00000556017 MAP2K2P36507 400 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 GRM1Q13255 1194 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 MICALL2Q8IY33 904 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 DPF2Q92785 391 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 HHIPL1Q96JK4 782 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 ZIC5Q96T25 663 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 PHAXQ9H814 394 aaKnown RBP18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 ZNF646O15015 1829 aaPredicted RBP18.71■□□□□ 0.59
CHMP4BP1-201ENST00000556017 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
CHMP4BP1-201ENST00000556017 PAXIP1Q6ZW49 1069 aaPredicted RBP18.7■□□□□ 0.58
CHMP4BP1-201ENST00000556017 SAMD7Q7Z3H4 446 aa18.7■□□□□ 0.58
CHMP4BP1-201ENST00000556017 SEC31BQ9NQW1 1179 aa18.7■□□□□ 0.58
CHMP4BP1-201ENST00000556017 TSKSQ9UJT2 592 aa18.7■□□□□ 0.58
CHMP4BP1-201ENST00000556017 IRS4O14654 1257 aaPredicted RBP18.69■□□□□ 0.58
CHMP4BP1-201ENST00000556017 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
CHMP4BP1-201ENST00000556017 PRKRIP1Q9H875 184 aaPredicted RBP18.69■□□□□ 0.58
CHMP4BP1-201ENST00000556017 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
CHMP4BP1-201ENST00000556017 RPS8P62241 208 aaKnown RBP18.68■□□□□ 0.58
CHMP4BP1-201ENST00000556017 CDC37L1Q7L3B6 337 aa18.68■□□□□ 0.58
CHMP4BP1-201ENST00000556017 USP48Q86UV5 1035 aa18.68■□□□□ 0.58
CHMP4BP1-201ENST00000556017 TBC1D16Q8TBP0 767 aa18.68■□□□□ 0.58
CHMP4BP1-201ENST00000556017 APAF1O14727 1248 aa18.67■□□□□ 0.58
CHMP4BP1-201ENST00000556017 ECE2O60344 883 aa18.67■□□□□ 0.58
CHMP4BP1-201ENST00000556017 DOK7Q18PE1 504 aa18.67■□□□□ 0.58
CHMP4BP1-201ENST00000556017 ZBTB38Q8NAP3 1195 aaPredicted RBP18.67■□□□□ 0.58
CHMP4BP1-201ENST00000556017 C8orf58Q8NAV2 365 aa18.67■□□□□ 0.58
CHMP4BP1-201ENST00000556017 PODXL2Q9NZ53 605 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms